#------------------------------------------------------------------------------ #$Date: 2025-08-19 12:52:15 +0100 (Tue, 19 Aug 2025) $ #$Revision: 301804 $ #$URL: svn://www.crystallography.net/cod/cif/2/21/42/2214246.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2214246 loop_ _publ_author_name 'Zhou, Zhi' 'Xiao, Zun-Hong' _publ_section_title ; Azido{2-[2-(piperidin-1-yl)ethyliminomethyl]-1-naphtholato}nickel(II) ; _journal_coeditor_code HG2245 _journal_issue 7 _journal_name_full 'Acta Crystallographica Section E' _journal_page_first m2012 _journal_page_last m2012 _journal_paper_doi 10.1107/S1600536807030930 _journal_volume 63 _journal_year 2007 _chemical_formula_iupac '[Ni (C18 H21 N2 O) (N3)]' _chemical_formula_moiety 'C18 H21 N5 Ni O' _chemical_formula_sum 'C18 H21 N5 Ni O' _chemical_formula_weight 382.11 _chemical_name_systematic ; Azido{2-[2-(piperidin-1-yl)ethyliminomethyl]-1-naphtholato}nickel(II) ; _space_group_IT_number 61 _symmetry_cell_setting orthorhombic _symmetry_space_group_name_Hall '-P 2ac 2ab' _symmetry_space_group_name_H-M 'P b c a' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL97 _cell_angle_alpha 90.00 _cell_angle_beta 90.00 _cell_angle_gamma 90.00 _cell_formula_units_Z 8 _cell_length_a 7.5298(12) _cell_length_b 13.268(2) _cell_length_c 33.912(5) _cell_measurement_reflns_used 2636 _cell_measurement_temperature 298(2) _cell_measurement_theta_max 24.9 _cell_measurement_theta_min 2.4 _cell_volume 3388.0(9) _computing_cell_refinement 'SAINT (Bruker, 2001)' _computing_data_collection 'SMART (Bruker, 2001)' _computing_data_reduction SAINT _computing_molecular_graphics SHELXTL _computing_publication_material SHELXTL _computing_structure_refinement SHELXTL _computing_structure_solution 'SHELXTL (Sheldrick, 2001)' _diffrn_ambient_temperature 298(2) _diffrn_measured_fraction_theta_full 1.000 _diffrn_measured_fraction_theta_max 1.000 _diffrn_measurement_device_type 'Bruker SMART APEXII area-detector' _diffrn_measurement_method \w _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0567 _diffrn_reflns_av_sigmaI/netI 0.0463 _diffrn_reflns_limit_h_max 9 _diffrn_reflns_limit_h_min -9 _diffrn_reflns_limit_k_max 9 _diffrn_reflns_limit_k_min -17 _diffrn_reflns_limit_l_max 44 _diffrn_reflns_limit_l_min -42 _diffrn_reflns_number 19025 _diffrn_reflns_theta_full 27.50 _diffrn_reflns_theta_max 27.50 _diffrn_reflns_theta_min 2.40 _diffrn_standards_number 0 _exptl_absorpt_coefficient_mu 1.162 _exptl_absorpt_correction_T_max 0.7841 _exptl_absorpt_correction_T_min 0.7444 _exptl_absorpt_correction_type multi-scan _exptl_absorpt_process_details '(SADABS; Sheldrick, 2004)' _exptl_crystal_colour red _exptl_crystal_density_diffrn 1.498 _exptl_crystal_density_method 'not measured' _exptl_crystal_description block _exptl_crystal_F_000 1600 _exptl_crystal_size_max 0.27 _exptl_crystal_size_mid 0.23 _exptl_crystal_size_min 0.22 _refine_diff_density_max 0.307 _refine_diff_density_min -0.294 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.026 _refine_ls_hydrogen_treatment constr _refine_ls_matrix_type full _refine_ls_number_parameters 226 _refine_ls_number_reflns 3886 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.026 _refine_ls_R_factor_all 0.0746 _refine_ls_R_factor_gt 0.0386 _refine_ls_shift/su_max 0.000 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w = 1/[\s^2^(Fo^2^)+(0.0408P)^2^+0.3939P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.0824 _refine_ls_wR_factor_ref 0.0965 _reflns_number_gt 2511 _reflns_number_total 3886 _reflns_threshold_expression I>2\s(I) _cod_data_source_file hg2245.cif _cod_data_source_block I _cod_original_cell_volume 3387.9(9) _cod_database_code 2214246 _cod_database_fobs_code 2214246 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x+1/2, -y, z+1/2' '-x, y+1/2, -z+1/2' 'x+1/2, -y+1/2, -z' '-x, -y, -z' 'x-1/2, y, -z-1/2' 'x, -y-1/2, z-1/2' '-x-1/2, y-1/2, z' loop_ _atom_site_type_symbol _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy Ni Ni1 0.11052(4) 1.01754(2) 0.126498(9) 0.03627(12) Uani d . 1 O O1 0.0701(2) 1.11144(12) 0.16469(5) 0.0406(4) Uani d . 1 N N1 0.2013(3) 0.92459(14) 0.16125(6) 0.0355(5) Uani d . 1 N N2 0.1609(3) 0.91868(15) 0.08457(6) 0.0394(5) Uani d . 1 N N3 0.0296(3) 1.11223(18) 0.08820(6) 0.0517(6) Uani d . 1 N N4 -0.0786(3) 1.17598(18) 0.09472(6) 0.0435(6) Uani d . 1 N N5 -0.1800(4) 1.2398(2) 0.09892(7) 0.0638(7) Uani d . 1 C C1 0.1479(3) 1.01488(18) 0.22235(8) 0.0334(6) Uani d . 1 C C2 0.0797(3) 1.10007(19) 0.20300(8) 0.0355(6) Uani d . 1 C C3 0.0174(3) 1.1829(2) 0.22607(8) 0.0420(6) Uani d . 1 H H3 -0.0281 1.2396 0.2135 0.050 Uiso calc R 1 C C4 0.0235(3) 1.1799(2) 0.26581(8) 0.0458(7) Uani d . 1 H H4 -0.0180 1.2350 0.2800 0.055 Uiso calc R 1 C C5 0.0913(3) 1.0955(2) 0.28661(7) 0.0400(6) Uani d . 1 C C6 0.0994(4) 1.0939(2) 0.32823(8) 0.0519(8) Uani d . 1 H H6 0.0596 1.1495 0.3424 0.062 Uiso calc R 1 C C7 0.1640(4) 1.0127(3) 0.34801(9) 0.0575(8) Uani d . 1 H H7 0.1690 1.0131 0.3754 0.069 Uiso calc R 1 C C8 0.2227(4) 0.9288(2) 0.32689(8) 0.0502(7) Uani d . 1 H H8 0.2662 0.8729 0.3403 0.060 Uiso calc R 1 C C9 0.2169(3) 0.9282(2) 0.28642(8) 0.0435(7) Uani d . 1 H H9 0.2562 0.8716 0.2728 0.052 Uiso calc R 1 C C10 0.1528(3) 1.01158(19) 0.26501(8) 0.0363(6) Uani d . 1 C C11 0.2107(3) 0.93247(18) 0.19959(7) 0.0362(6) Uani d . 1 H H11 0.2632 0.8794 0.2132 0.043 Uiso calc R 1 C C12 0.2765(4) 0.83414(19) 0.14273(7) 0.0441(7) Uani d . 1 H H12A 0.2627 0.7762 0.1599 0.053 Uiso calc R 1 H H12B 0.4020 0.8436 0.1373 0.053 Uiso calc R 1 C C13 0.1756(4) 0.81910(19) 0.10506(8) 0.0461(7) Uani d . 1 H H13A 0.2372 0.7712 0.0883 0.055 Uiso calc R 1 H H13B 0.0581 0.7927 0.1107 0.055 Uiso calc R 1 C C14 0.3328(4) 0.9506(2) 0.06614(8) 0.0490(7) Uani d . 1 H H14A 0.4244 0.9505 0.0862 0.059 Uiso calc R 1 H H14B 0.3204 1.0191 0.0566 0.059 Uiso calc R 1 C C15 0.3927(4) 0.8840(3) 0.03216(8) 0.0623(9) Uani d . 1 H H15A 0.5006 0.9113 0.0208 0.075 Uiso calc R 1 H H15B 0.4186 0.8169 0.0419 0.075 Uiso calc R 1 C C16 0.2506(5) 0.8780(3) 0.00090(9) 0.0736(10) Uani d . 1 H H16A 0.2867 0.8308 -0.0194 0.088 Uiso calc R 1 H H16B 0.2352 0.9436 -0.0112 0.088 Uiso calc R 1 C C17 0.0771(5) 0.8439(2) 0.01886(9) 0.0711(10) Uani d . 1 H H17A 0.0892 0.7752 0.0282 0.085 Uiso calc R 1 H H17B -0.0149 0.8449 -0.0012 0.085 Uiso calc R 1 C C18 0.0223(4) 0.9118(2) 0.05305(8) 0.0517(7) Uani d . 1 H H18A -0.0019 0.9788 0.0430 0.062 Uiso calc R 1 H H18B -0.0867 0.8860 0.0645 0.062 Uiso calc R 1 loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 Ni1 0.0394(2) 0.02563(18) 0.0438(2) 0.00147(14) -0.00179(15) 0.00165(15) O1 0.0522(11) 0.0259(9) 0.0437(10) 0.0041(8) -0.0025(8) 0.0024(8) N1 0.0340(12) 0.0249(11) 0.0475(13) 0.0028(9) -0.0028(9) -0.0006(10) N2 0.0427(13) 0.0313(12) 0.0442(12) 0.0014(10) -0.0093(10) -0.0003(10) N3 0.0725(17) 0.0371(13) 0.0456(13) 0.0140(13) 0.0023(12) 0.0045(12) N4 0.0570(16) 0.0361(13) 0.0374(13) -0.0015(12) -0.0060(11) 0.0044(11) N5 0.0761(18) 0.0562(17) 0.0591(17) 0.0239(15) -0.0021(14) 0.0058(14) C1 0.0281(12) 0.0263(12) 0.0458(15) -0.0040(10) -0.0017(10) 0.0009(12) C2 0.0304(14) 0.0276(13) 0.0483(16) -0.0045(11) 0.0023(11) -0.0031(12) C3 0.0359(15) 0.0303(14) 0.0597(18) 0.0005(12) 0.0027(13) -0.0022(13) C4 0.0400(16) 0.0369(16) 0.0604(19) -0.0019(13) 0.0088(13) -0.0112(14) C5 0.0302(14) 0.0440(16) 0.0458(16) -0.0085(12) 0.0033(11) -0.0058(13) C6 0.0425(17) 0.058(2) 0.0548(18) -0.0080(15) 0.0060(14) -0.0114(16) C7 0.0463(17) 0.080(2) 0.0462(18) -0.0157(17) 0.0027(14) -0.0036(17) C8 0.0406(16) 0.0568(19) 0.0531(18) -0.0119(14) -0.0061(13) 0.0124(16) C9 0.0387(15) 0.0418(16) 0.0498(17) -0.0079(13) -0.0022(12) 0.0032(14) C10 0.0275(13) 0.0358(14) 0.0457(15) -0.0101(11) 0.0003(10) -0.0009(12) C11 0.0319(14) 0.0289(14) 0.0479(16) -0.0030(11) -0.0033(11) 0.0057(12) C12 0.0549(17) 0.0287(14) 0.0487(16) 0.0092(13) -0.0058(13) 0.0003(13) C13 0.0609(18) 0.0265(14) 0.0509(17) 0.0031(13) -0.0034(14) -0.0037(13) C14 0.0471(16) 0.0543(18) 0.0458(16) -0.0012(14) -0.0020(13) -0.0019(15) C15 0.066(2) 0.072(2) 0.0486(17) 0.0199(18) 0.0024(15) -0.0048(17) C16 0.099(3) 0.075(2) 0.0468(18) 0.031(2) -0.0117(19) -0.0095(18) C17 0.096(3) 0.051(2) 0.066(2) 0.0106(19) -0.043(2) -0.0147(17) C18 0.0501(18) 0.0435(17) 0.0613(18) 0.0003(14) -0.0202(14) -0.0029(15) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Ni Ni 0.3393 1.1124 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle O1 Ni1 N1 93.73(8) O1 Ni1 N3 88.87(9) N1 Ni1 N3 176.16(10) O1 Ni1 N2 178.12(8) N1 Ni1 N2 86.82(9) N3 Ni1 N2 90.49(9) C2 O1 Ni1 128.09(16) C11 N1 C12 118.1(2) C11 N1 Ni1 127.20(17) C12 N1 Ni1 114.69(16) C18 N2 C13 109.2(2) C18 N2 C14 108.8(2) C13 N2 C14 112.3(2) C18 N2 Ni1 114.96(16) C13 N2 Ni1 105.47(15) C14 N2 Ni1 106.21(15) N4 N3 Ni1 123.93(19) N5 N4 N3 176.0(3) C2 C1 C11 119.2(2) C2 C1 C10 120.0(2) C11 C1 C10 120.8(2) O1 C2 C1 125.2(2) O1 C2 C3 115.9(2) C1 C2 C3 118.9(2) C4 C3 C2 120.9(3) C4 C3 H3 119.5 C2 C3 H3 119.5 C3 C4 C5 122.1(3) C3 C4 H4 118.9 C5 C4 H4 118.9 C10 C5 C6 119.5(3) C10 C5 C4 118.9(2) C6 C5 C4 121.6(3) C7 C6 C5 121.4(3) C7 C6 H6 119.3 C5 C6 H6 119.3 C6 C7 C8 119.5(3) C6 C7 H7 120.3 C8 C7 H7 120.3 C9 C8 C7 120.5(3) C9 C8 H8 119.8 C7 C8 H8 119.8 C8 C9 C10 121.5(3) C8 C9 H9 119.3 C10 C9 H9 119.3 C9 C10 C5 117.7(2) C9 C10 C1 123.2(2) C5 C10 C1 119.1(2) N1 C11 C1 125.8(2) N1 C11 H11 117.1 C1 C11 H11 117.1 N1 C12 C13 106.1(2) N1 C12 H12A 110.5 C13 C12 H12A 110.5 N1 C12 H12B 110.5 C13 C12 H12B 110.5 H12A C12 H12B 108.7 N2 C13 C12 108.4(2) N2 C13 H13A 110.0 C12 C13 H13A 110.0 N2 C13 H13B 110.0 C12 C13 H13B 110.0 H13A C13 H13B 108.4 N2 C14 C15 114.1(2) N2 C14 H14A 108.7 C15 C14 H14A 108.7 N2 C14 H14B 108.7 C15 C14 H14B 108.7 H14A C14 H14B 107.6 C16 C15 C14 110.7(3) C16 C15 H15A 109.5 C14 C15 H15A 109.5 C16 C15 H15B 109.5 C14 C15 H15B 109.5 H15A C15 H15B 108.1 C15 C16 C17 110.3(3) C15 C16 H16A 109.6 C17 C16 H16A 109.6 C15 C16 H16B 109.6 C17 C16 H16B 109.6 H16A C16 H16B 108.1 C16 C17 C18 111.3(3) C16 C17 H17A 109.4 C18 C17 H17A 109.4 C16 C17 H17B 109.4 C18 C17 H17B 109.4 H17A C17 H17B 108.0 N2 C18 C17 113.0(2) N2 C18 H18A 109.0 C17 C18 H18A 109.0 N2 C18 H18B 109.0 C17 C18 H18B 109.0 H18A C18 H18B 107.8 loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance Ni1 O1 1.8226(17) Ni1 N1 1.838(2) Ni1 N3 1.907(2) Ni1 N2 1.971(2) O1 C2 1.310(3) N1 C11 1.306(3) N1 C12 1.468(3) N2 C18 1.497(3) N2 C13 1.497(3) N2 C14 1.499(3) N3 N4 1.195(3) N4 N5 1.149(3) C1 C2 1.404(3) C1 C11 1.419(3) C1 C10 1.448(4) C2 C3 1.428(3) C3 C4 1.349(3) C3 H3 0.9300 C4 C5 1.419(4) C4 H4 0.9300 C5 C10 1.410(3) C5 C6 1.413(4) C6 C7 1.359(4) C6 H6 0.9300 C7 C8 1.396(4) C7 H7 0.9300 C8 C9 1.373(4) C8 H8 0.9300 C9 C10 1.408(3) C9 H9 0.9300 C11 H11 0.9300 C12 C13 1.500(4) C12 H12A 0.9700 C12 H12B 0.9700 C13 H13A 0.9700 C13 H13B 0.9700 C14 C15 1.520(4) C14 H14A 0.9700 C14 H14B 0.9700 C15 C16 1.508(4) C15 H15A 0.9700 C15 H15B 0.9700 C16 C17 1.511(5) C16 H16A 0.9700 C16 H16B 0.9700 C17 C18 1.525(4) C17 H17A 0.9700 C17 H17B 0.9700 C18 H18A 0.9700 C18 H18B 0.9700 loop_ _cod_related_entry_id _cod_related_entry_database _cod_related_entry_code 1 PubChem 168309224