#------------------------------------------------------------------------------ #$Date: 2011-09-17 21:27:16 +0100 (Sat, 17 Sep 2011) $ #$Revision: 26029 $ #$URL: svn://www.crystallography.net/cod/cif/2/2206998.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2206998 loop_ _publ_author_name 'Zhu-Yan Zhang' 'Shan Gao' 'Li-Hua Huo' 'Jing-Gui Zhao' _publ_section_title ; 1-Carboxymethyl-3-hydroxypyridinium nitrate--3-hydroxypyridinium-1-acetate (1/1) ; _journal_coeditor_code JH6021 _journal_issue 10 _journal_name_full 'Acta Crystallographica, Section E' _journal_page_first o3487 _journal_page_last o3489 _journal_volume 61 _journal_year 2005 _chemical_formula_iupac 'C7 H8 N O3 +, N O3 -, C7 H7 N O3' _chemical_formula_moiety 'C7 H8 N O3 +, N O3 -, C7 H7 N O3' _chemical_formula_sum 'C14 H15 N3 O9' _chemical_formula_weight 369.29 _chemical_name_systematic ; 1-Carboxymethyl-3-hydroxypyridinium nitrate--3-hydroxypyridinium-1-acetate (1/1) ; _symmetry_cell_setting triclinic _symmetry_space_group_name_Hall '-P 1' _symmetry_space_group_name_H-M 'P -1' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _cell_angle_alpha 74.50(3) _cell_angle_beta 77.09(3) _cell_angle_gamma 88.37(3) _cell_formula_units_Z 2 _cell_length_a 7.0054(14) _cell_length_b 8.2661(17) _cell_length_c 14.445(3) _cell_measurement_reflns_used 5868 _cell_measurement_temperature 295(2) _cell_measurement_theta_max 26.42 _cell_measurement_theta_min 3.01 _cell_volume 785.2(3) _computing_cell_refinement RAPID-AUTO _computing_data_collection 'RAPID-AUTO (Rigaku, 1998)' _computing_data_reduction 'CrystalStructure (Rigaku/MSC, 2002)' _computing_molecular_graphics 'ORTEPII (Johnson, 1976)' _computing_publication_material SHELXL97 _computing_structure_refinement 'SHELXL97 (Sheldrick, 1997)' _computing_structure_solution 'SHELXS97 (Sheldrick, 1997)' _diffrn_ambient_temperature 295(2) _diffrn_detector_area_resol_mean 10 _diffrn_measured_fraction_theta_full 0.984 _diffrn_measured_fraction_theta_max 0.984 _diffrn_measurement_device_type 'Rigaku R-AXIS RAPID' _diffrn_measurement_method \w _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0197 _diffrn_reflns_av_sigmaI/netI 0.0270 _diffrn_reflns_limit_h_max 8 _diffrn_reflns_limit_h_min -8 _diffrn_reflns_limit_k_max 10 _diffrn_reflns_limit_k_min -10 _diffrn_reflns_limit_l_max 18 _diffrn_reflns_limit_l_min -18 _diffrn_reflns_number 6964 _diffrn_reflns_theta_full 26.49 _diffrn_reflns_theta_max 26.49 _diffrn_reflns_theta_min 3.00 _diffrn_standards_decay_% 0 _diffrn_standards_interval_count 0 _diffrn_standards_interval_time 0 _diffrn_standards_number 0 _exptl_absorpt_coefficient_mu 0.133 _exptl_absorpt_correction_T_max 0.976 _exptl_absorpt_correction_T_min 0.959 _exptl_absorpt_correction_type multi-scan _exptl_absorpt_process_details '(ABSCOR; Higashi, 1995)' _exptl_crystal_colour Colorless _exptl_crystal_density_diffrn 1.562 _exptl_crystal_description Prism _exptl_crystal_F_000 384 _exptl_crystal_size_max 0.39 _exptl_crystal_size_mid 0.26 _exptl_crystal_size_min 0.18 _refine_diff_density_max 0.444 _refine_diff_density_min -0.484 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.061 _refine_ls_hydrogen_treatment mixed _refine_ls_matrix_type full _refine_ls_number_parameters 244 _refine_ls_number_reflns 3206 _refine_ls_number_restraints 3 _refine_ls_restrained_S_all 1.061 _refine_ls_R_factor_all 0.0643 _refine_ls_R_factor_gt 0.0496 _refine_ls_shift/su_max 0.000 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w = 1/[\s^2^(Fo^2^)+(0.1204P)^2^+0.0897P] where P = (Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.1683 _refine_ls_wR_factor_ref 0.1807 _reflns_number_gt 2417 _reflns_number_total 3206 _reflns_threshold_expression I>2\s(I) _[local]_cod_data_source_file jh6021.cif _cod_depositor_comments ; The following automatic conversions were performed: '_symmetry_cell_setting' value 'Triclinic' changed to 'triclinic' according to '/home/saulius/struct/CIF-dictionaries/cif_core.dic' dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29. Automatic conversion script Id: cif_fix_enum 1527 2010-12-29 10:47:43Z saulius ; _cod_database_code 2206998 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, -y, -z' loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_type_symbol N1 0.1570(3) 0.5130(2) 0.88150(14) 0.0457(5) Uani d . 1 N N2 0.7792(3) 0.81471(19) 0.36826(11) 0.0369(4) Uani d . 1 N N3 0.6761(2) 0.18412(17) 0.88093(11) 0.0298(4) Uani d . 1 N O1 0.2039(3) 0.5897(3) 0.93462(16) 0.0917(8) Uani d . 1 O O2 0.0679(3) 0.5859(3) 0.81886(17) 0.0921(8) Uani d . 1 O O3 0.1928(3) 0.3654(2) 0.8883(2) 0.0863(8) Uani d . 1 O O4 0.6803(3) 0.58880(18) 0.54027(11) 0.0487(4) Uani d D 1 O O5 0.8277(3) 0.37764(17) 0.48665(12) 0.0528(5) Uani d . 1 O O6 0.3700(2) 1.07759(17) 0.35358(13) 0.0516(4) Uani d D 1 O O7 0.6636(3) 0.39480(16) 0.70618(10) 0.0504(4) Uani d . 1 O O8 0.6126(3) 0.61937(16) 0.76520(11) 0.0504(4) Uani d . 1 O O9 1.0834(2) -0.0822(2) 0.88579(15) 0.0584(5) Uani d D 1 O C1 0.6003(3) 0.8686(2) 0.36050(14) 0.0375(5) Uani d . 1 C C2 0.5519(3) 1.0319(2) 0.36105(14) 0.0364(4) Uani d . 1 C C3 0.6916(3) 1.1373(2) 0.37024(17) 0.0447(5) Uani d . 1 C C4 0.8744(4) 1.0779(3) 0.37873(19) 0.0526(6) Uani d . 1 C C5 0.9174(3) 0.9152(3) 0.37777(17) 0.0465(5) Uani d . 1 C C6 0.8243(4) 0.6381(2) 0.37083(15) 0.0455(5) Uani d . 1 C C7 0.7766(3) 0.5209(2) 0.47368(15) 0.0378(5) Uani d . 1 C C8 0.8559(3) 0.1281(2) 0.88375(14) 0.0348(4) Uani d . 1 C C9 0.8989(3) -0.0370(2) 0.88359(15) 0.0375(5) Uani d . 1 C C10 0.7510(3) -0.1416(2) 0.87995(15) 0.0388(5) Uani d . 1 C C11 0.5677(3) -0.0795(2) 0.87716(15) 0.0383(5) Uani d . 1 C C12 0.5311(3) 0.0840(2) 0.87748(14) 0.0342(4) Uani d . 1 C C13 0.6396(3) 0.3623(2) 0.87735(14) 0.0347(4) Uani d . 1 C C14 0.6384(3) 0.4689(2) 0.77397(14) 0.0325(4) Uani d . 1 C H1 0.5076 0.7957 0.3547 0.045 Uiso calc R 1 H H3 0.6627 1.2476 0.3707 0.054 Uiso calc R 1 H H4 0.9690 1.1483 0.3851 0.063 Uiso calc R 1 H H5 1.0406 0.8749 0.3836 0.056 Uiso calc R 1 H H6A 0.9625 0.6319 0.3422 0.055 Uiso calc R 1 H H6B 0.7506 0.6006 0.3305 0.055 Uiso calc R 1 H H8 0.9534 0.2002 0.8858 0.042 Uiso calc R 1 H H10 0.7756 -0.2526 0.8794 0.047 Uiso calc R 1 H H11 0.4677 -0.1491 0.8750 0.046 Uiso calc R 1 H H12 0.4070 0.1256 0.8753 0.041 Uiso calc R 1 H H13A 0.7403 0.4065 0.9012 0.042 Uiso calc R 1 H H13B 0.5143 0.3700 0.9209 0.042 Uiso calc R 1 H H15 0.672(5) 0.522(3) 0.5981(11) 0.073 Uiso d D 1 H H16 0.363(5) 1.1833(14) 0.332(2) 0.077 Uiso d D 1 H H17 1.097(5) -0.1873(15) 0.894(2) 0.088 Uiso d D 1 H loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 N1 0.0386(10) 0.0383(9) 0.0582(11) 0.0021(7) -0.0061(8) -0.0134(8) N2 0.0462(10) 0.0315(8) 0.0319(8) 0.0074(7) -0.0099(7) -0.0064(6) N3 0.0339(9) 0.0253(7) 0.0298(8) 0.0023(6) -0.0089(6) -0.0052(5) O1 0.0885(16) 0.1116(17) 0.0848(15) -0.0427(13) 0.0049(12) -0.0583(13) O2 0.0726(15) 0.1006(16) 0.0807(15) 0.0332(12) -0.0136(12) 0.0079(12) O3 0.0506(11) 0.0359(9) 0.181(2) 0.0104(7) -0.0378(13) -0.0357(11) O4 0.0689(11) 0.0376(8) 0.0369(8) 0.0161(7) -0.0121(7) -0.0064(6) O5 0.0753(12) 0.0300(8) 0.0592(10) 0.0133(7) -0.0262(8) -0.0143(6) O6 0.0427(9) 0.0338(8) 0.0751(11) 0.0063(6) -0.0210(8) -0.0034(7) O7 0.0854(12) 0.0310(7) 0.0342(8) 0.0032(7) -0.0147(8) -0.0063(6) O8 0.0729(11) 0.0264(7) 0.0541(10) 0.0115(6) -0.0228(8) -0.0085(6) O9 0.0395(9) 0.0426(8) 0.1017(14) 0.0125(7) -0.0259(8) -0.0269(8) C1 0.0446(12) 0.0290(9) 0.0395(11) -0.0002(8) -0.0150(9) -0.0051(7) C2 0.0401(11) 0.0315(9) 0.0355(10) 0.0025(7) -0.0106(8) -0.0037(7) C3 0.0534(14) 0.0281(9) 0.0554(13) 0.0018(8) -0.0180(10) -0.0113(8) C4 0.0515(14) 0.0421(12) 0.0695(16) -0.0037(9) -0.0247(12) -0.0139(10) C5 0.0409(12) 0.0485(12) 0.0500(13) 0.0063(9) -0.0155(10) -0.0091(9) C6 0.0616(14) 0.0363(11) 0.0404(11) 0.0155(9) -0.0129(10) -0.0136(8) C7 0.0448(12) 0.0296(9) 0.0454(11) 0.0077(8) -0.0201(9) -0.0132(8) C8 0.0349(11) 0.0311(9) 0.0407(10) -0.0001(7) -0.0131(8) -0.0093(7) C9 0.0360(11) 0.0341(10) 0.0438(11) 0.0043(7) -0.0119(8) -0.0109(8) C10 0.0447(12) 0.0262(9) 0.0470(11) 0.0035(7) -0.0123(9) -0.0108(8) C11 0.0392(11) 0.0350(10) 0.0418(11) -0.0048(8) -0.0110(8) -0.0101(8) C12 0.0308(10) 0.0351(9) 0.0374(10) 0.0016(7) -0.0115(8) -0.0077(7) C13 0.0422(11) 0.0285(9) 0.0375(10) 0.0053(7) -0.0148(8) -0.0111(7) C14 0.0327(10) 0.0267(9) 0.0386(10) 0.0018(7) -0.0113(8) -0.0070(7) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_publ_flag N2 C1 C2 120.53(18) yes N2 C5 C4 119.3(2) yes N2 C6 C7 113.26(16) yes N3 C8 C9 120.67(17) yes N3 C12 C11 119.52(17) yes N3 C13 C14 112.42(14) yes O1 N1 O3 122.9(2) yes O1 N1 O2 119.0(2) yes O3 N1 O2 118.2(2) yes O4 C7 C6 114.23(16) yes O5 C7 O4 126.4(2) yes O5 C7 C6 119.37(18) yes O6 C2 C3 123.78(18) yes O6 C2 C1 117.55(17) yes O7 C14 C13 117.32(15) yes O8 C14 O7 126.76(18) yes O8 C14 C13 115.92(16) yes O9 C9 C10 124.90(17) yes O9 C9 C8 116.67(17) yes C1 N2 C5 121.77(17) yes C1 N2 C6 119.24(17) yes C3 C2 C1 118.67(19) yes C4 C3 C2 119.48(18) yes C5 N2 C6 118.94(18) yes C5 C4 C3 120.3(2) yes C8 N3 C12 121.56(15) yes C8 N3 C13 118.63(15) yes C12 N3 C13 119.76(16) yes C10 C9 C8 118.43(18) yes C11 C10 C9 119.24(17) yes C12 C11 C10 120.58(17) yes N2 C1 H1 119.7 no N2 C5 H5 120.4 no N2 C6 H6A 108.9 no N2 C6 H6B 108.9 no N3 C8 H8 119.7 no N3 C12 H12 120.2 no N3 C13 H13A 109.1 no N3 C13 H13B 109.1 no C2 O6 H16 112(2) no C2 C1 H1 119.7 no C2 C3 H3 120.3 no C3 C4 H4 119.9 no C4 C3 H3 120.3 no C4 C5 H5 120.4 no C5 C4 H4 119.9 no C7 O4 H15 110(2) no C7 C6 H6A 108.9 no C7 C6 H6B 108.9 no C9 O9 H17 112(2) no C9 C8 H8 119.7 no C9 C10 H10 120.4 no C10 C11 H11 119.7 no C11 C10 H10 120.4 no C11 C12 H12 120.2 no C12 C11 H11 119.7 no C14 C13 H13A 109.1 no C14 C13 H13B 109.1 no H6A C6 H6B 107.7 no H13A C13 H13B 107.9 no loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance _geom_bond_publ_flag N2 C1 1.336(3) yes N2 C5 1.346(3) yes N2 C6 1.477(2) yes N3 C8 1.335(2) yes N3 C12 1.346(2) yes N3 C13 1.477(2) yes O1 N1 1.218(3) yes O2 N1 1.229(3) yes O3 N1 1.221(2) yes O4 C7 1.293(3) yes O5 C7 1.206(2) yes O6 C2 1.338(2) yes O7 C14 1.266(2) yes O8 C14 1.228(2) yes O9 C9 1.340(3) yes C1 C2 1.384(3) yes C2 C3 1.380(3) yes C3 C4 1.377(3) yes C4 C5 1.373(3) yes C6 C7 1.511(3) yes C8 C9 1.390(3) yes C9 C10 1.387(3) yes C10 C11 1.374(3) yes C11 C12 1.370(3) yes C13 C14 1.519(3) yes O4 H15 0.86(2) no O6 H16 0.85(2) no O9 H17 0.85(3) no C1 H1 0.9300 no C3 H3 0.9300 no C4 H4 0.9300 no C5 H5 0.9300 no C6 H6A 0.9700 no C6 H6B 0.9700 no C8 H8 0.9300 no C10 H10 0.9300 no C11 H11 0.9300 no C12 H12 0.9300 no C13 H13A 0.9700 no C13 H13B 0.9700 no loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_site_symmetry_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA _geom_hbond_publ_flag O4 H15 O7 . 0.86(2) 1.62(2) 2.482(2) 178(3) yes O6 H16 O8 2_676 0.85(2) 1.83(2) 2.619(2) 154(3) yes O9 H17 O1 1_645 0.85(3) 1.96(3) 2.772(3) 159(3) yes O9 H17 O2 1_645 0.85(3) 2.44(2) 3.155(3) 142(3) yes loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion _geom_torsion_publ_flag C5 N2 C1 C2 0.6(3) no C6 N2 C1 C2 177.95(17) no N2 C1 C2 O6 -179.62(17) no N2 C1 C2 C3 -0.3(3) no N2 C6 C7 O4 9.1(3) no N2 C6 C7 O5 -171.46(18) no N3 C8 C9 O9 179.52(18) no N3 C8 C9 C10 0.3(3) no N3 C13 C14 O7 1.4(3) no N3 C13 C14 O8 -178.63(16) no O6 C2 C3 C4 179.2(2) no O9 C9 C10 C11 -179.5(2) no C1 N2 C5 C4 -0.5(3) no C1 N2 C6 C7 -88.6(2) no C1 C2 C3 C4 -0.1(3) no C2 C3 C4 C5 0.2(4) no C3 C4 C5 N2 0.1(4) no C5 N2 C6 C7 88.7(2) no C6 N2 C5 C4 -177.9(2) no C8 N3 C12 C11 0.2(3) no C8 N3 C13 C14 100.6(2) no C8 C9 C10 C11 -0.3(3) no C9 C10 C11 C12 0.3(3) no C10 C11 C12 N3 -0.3(3) no C12 N3 C13 C14 -76.8(2) no C12 N3 C8 C9 -0.3(3) no C13 N3 C8 C9 -177.67(16) no C13 N3 C12 C11 177.61(16) no