#------------------------------------------------------------------------------ #$Date: 2016-02-14 04:40:26 +0000 (Sun, 14 Feb 2016) $ #$Revision: 176432 $ #$URL: svn://www.crystallography.net/cod/cif/2/20/70/2207021.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2207021 loop_ _publ_author_name 'Qing-Yan Liu' 'Li Xu' _publ_section_title catena-Poly[[aqua(piperazin-1-ium-\kN^4^)copper(II)]-\m-5-sulfonatoisophthalato-\kO^1^:\kO^3^] _journal_coeditor_code NG6189 _journal_issue 10 _journal_name_full 'Acta Crystallographica Section E' _journal_page_first m1972 _journal_page_last m1974 _journal_paper_doi 10.1107/S1600536805028266 _journal_volume 61 _journal_year 2005 _chemical_formula_iupac '[Cu (C8 H3 O7 S) (C4 H11 N2) (H2 O)]' _chemical_formula_moiety 'C12 H16 Cu N2 O8 S' _chemical_formula_sum 'C12 H16 Cu N2 O8 S' _chemical_formula_weight 411.87 _chemical_name_systematic ; catena-Poly[[aqua(piperazin-1-ium-\kN^4^)copper(II)]-\m-5- sulfonatoisophthalato-\kO^1^:\kO^3^] ; _space_group_IT_number 14 _symmetry_cell_setting monoclinic _symmetry_space_group_name_Hall '-P 2ybc' _symmetry_space_group_name_H-M 'P 1 21/c 1' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _cell_angle_alpha 90.00 _cell_angle_beta 106.863(7) _cell_angle_gamma 90.00 _cell_formula_units_Z 4 _cell_length_a 7.4257(12) _cell_length_b 17.214(2) _cell_length_c 12.028(2) _cell_measurement_reflns_used 2385 _cell_measurement_temperature 293.15 _cell_measurement_theta_max 27.4835 _cell_measurement_theta_min 3.1005 _cell_volume 1471.4(4) _computing_cell_refinement CrystalClear _computing_data_collection 'CrystalClear (Rigaku, 2000)' _computing_data_reduction CrystalClear _computing_molecular_graphics 'SHELXTL (Sheldrick, 1997b)' _computing_publication_material SHELXTL _computing_structure_refinement 'SHELXL97 (Sheldrick, 1997a)' _computing_structure_solution 'SHELXS97 (Sheldrick, 1997a)' _diffrn_ambient_temperature 293.15 _diffrn_measured_fraction_theta_full 0.997 _diffrn_measured_fraction_theta_max 0.997 _diffrn_measurement_device_type 'Rigaku Mercury70 (2 \\times 2 bin mode)' _diffrn_measurement_method \w _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0689 _diffrn_reflns_av_sigmaI/netI 0.0720 _diffrn_reflns_limit_h_max 8 _diffrn_reflns_limit_h_min -9 _diffrn_reflns_limit_k_max 14 _diffrn_reflns_limit_k_min -22 _diffrn_reflns_limit_l_max 15 _diffrn_reflns_limit_l_min -15 _diffrn_reflns_number 11319 _diffrn_reflns_theta_full 27.48 _diffrn_reflns_theta_max 27.48 _diffrn_reflns_theta_min 3.10 _diffrn_standards_interval_count 0 _diffrn_standards_number 0 _exptl_absorpt_coefficient_mu 1.674 _exptl_absorpt_correction_T_max 0.848 _exptl_absorpt_correction_T_min 0.788 _exptl_absorpt_correction_type multi-scan _exptl_absorpt_process_details '(CrystalClear; Rigaku, 2000)' _exptl_crystal_colour blue _exptl_crystal_density_diffrn 1.859 _exptl_crystal_density_method 'not measured' _exptl_crystal_description prism _exptl_crystal_F_000 844 _exptl_crystal_size_max 0.18 _exptl_crystal_size_mid 0.12 _exptl_crystal_size_min 0.10 _refine_diff_density_max 0.511 _refine_diff_density_min -0.667 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.002 _refine_ls_hydrogen_treatment mixed _refine_ls_matrix_type full _refine_ls_number_parameters 237 _refine_ls_number_reflns 3374 _refine_ls_number_restraints 5 _refine_ls_restrained_S_all 1.001 _refine_ls_R_factor_all 0.0948 _refine_ls_R_factor_gt 0.0653 _refine_ls_shift/su_max 0.000 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w = 1/[\s^2^(Fo^2^)+(0.0382P)^2^+8.9617P] where P = (Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.1315 _refine_ls_wR_factor_ref 0.1445 _reflns_number_gt 2493 _reflns_number_total 3374 _reflns_threshold_expression I>2\s(I) _cod_data_source_file ng6189.cif _cod_data_source_block I _cod_original_sg_symbol_Hall -P2ybc _cod_original_sg_symbol_H-M 'P 21/c' _cod_database_code 2207021 _cod_database_fobs_code 2207021 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, y+1/2, -z+1/2' '-x, -y, -z' 'x, -y-1/2, z-1/2' loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_type_symbol Cu1 0.59406(10) 0.22835(4) 0.29368(5) 0.0242(2) Uani d . 1 Cu O1 0.6099(6) 0.3378(2) 0.3369(3) 0.0282(9) Uani d . 1 O O2 0.7936(6) 0.2976(2) 0.5056(3) 0.0341(10) Uani d . 1 O O3 0.4577(5) 0.6231(2) 0.2756(3) 0.0267(9) Uani d . 1 O O4 0.6204(6) 0.7053(2) 0.4074(3) 0.0357(10) Uani d . 1 O O5 0.8912(6) 0.5068(3) 0.8484(3) 0.0346(10) Uani d . 1 O O6 1.1800(5) 0.5114(3) 0.7996(3) 0.0349(10) Uani d . 1 O O7 0.9962(6) 0.6293(2) 0.7930(3) 0.0377(10) Uani d . 1 O O8 0.7992(6) 0.2436(2) 0.2220(4) 0.0324(9) Uani d D 1 O H8A 0.850(8) 0.2908(16) 0.219(6) 0.042(19) Uiso d D 1 H H8B 0.785(12) 0.221(4) 0.153(3) 0.08(3) Uiso d D 1 H N1 0.4458(7) 0.1999(3) 0.4032(4) 0.0249(10) Uani d D 1 N H1A 0.433(8) 0.240(2) 0.452(4) 0.032(17) Uiso d D 1 H N2 0.2286(7) 0.0898(3) 0.4926(4) 0.0339(12) Uani d D 1 N H2B 0.157(7) 0.073(4) 0.540(4) 0.040(18) Uiso d D 1 H H2C 0.214(12) 0.050(3) 0.439(6) 0.09(3) Uiso d D 1 H C1 0.7365(7) 0.4341(3) 0.4804(4) 0.0191(10) Uani d . 1 C C2 0.6451(7) 0.4941(3) 0.4071(4) 0.0199(10) Uani d . 1 C H2A 0.5696 0.4833 0.3323 0.024 Uiso calc R 1 H C3 0.6691(7) 0.5702(3) 0.4482(4) 0.0195(10) Uani d . 1 C C4 0.7807(7) 0.5862(3) 0.5598(4) 0.0207(11) Uani d . 1 C H4A 0.7968 0.6372 0.5862 0.025 Uiso calc R 1 H C5 0.8681(7) 0.5263(3) 0.6320(4) 0.0199(11) Uani d . 1 C C6 0.8481(7) 0.4500(3) 0.5922(4) 0.0211(11) Uani d . 1 C H6A 0.9091 0.4099 0.6403 0.025 Uiso calc R 1 H C7 0.7155(7) 0.3504(3) 0.4397(4) 0.0206(11) Uani d . 1 C C8 0.5771(7) 0.6383(3) 0.3733(4) 0.0203(10) Uani d . 1 C C9 0.5327(8) 0.1304(3) 0.4724(5) 0.0304(13) Uani d . 1 C H9A 0.6619 0.1424 0.5153 0.036 Uiso calc R 1 H H9B 0.5349 0.0879 0.4199 0.036 Uiso calc R 1 H C10 0.4278(8) 0.1049(4) 0.5568(5) 0.0322(13) Uani d . 1 C H10A 0.4847 0.0581 0.5968 0.039 Uiso calc R 1 H H10B 0.4352 0.1451 0.6145 0.039 Uiso calc R 1 H C11 0.1353(9) 0.1612(4) 0.4294(5) 0.0347(14) Uani d . 1 C H11A 0.1373 0.2026 0.4844 0.042 Uiso calc R 1 H H11B 0.0052 0.1500 0.3877 0.042 Uiso calc R 1 H C12 0.2413(8) 0.1859(3) 0.3449(5) 0.0302(13) Uani d . 1 C H12A 0.2285 0.1458 0.2864 0.036 Uiso calc R 1 H H12B 0.1852 0.2331 0.3059 0.036 Uiso calc R 1 H S1 0.99452(19) 0.54539(8) 0.77891(11) 0.0235(3) Uani d . 1 S loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 Cu1 0.0316(4) 0.0180(3) 0.0204(3) -0.0030(3) 0.0032(3) -0.0032(3) O1 0.044(2) 0.0171(19) 0.0196(17) -0.0015(17) 0.0028(17) -0.0039(15) O2 0.048(3) 0.0156(19) 0.030(2) 0.0021(18) -0.0013(19) 0.0020(17) O3 0.037(2) 0.023(2) 0.0157(17) 0.0010(17) 0.0005(16) -0.0004(15) O4 0.051(3) 0.016(2) 0.033(2) 0.0036(18) 0.0009(19) -0.0007(17) O5 0.042(2) 0.038(2) 0.027(2) -0.003(2) 0.0139(18) -0.0062(19) O6 0.026(2) 0.052(3) 0.0220(19) 0.0034(19) -0.0002(16) 0.0034(19) O7 0.051(3) 0.022(2) 0.031(2) -0.0065(19) -0.0019(19) -0.0093(18) O8 0.037(2) 0.029(2) 0.031(2) -0.0095(18) 0.0100(18) -0.0088(19) N1 0.031(3) 0.016(2) 0.025(2) -0.0024(19) 0.0033(19) -0.0018(19) N2 0.042(3) 0.036(3) 0.023(2) -0.014(2) 0.008(2) -0.002(2) C1 0.023(3) 0.015(2) 0.019(2) 0.001(2) 0.006(2) 0.005(2) C2 0.028(3) 0.017(2) 0.017(2) 0.002(2) 0.009(2) 0.000(2) C3 0.023(3) 0.017(3) 0.018(2) 0.002(2) 0.007(2) 0.004(2) C4 0.027(3) 0.014(2) 0.021(2) 0.001(2) 0.007(2) -0.001(2) C5 0.024(3) 0.017(3) 0.018(2) -0.002(2) 0.006(2) 0.001(2) C6 0.027(3) 0.018(3) 0.016(2) 0.002(2) 0.004(2) 0.003(2) C7 0.030(3) 0.018(3) 0.016(2) -0.002(2) 0.009(2) -0.003(2) C8 0.023(3) 0.020(3) 0.020(2) 0.004(2) 0.009(2) 0.004(2) C9 0.032(3) 0.027(3) 0.028(3) 0.000(2) 0.002(2) 0.006(2) C10 0.043(4) 0.026(3) 0.022(3) -0.007(3) 0.001(2) 0.003(2) C11 0.035(3) 0.034(3) 0.034(3) -0.002(3) 0.009(3) 0.001(3) C12 0.030(3) 0.029(3) 0.028(3) -0.002(2) 0.002(2) 0.003(3) S1 0.0287(7) 0.0217(7) 0.0168(6) -0.0007(5) 0.0014(5) -0.0023(5) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' S S 0.1246 0.1234 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Cu Cu 0.3201 1.2651 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle_site_symmetry_1 _geom_angle_site_symmetry_3 _geom_angle _geom_angle_publ_flag O1 Cu1 O8 . . 89.63(17) yes O1 Cu1 O3 . 2_645 169.70(15) ? O8 Cu1 O3 . 2_645 91.04(17) yes O1 Cu1 N1 . . 93.61(17) yes O8 Cu1 N1 . . 163.55(18) yes O3 Cu1 N1 2_645 . 88.65(17) yes C7 O1 Cu1 . . 113.3(3) ? C8 O3 Cu1 . 2_655 101.3(3) ? Cu1 O8 H8A . . 122(4) ? Cu1 O8 H8B . . 117(5) ? H8A O8 H8B . . 107(7) ? C9 N1 C12 . . 110.4(4) ? C9 N1 Cu1 . . 109.3(3) ? C12 N1 Cu1 . . 114.0(3) ? C9 N1 H1A . . 111(4) ? C12 N1 H1A . . 98(4) ? Cu1 N1 H1A . . 114(4) ? C10 N2 C11 . . 111.4(5) ? C10 N2 H2B . . 113(4) ? C11 N2 H2B . . 107(4) ? C10 N2 H2C . . 113(6) ? C11 N2 H2C . . 108(6) ? H2B N2 H2C . . 103(7) ? C6 C1 C2 . . 120.6(5) ? C6 C1 C7 . . 118.5(4) ? C2 C1 C7 . . 120.9(4) ? C3 C2 C1 . . 118.8(5) ? C3 C2 H2A . . 120.6 ? C1 C2 H2A . . 120.6 ? C4 C3 C2 . . 120.6(5) ? C4 C3 C8 . . 117.5(5) ? C2 C3 C8 . . 121.9(4) ? C5 C4 C3 . . 120.0(5) ? C5 C4 H4A . . 120.0 ? C3 C4 H4A . . 120.0 ? C4 C5 C6 . . 120.3(5) ? C4 C5 S1 . . 120.3(4) ? C6 C5 S1 . . 119.4(4) ? C1 C6 C5 . . 119.6(5) ? C1 C6 H6A . . 120.2 ? C5 C6 H6A . . 120.2 ? O2 C7 O1 . . 122.6(5) ? O2 C7 C1 . . 120.6(4) ? O1 C7 C1 . . 116.8(4) ? O4 C8 O3 . . 122.8(5) ? O4 C8 C3 . . 119.8(5) ? O3 C8 C3 . . 117.4(5) ? N1 C9 C10 . . 112.5(5) ? N1 C9 H9A . . 109.1 ? C10 C9 H9A . . 109.1 ? N1 C9 H9B . . 109.1 ? C10 C9 H9B . . 109.1 ? H9A C9 H9B . . 107.8 ? N2 C10 C9 . . 109.4(4) ? N2 C10 H10A . . 109.8 ? C9 C10 H10A . . 109.8 ? N2 C10 H10B . . 109.8 ? C9 C10 H10B . . 109.8 ? H10A C10 H10B . . 108.2 ? N2 C11 C12 . . 108.4(5) ? N2 C11 H11A . . 110.0 ? C12 C11 H11A . . 110.0 ? N2 C11 H11B . . 110.0 ? C12 C11 H11B . . 110.0 ? H11A C11 H11B . . 108.4 ? N1 C12 C11 . . 112.7(5) ? N1 C12 H12A . . 109.1 ? C11 C12 H12A . . 109.1 ? N1 C12 H12B . . 109.1 ? C11 C12 H12B . . 109.1 ? H12A C12 H12B . . 107.8 ? O5 S1 O6 . . 110.6(3) ? O5 S1 O7 . . 112.1(3) ? O6 S1 O7 . . 113.9(3) ? O5 S1 C5 . . 105.9(2) ? O6 S1 C5 . . 107.3(2) ? O7 S1 C5 . . 106.5(2) ? loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_site_symmetry_2 _geom_bond_distance _geom_bond_publ_flag Cu1 O1 . 1.949(4) yes Cu1 O8 . 1.974(4) yes Cu1 O3 2_645 1.986(4) yes Cu1 N1 . 2.007(5) yes O1 C7 . 1.276(6) ? O2 C7 . 1.234(6) ? O3 C8 . 1.277(6) ? O3 Cu1 2_655 1.986(4) ? O4 C8 . 1.234(6) ? O5 S1 . 1.449(4) yes O6 S1 . 1.450(4) yes O7 S1 . 1.453(4) yes O8 H8A . 0.90(4) ? O8 H8B . 0.90(5) ? N1 C9 . 1.493(7) ? N1 C12 . 1.496(7) ? N1 H1A . 0.93(4) ? N2 C10 . 1.480(8) ? N2 C11 . 1.504(8) ? N2 H2B . 0.93(5) ? N2 H2C . 0.93(6) ? C1 C6 . 1.387(7) ? C1 C2 . 1.399(7) ? C1 C7 . 1.515(7) ? C2 C3 . 1.393(7) ? C2 H2A . 0.9300 ? C3 C4 . 1.386(7) ? C3 C8 . 1.515(7) ? C4 C5 . 1.382(7) ? C4 H4A . 0.9300 ? C5 C6 . 1.391(7) ? C5 S1 . 1.774(5) ? C6 H6A . 0.9300 ? C9 C10 . 1.513(8) ? C9 H9A . 0.9700 ? C9 H9B . 0.9700 ? C10 H10A . 0.9700 ? C10 H10B . 0.9700 ? C11 C12 . 1.516(8) ? C11 H11A . 0.9700 ? C11 H11B . 0.9700 ? C12 H12A . 0.9700 ? C12 H12B . 0.9700 ? loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_site_symmetry_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA _geom_hbond_publ_flag O8 H8A O7 3_766 0.90(4) 1.82(5) 2.700(6) 165(6) yes O8 H8B O2 4_565 0.90(5) 1.82(3) 2.687(6) 162(8) yes N1 H1A O4 3_666 0.93(4) 2.07(5) 2.958(6) 159(5) yes N2 H2B O5 2_646 0.93(5) 1.88(3) 2.735(6) 153(6) yes N2 H2C O6 4_465 0.93(6) 1.94(7) 2.842(7) 165(8) yes loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion_site_symmetry_1 _geom_torsion O8 Cu1 O1 C7 . -94.2(4) O3 Cu1 O1 C7 2_645 172.0(8) N1 Cu1 O1 C7 . 69.6(4) O1 Cu1 N1 C9 . -131.3(3) O8 Cu1 N1 C9 . -30.3(8) O3 Cu1 N1 C9 2_645 58.7(3) O1 Cu1 N1 C12 . 104.6(4) O8 Cu1 N1 C12 . -154.4(6) O3 Cu1 N1 C12 2_645 -65.4(4) C6 C1 C2 C3 . 0.5(8) C7 C1 C2 C3 . -179.8(5) C1 C2 C3 C4 . -0.4(8) C1 C2 C3 C8 . 179.1(5) C2 C3 C4 C5 . -0.6(8) C8 C3 C4 C5 . 179.9(5) C3 C4 C5 C6 . 1.5(8) C3 C4 C5 S1 . -174.6(4) C2 C1 C6 C5 . 0.4(8) C7 C1 C6 C5 . -179.3(5) C4 C5 C6 C1 . -1.4(8) S1 C5 C6 C1 . 174.7(4) Cu1 O1 C7 O2 . -2.4(7) Cu1 O1 C7 C1 . 179.7(3) C6 C1 C7 O2 . 1.1(8) C2 C1 C7 O2 . -178.6(5) C6 C1 C7 O1 . 179.1(5) C2 C1 C7 O1 . -0.7(7) Cu1 O3 C8 O4 2_655 5.8(6) Cu1 O3 C8 C3 2_655 -173.3(4) C4 C3 C8 O4 . 8.6(7) C2 C3 C8 O4 . -170.9(5) C4 C3 C8 O3 . -172.2(5) C2 C3 C8 O3 . 8.3(7) C12 N1 C9 C10 . -53.4(6) Cu1 N1 C9 C10 . -179.6(4) C11 N2 C10 C9 . -59.5(6) N1 C9 C10 N2 . 56.3(6) C10 N2 C11 C12 . 59.4(6) C9 N1 C12 C11 . 54.0(6) Cu1 N1 C12 C11 . 177.5(4) N2 C11 C12 N1 . -56.5(6) C4 C5 S1 O5 . 113.8(4) C6 C5 S1 O5 . -62.3(5) C4 C5 S1 O6 . -128.0(4) C6 C5 S1 O6 . 55.9(5) C4 C5 S1 O7 . -5.7(5) C6 C5 S1 O7 . 178.2(4)