#------------------------------------------------------------------------------ #$Date: 2010-01-30 13:59:17 +0000 (Sat, 30 Jan 2010) $ #$Revision: 966 $ #$URL: svn://www.crystallography.net/cod/cif/2/2206882.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2206882 _space_group_IT_number 15 _symmetry_space_group_name_Hall '-C 2yc' _symmetry_space_group_name_H-M 'C 1 2/c 1' _[local]_cod_cif_authors_sg_H-M 'C 2/c' loop_ _publ_author_name 'G. Usha' 'S. Selvanayagam' 'D. Velmurugan' 'K. Ravikumar' 'M. Poornachandran' _publ_section_title ; Hydrogen bonding in 1'-nitro-2'-phenyl-2',3',4',5',6',7'-hexahydro-1H-indole- 3-spiro-3'-1'H-pyrrolizin-2(3H)-one: molecular chains built from alternating R~2~^2^(18) and R~2~^2^(8) rings ; _journal_coeditor_code BT6738 _journal_issue 10 _journal_name_full 'Acta Crystallographica, Section E' _journal_page_first o3312 _journal_page_last o3314 _journal_volume 61 _journal_year 2005 _chemical_formula_iupac 'C20 H19 N3 O3' _chemical_formula_moiety 'C20 H19 N3 O3' _chemical_formula_sum 'C20 H19 N3 O3' _chemical_formula_weight 349.38 _chemical_name_systematic ; 1'-nitro-2'-phenyl-2',3',4',5',6',7'-hexahydro-1H-indole- 3-spiro-3'-1'H-pyrrolizin-2(3H)-one ; _symmetry_cell_setting monoclinic _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL-97 _cell_angle_alpha 90.00 _cell_angle_beta 102.941(2) _cell_angle_gamma 90.00 _cell_formula_units_Z 8 _cell_length_a 23.8981(15) _cell_length_b 7.5886(4) _cell_length_c 19.1370(10) _cell_measurement_reflns_used 7483 _cell_measurement_temperature 293(2) _cell_measurement_theta_max 26.53 _cell_measurement_theta_min 2.47 _cell_volume 3382.4(3) _computing_cell_refinement 'SAINT (Bruker, 2001)' _computing_data_collection 'SMART (Bruker, 2001)' _computing_data_reduction SAINT _computing_molecular_graphics ; ORTEP-3 (Farrugia, 1997) and PLATON (Spek, 2003) ; _computing_publication_material 'SHELXL97 and PARST (Nardelli, 1995)' _computing_structure_refinement 'SHELXL97 (Sheldrick, 1997)' _computing_structure_solution 'SHELXS97 (Sheldrick, 1997)' _diffrn_ambient_temperature 293(2) _diffrn_measured_fraction_theta_full 0.998 _diffrn_measured_fraction_theta_max 0.962 _diffrn_measurement_device 'Bruker SMART APEX' _diffrn_measurement_device_type 'CCD Area Detector' _diffrn_measurement_method \w _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0183 _diffrn_reflns_av_sigmaI/netI 0.0157 _diffrn_reflns_limit_h_max 31 _diffrn_reflns_limit_h_min -30 _diffrn_reflns_limit_k_max 9 _diffrn_reflns_limit_k_min -9 _diffrn_reflns_limit_l_max 25 _diffrn_reflns_limit_l_min -25 _diffrn_reflns_number 13982 _diffrn_reflns_theta_full 25.00 _diffrn_reflns_theta_max 27.99 _diffrn_reflns_theta_min 2.18 _diffrn_standards_decay_% 0 _diffrn_standards_number 0 _exptl_absorpt_coefficient_mu 0.094 _exptl_absorpt_correction_type none _exptl_crystal_colour colourless _exptl_crystal_density_diffrn 1.372 _exptl_crystal_density_method 'not measured' _exptl_crystal_description block _exptl_crystal_F_000 1472 _exptl_crystal_size_max 0.23 _exptl_crystal_size_mid 0.21 _exptl_crystal_size_min 0.20 _refine_diff_density_max 0.287 _refine_diff_density_min -0.287 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.026 _refine_ls_hydrogen_treatment constr _refine_ls_matrix_type full _refine_ls_number_parameters 235 _refine_ls_number_reflns 3921 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.026 _refine_ls_R_factor_all 0.0595 _refine_ls_R_factor_gt 0.0532 _refine_ls_shift/su_max 0.000 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w = 1/[\s^2^(Fo^2^)+(0.0985P)^2^+1.7117P] where P = (Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.1571 _refine_ls_wR_factor_ref 0.1641 _reflns_number_gt 3373 _reflns_number_total 3921 _reflns_threshold_expression I>2\s(I) _[local]_cod_data_source_file bt6738.cif loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, y, -z+1/2' 'x+1/2, y+1/2, z' '-x+1/2, y+1/2, -z+1/2' '-x, -y, -z' 'x, -y, z-1/2' '-x+1/2, -y+1/2, -z' 'x+1/2, -y+1/2, z-1/2' loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_type_symbol O1 0.07159(5) -0.02311(14) 0.06395(6) 0.0512(3) Uani d . 1 O O2 0.27239(8) 0.0114(4) 0.18077(14) 0.1251(9) Uani d . 1 O O3 0.25603(8) 0.2023(3) 0.25370(12) 0.1132(7) Uani d . 1 O N1 0.08805(5) 0.10616(17) 0.21380(6) 0.0436(3) Uani d . 1 N N10 0.00611(5) 0.20074(17) 0.05533(7) 0.0445(3) Uani d . 1 N H10 -0.0198 0.1601 0.0204 0.053 Uiso calc R 1 H N23 0.23993(6) 0.0986(2) 0.20513(10) 0.0650(5) Uani d . 1 N C2 0.08624(6) 0.22227(18) 0.15167(7) 0.0371(3) Uani d . 1 C C3 0.15020(5) 0.26078(18) 0.15331(7) 0.0367(3) Uani d . 1 C H3 0.1640 0.3385 0.1945 0.044 Uiso calc R 1 H C4 0.17707(6) 0.0804(2) 0.17411(8) 0.0440(3) Uani d . 1 C H4 0.1718 0.0078 0.1308 0.053 Uiso calc R 1 H C5 0.14116(7) -0.0006(2) 0.22439(10) 0.0518(4) Uani d . 1 C H5 0.1307 -0.1215 0.2087 0.062 Uiso calc R 1 H C6 0.16539(11) -0.0018(5) 0.30496(12) 0.1010(10) Uani d . 1 C H6A 0.1773 -0.1196 0.3216 0.121 Uiso calc R 1 H H6B 0.1981 0.0767 0.3177 0.121 Uiso calc R 1 H C7 0.11687(10) 0.0609(3) 0.33690(11) 0.0705(5) Uani d . 1 C H7A 0.0912 -0.0352 0.3419 0.085 Uiso calc R 1 H H7B 0.1311 0.1152 0.3834 0.085 Uiso calc R 1 H C8 0.08778(11) 0.1922(3) 0.28300(9) 0.0728(6) Uani d . 1 C H8A 0.0489 0.2147 0.2878 0.087 Uiso calc R 1 H H8B 0.1088 0.3025 0.2878 0.087 Uiso calc R 1 H C9 0.05515(6) 0.11579(18) 0.08476(7) 0.0397(3) Uani d . 1 C C11 0.00235(6) 0.3636(2) 0.08866(8) 0.0408(3) Uani d . 1 C C12 0.04882(6) 0.38338(18) 0.14655(7) 0.0380(3) Uani d . 1 C C13 0.05582(7) 0.5407(2) 0.18389(8) 0.0467(4) Uani d . 1 C H13 0.0871 0.5571 0.2222 0.056 Uiso calc R 1 H C14 0.01571(8) 0.6740(2) 0.16365(9) 0.0538(4) Uani d . 1 C H14 0.0201 0.7803 0.1884 0.065 Uiso calc R 1 H C15 -0.03060(8) 0.6494(2) 0.10691(10) 0.0584(4) Uani d . 1 C H15 -0.0574 0.7393 0.0944 0.070 Uiso calc R 1 H C16 -0.03812(7) 0.4937(2) 0.06811(9) 0.0535(4) Uani d . 1 C H16 -0.0693 0.4777 0.0297 0.064 Uiso calc R 1 H C17 0.16435(6) 0.3511(2) 0.08923(7) 0.0395(3) Uani d . 1 C C18 0.16935(7) 0.2624(2) 0.02743(8) 0.0492(4) Uani d . 1 C H18 0.1631 0.1414 0.0240 0.059 Uiso calc R 1 H C19 0.18361(8) 0.3528(3) -0.02910(10) 0.0614(5) Uani d . 1 C H19 0.1873 0.2916 -0.0699 0.074 Uiso calc R 1 H C20 0.19233(9) 0.5317(3) -0.02532(11) 0.0670(5) Uani d . 1 C H20 0.2019 0.5914 -0.0635 0.080 Uiso calc R 1 H C21 0.18695(9) 0.6217(3) 0.03473(11) 0.0682(5) Uani d . 1 C H21 0.1925 0.7430 0.0373 0.082 Uiso calc R 1 H C22 0.17320(8) 0.5322(2) 0.09184(10) 0.0532(4) Uani d . 1 C H22 0.1698 0.5944 0.1326 0.064 Uiso calc R 1 H loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 O1 0.0497(6) 0.0439(6) 0.0534(6) 0.0012(4) -0.0023(5) -0.0150(5) O2 0.0705(11) 0.176(2) 0.1421(18) 0.0555(13) 0.0530(12) 0.0464(17) O3 0.0751(11) 0.1170(15) 0.1170(15) -0.0209(10) -0.0428(10) 0.0099(13) N1 0.0408(6) 0.0482(7) 0.0400(6) -0.0025(5) 0.0052(5) 0.0009(5) N10 0.0353(6) 0.0497(7) 0.0422(6) -0.0014(5) -0.0046(5) -0.0104(5) N23 0.0434(8) 0.0808(11) 0.0687(10) 0.0111(7) 0.0081(7) 0.0333(9) C2 0.0340(6) 0.0399(7) 0.0346(6) -0.0027(5) 0.0018(5) -0.0052(5) C3 0.0328(6) 0.0391(7) 0.0346(6) -0.0006(5) 0.0000(5) -0.0033(5) C4 0.0415(7) 0.0453(8) 0.0422(7) 0.0049(6) 0.0029(6) 0.0008(6) C5 0.0523(9) 0.0420(8) 0.0613(10) 0.0029(6) 0.0134(7) 0.0091(7) C6 0.0788(15) 0.164(3) 0.0608(13) 0.0419(17) 0.0180(11) 0.0545(16) C7 0.0788(13) 0.0821(14) 0.0485(10) -0.0018(11) 0.0099(9) 0.0132(9) C8 0.0909(14) 0.0873(14) 0.0391(9) 0.0276(12) 0.0122(9) 0.0023(9) C9 0.0370(7) 0.0412(7) 0.0379(7) -0.0053(5) 0.0019(5) -0.0049(5) C11 0.0344(6) 0.0476(8) 0.0392(7) -0.0008(5) 0.0057(5) -0.0041(6) C12 0.0335(6) 0.0420(7) 0.0377(7) -0.0013(5) 0.0061(5) -0.0035(5) C13 0.0455(8) 0.0468(8) 0.0455(8) -0.0013(6) 0.0055(6) -0.0093(6) C14 0.0574(9) 0.0470(8) 0.0583(9) 0.0045(7) 0.0157(7) -0.0102(7) C15 0.0537(9) 0.0587(10) 0.0619(10) 0.0180(8) 0.0112(8) -0.0017(8) C16 0.0401(8) 0.0639(10) 0.0520(9) 0.0101(7) 0.0007(6) -0.0043(7) C17 0.0300(6) 0.0465(7) 0.0389(7) -0.0005(5) 0.0011(5) 0.0002(6) C18 0.0482(8) 0.0521(9) 0.0473(8) 0.0047(7) 0.0107(6) -0.0016(7) C19 0.0563(10) 0.0834(13) 0.0472(9) 0.0093(9) 0.0174(7) 0.0014(9) C20 0.0586(11) 0.0824(14) 0.0624(11) -0.0048(9) 0.0188(9) 0.0193(10) C21 0.0742(13) 0.0576(10) 0.0720(13) -0.0165(9) 0.0145(10) 0.0091(9) C22 0.0552(9) 0.0507(9) 0.0514(9) -0.0113(7) 0.0069(7) -0.0031(7) loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance _geom_bond_publ_flag O1 C9 1.222(2) Y O2 N23 1.191(3) Y O3 N23 1.213(3) Y N1 C2 1.473(2) Y N1 C5 1.481(2) Y N1 C8 1.478(2) Y N10 C9 1.346(2) Y N10 C11 1.403(2) Y N10 H10 0.8600 ? N23 C4 1.493(2) Y C2 C12 1.5048(19) ? C2 C3 1.5495(18) ? C2 C9 1.5552(18) ? C3 C17 1.5081(19) ? C3 C4 1.526(2) ? C3 H3 0.9800 ? C4 C5 1.553(2) ? C4 H4 0.9800 ? C5 C6 1.521(3) ? C5 H5 0.9800 ? C6 C7 1.504(3) ? C6 H6A 0.9700 ? C6 H6B 0.9700 ? C7 C8 1.490(3) ? C7 H7A 0.9700 ? C7 H7B 0.9700 ? C8 H8A 0.9700 ? C8 H8B 0.9700 ? C11 C16 1.376(2) ? C11 C12 1.3901(19) ? C12 C13 1.382(2) ? C13 C14 1.388(2) ? C13 H13 0.9300 ? C14 C15 1.379(3) ? C14 H14 0.9300 ? C15 C16 1.386(3) ? C15 H15 0.9300 ? C16 H16 0.9300 ? C17 C22 1.389(2) ? C17 C18 1.389(2) ? C18 C19 1.386(2) ? C18 H18 0.9300 ? C19 C20 1.373(3) ? C19 H19 0.9300 ? C20 C21 1.367(3) ? C20 H20 0.9300 ? C21 C22 1.387(3) ? C21 H21 0.9300 ? C22 H22 0.9300 ? loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_publ_flag C2 N1 C5 107.90(10) Y C2 N1 C8 117.00(10) Y C5 N1 C8 107.20(10) Y C9 N10 C11 111.73(11) ? C9 N10 H10 124.1 ? C11 N10 H10 124.1 ? O2 N23 O3 122.5(2) ? O2 N23 C4 118.6(2) ? O3 N23 C4 118.86(18) ? N1 C2 C12 116.64(11) ? N1 C2 C3 104.23(10) ? C12 C2 C3 114.65(11) ? N1 C2 C9 106.03(11) ? C12 C2 C9 101.61(11) ? C3 C2 C9 113.70(11) ? C17 C3 C4 117.51(12) ? C17 C3 C2 117.97(11) ? C4 C3 C2 101.06(11) ? C17 C3 H3 106.5 ? C4 C3 H3 106.5 ? C2 C3 H3 106.5 ? N23 C4 C3 110.38(13) ? N23 C4 C5 115.90(13) ? C3 C4 C5 104.96(12) ? N23 C4 H4 108.5 ? C3 C4 H4 108.5 ? C5 C4 H4 108.5 ? N1 C5 C6 105.19(15) ? N1 C5 C4 105.90(12) ? C6 C5 C4 119.52(17) ? N1 C5 H5 108.6 ? C6 C5 H5 108.6 ? C4 C5 H5 108.6 ? C7 C6 C5 104.89(18) ? C7 C6 H6A 110.8 ? C5 C6 H6A 110.8 ? C7 C6 H6B 110.8 ? C5 C6 H6B 110.8 ? H6A C6 H6B 108.8 ? C8 C7 C6 102.29(17) ? C8 C7 H7A 111.3 ? C6 C7 H7A 111.3 ? C8 C7 H7B 111.3 ? C6 C7 H7B 111.3 ? H7A C7 H7B 109.2 ? N1 C8 C7 103.28(17) ? N1 C8 H8A 111.1 ? C7 C8 H8A 111.1 ? N1 C8 H8B 111.1 ? C7 C8 H8B 111.1 ? H8A C8 H8B 109.1 ? O1 C9 N10 126.18(13) ? O1 C9 C2 125.95(13) ? N10 C9 C2 107.84(12) ? C16 C11 C12 122.37(14) ? C16 C11 N10 127.91(14) ? C12 C11 N10 109.65(12) ? C13 C12 C11 119.19(13) ? C13 C12 C2 131.82(13) ? C11 C12 C2 108.74(12) ? C12 C13 C14 119.28(14) ? C12 C13 H13 120.4 ? C14 C13 H13 120.4 ? C15 C14 C13 120.26(15) ? C15 C14 H14 119.9 ? C13 C14 H14 119.9 ? C14 C15 C16 121.49(16) ? C14 C15 H15 119.3 ? C16 C15 H15 119.3 ? C11 C16 C15 117.39(15) ? C11 C16 H16 121.3 ? C15 C16 H16 121.3 ? C22 C17 C18 117.94(15) ? C22 C17 C3 118.72(14) ? C18 C17 C3 123.34(13) ? C19 C18 C17 120.51(16) ? C19 C18 H18 119.7 ? C17 C18 H18 119.7 ? C20 C19 C18 120.60(18) ? C20 C19 H19 119.7 ? C18 C19 H19 119.7 ? C21 C20 C19 119.76(18) ? C21 C20 H20 120.1 ? C19 C20 H20 120.1 ? C20 C21 C22 120.06(18) ? C20 C21 H21 120.0 ? C22 C21 H21 120.0 ? C21 C22 C17 121.12(17) ? C21 C22 H22 119.4 ? C17 C22 H22 119.4 ? loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion _geom_torsion_publ_flag C5 N1 C2 C12 -159.01(12) ? C8 N1 C2 C12 -38.21(18) ? C5 N1 C2 C3 -31.50(10) Y C8 N1 C2 C3 89.28(16) ? C5 N1 C2 C9 88.76(13) ? C8 N1 C2 C9 -150.43(14) ? N1 C2 C3 C17 169.54(11) ? C12 C2 C3 C17 -61.76(16) ? C9 C2 C3 C17 54.55(16) ? N1 C2 C3 C4 40.00(10) Y C12 C2 C3 C4 168.70(11) ? C9 C2 C3 C4 -74.99(13) ? O2 N23 C4 C3 -127.59(18) ? O3 N23 C4 C3 51.8(2) ? O2 N23 C4 C5 113.3(2) ? O3 N23 C4 C5 -67.3(2) ? C17 C3 C4 N23 71.17(16) ? C2 C3 C4 N23 -158.99(13) ? C17 C3 C4 C5 -163.27(12) ? C2 C3 C4 C5 -33.40(10) Y C2 N1 C5 C6 137.50(17) ? C8 N1 C5 C6 10.7(2) Y C2 N1 C5 C4 10.1(2) Y C8 N1 C5 C4 -116.73(16) ? N23 C4 C5 N1 137.66(15) ? C3 C4 C5 N1 15.6(2) Y N23 C4 C5 C6 19.3(2) ? C3 C4 C5 C6 -102.70(19) ? N1 C5 C6 C7 15.2(3) Y C4 C5 C6 C7 133.9(2) ? C5 C6 C7 C8 -35.0(3) Y C2 N1 C8 C7 -154.05(16) ? C5 N1 C8 C7 -32.8(2) Y C6 C7 C8 N1 41.6(3) Y C11 N10 C9 O1 -175.23(14) ? C11 N10 C9 C2 6.76(16) ? N1 C2 C9 O1 -61.72(18) ? C12 C2 C9 O1 175.92(14) ? C3 C2 C9 O1 52.2(2) ? N1 C2 C9 N10 116.29(13) ? C12 C2 C9 N10 -6.06(15) ? C3 C2 C9 N10 -129.79(13) ? C9 N10 C11 C16 172.24(16) ? C9 N10 C11 C12 -4.67(18) ? C16 C11 C12 C13 -1.8(2) ? N10 C11 C12 C13 175.29(13) ? C16 C11 C12 C2 -176.78(14) ? N10 C11 C12 C2 0.33(16) ? N1 C2 C12 C13 74.5(2) ? C3 C2 C12 C13 -47.7(2) ? C9 C2 C12 C13 -170.75(16) ? N1 C2 C12 C11 -111.39(13) ? C3 C2 C12 C11 126.42(13) ? C9 C2 C12 C11 3.35(15) ? C11 C12 C13 C14 1.3(2) ? C2 C12 C13 C14 174.85(15) ? C12 C13 C14 C15 0.0(3) ? C13 C14 C15 C16 -0.9(3) ? C12 C11 C16 C15 1.0(3) ? N10 C11 C16 C15 -175.55(16) ? C14 C15 C16 C11 0.4(3) ? C4 C3 C17 C22 -140.90(14) ? C2 C3 C17 C22 97.67(16) ? C4 C3 C17 C18 38.75(18) ? C2 C3 C17 C18 -82.68(17) ? C22 C17 C18 C19 1.0(2) ? C3 C17 C18 C19 -178.69(14) ? C17 C18 C19 C20 -0.8(3) ? C18 C19 C20 C21 0.0(3) ? C19 C20 C21 C22 0.5(3) ? C20 C21 C22 C17 -0.4(3) ? C18 C17 C22 C21 -0.4(2) ? C3 C17 C22 C21 179.29(16) ? loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_site_symmetry_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA C6 H6B O3 . 0.97 2.26 3.001(4) 133 N10 H10 O1 5 0.86 2.08 2.929(2) 169 C20 H20 O2 7 0.93 2.58 3.285(3) 133 _cod_database_code 2206882