#------------------------------------------------------------------------------ #$Date: 2025-08-19 12:52:15 +0100 (Tue, 19 Aug 2025) $ #$Revision: 301804 $ #$URL: svn://www.crystallography.net/cod/cif/2/21/43/2214303.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2214303 loop_ _publ_author_name 'Saied Ghadimi' 'Ali Asghar Ebrahimi Valmoozi' 'Mehrdad Pourayoubi' _publ_section_title ; N,N-Dimethyl O-p-tolyl phosphoramidocyanidate ; _journal_coeditor_code LH2406 _journal_issue 7 _journal_name_full 'Acta Crystallographica Section E' _journal_page_first o3260 _journal_page_last o3260 _journal_paper_doi 10.1107/S1600536807028838 _journal_volume 63 _journal_year 2007 _chemical_formula_iupac 'C10 H13 N2 O2 P' _chemical_formula_moiety 'C10 H13 N2 O2 P' _chemical_formula_sum 'C10 H13 N2 O2 P' _chemical_formula_weight 224.19 _chemical_name_systematic ; N,N-Dimethyl O-p-tolyl phosphoramidocyanidate ; _space_group_IT_number 1 _symmetry_cell_setting triclinic _symmetry_space_group_name_Hall 'P 1' _symmetry_space_group_name_H-M 'P 1' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL-97 _cell_angle_alpha 105.604(3) _cell_angle_beta 95.800(3) _cell_angle_gamma 106.802(3) _cell_formula_units_Z 1 _cell_length_a 6.0322(9) _cell_length_b 6.8532(10) _cell_length_c 7.3820(11) _cell_measurement_reflns_used 1809 _cell_measurement_temperature 100(2) _cell_measurement_theta_max 33.68 _cell_measurement_theta_min 2.92 _cell_volume 276.03(7) _computing_cell_refinement 'SAINT (Bruker, 2005)' _computing_data_collection 'APEX2 (Bruker, 2005)' _computing_data_reduction SAINT _computing_molecular_graphics SHELXTL _computing_publication_material SHELXTL _computing_structure_refinement SHELXTL _computing_structure_solution 'SHELXTL (Bruker, 1998)' _diffrn_ambient_temperature 100(2) _diffrn_measured_fraction_theta_full 0.995 _diffrn_measured_fraction_theta_max 0.995 _diffrn_measurement_device_type 'Bruker APEX II' _diffrn_measurement_method \w _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0197 _diffrn_reflns_av_sigmaI/netI 0.0439 _diffrn_reflns_limit_h_max 8 _diffrn_reflns_limit_h_min -8 _diffrn_reflns_limit_k_max 9 _diffrn_reflns_limit_k_min -9 _diffrn_reflns_limit_l_max 10 _diffrn_reflns_limit_l_min -9 _diffrn_reflns_number 3289 _diffrn_reflns_theta_full 29.00 _diffrn_reflns_theta_max 29.00 _diffrn_reflns_theta_min 2.92 _diffrn_standards_decay_% 0 _diffrn_standards_interval_count 0 _diffrn_standards_interval_time 0 _diffrn_standards_number 0 _exptl_absorpt_coefficient_mu 0.231 _exptl_absorpt_correction_type none _exptl_crystal_colour colourless _exptl_crystal_density_diffrn 1.349 _exptl_crystal_density_method 'not measured' _exptl_crystal_description prism _exptl_crystal_F_000 118 _exptl_crystal_size_max 0.60 _exptl_crystal_size_mid 0.12 _exptl_crystal_size_min 0.10 _refine_diff_density_max 0.482 _refine_diff_density_min -0.413 _refine_ls_abs_structure_details 'Flack (1983), 1332 Friedel pairs' _refine_ls_abs_structure_Flack -0.03(7) _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.042 _refine_ls_hydrogen_treatment constr _refine_ls_matrix_type full _refine_ls_number_parameters 139 _refine_ls_number_reflns 2791 _refine_ls_number_restraints 3 _refine_ls_restrained_S_all 1.041 _refine_ls_R_factor_all 0.0356 _refine_ls_R_factor_gt 0.0338 _refine_ls_shift/su_max 0.001 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.0486P)^2^+] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.0823 _refine_ls_wR_factor_ref 0.0836 _reflns_number_gt 2688 _reflns_number_total 2791 _reflns_threshold_expression I>2\s(I) _cod_data_source_file lh2406.cif _cod_data_source_block I _cod_depositor_comments ; The following automatic conversions were performed: '_symmetry_cell_setting' value 'Triclinic' changed to 'triclinic' according to '/home/saulius/struct/CIF-dictionaries/cif_core.dic' dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29. Automatic conversion script Id: cif_fix_enum 1527 2010-12-29 10:47:43Z saulius The following automatic conversions were performed: '_symmetry_cell_setting' value 'Triclinic' changed to 'triclinic' according to /home/saulius/struct/CIF-dictionaries/cif_core.dic dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29. Automatic conversion script Id: cif_fix_values 1715 2011-07-08 13:25:40Z adriana ; _cod_database_code 2214303 _cod_database_fobs_code 2214303 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' loop_ _atom_site_type_symbol _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy P P1 0.82244(6) 0.58868(5) 0.72672(5) 0.01572(11) Uani d . 1 O O1 1.0453(2) 0.5443(2) 0.7274(2) 0.0239(3) Uani d . 1 O O2 0.6317(2) 0.48682(18) 0.53457(17) 0.0175(2) Uani d . 1 N N1 0.8366(2) 0.8366(2) 0.7906(2) 0.0186(3) Uani d . 1 N N2 0.5735(3) 0.4022(3) 0.9964(2) 0.0244(3) Uani d . 1 C C1 0.6641(3) 0.4674(3) 0.8858(3) 0.0180(3) Uani d . 1 C C2 0.5178(3) 0.2614(3) 0.4632(2) 0.0157(3) Uani d . 1 C C3 0.6336(3) 0.1317(3) 0.3651(2) 0.0177(3) Uani d . 1 H H3A 0.7893 0.1921 0.3468 0.021 Uiso calc R 1 C C4 0.5173(3) -0.0891(3) 0.2938(3) 0.0193(3) Uani d . 1 H H4A 0.5943 -0.1799 0.2255 0.023 Uiso calc R 1 C C5 0.2882(3) -0.1790(3) 0.3214(2) 0.0175(3) Uani d . 1 C C6 0.1780(3) -0.0424(3) 0.4193(3) 0.0189(3) Uani d . 1 H H6A 0.0219 -0.1013 0.4375 0.023 Uiso calc R 1 C C7 0.2907(3) 0.1783(3) 0.4912(2) 0.0179(3) Uani d . 1 H H7A 0.2136 0.2699 0.5580 0.021 Uiso calc R 1 C C8 0.1680(4) -0.4192(3) 0.2471(3) 0.0246(4) Uani d . 1 H H8A 0.0071 -0.4544 0.2726 0.037 Uiso calc R 1 H H8B 0.2569 -0.4885 0.3119 0.037 Uiso calc R 1 H H8C 0.1618 -0.4704 0.1087 0.037 Uiso calc R 1 C C9 0.6234(3) 0.8978(3) 0.7893(3) 0.0208(4) Uani d . 1 H H9A 0.6312 0.9986 0.7160 0.031 Uiso calc R 1 H H9B 0.6118 0.9661 0.9213 0.031 Uiso calc R 1 H H9C 0.4844 0.7695 0.7299 0.031 Uiso calc R 1 C C10 1.0552(3) 1.0079(3) 0.9003(3) 0.0246(4) Uani d . 1 H H10A 1.0802 1.1293 0.8498 0.037 Uiso calc R 1 H H10B 1.1886 0.9538 0.8889 0.037 Uiso calc R 1 H H10C 1.0430 1.0549 1.0354 0.037 Uiso calc R 1 loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 P1 0.01261(18) 0.01389(19) 0.0204(2) 0.00529(14) 0.00426(14) 0.00354(15) O1 0.0163(6) 0.0243(7) 0.0313(7) 0.0107(5) 0.0062(5) 0.0044(6) O2 0.0189(6) 0.0122(5) 0.0206(6) 0.0049(5) 0.0032(5) 0.0045(5) N1 0.0151(7) 0.0142(7) 0.0258(8) 0.0049(6) 0.0048(6) 0.0050(6) N2 0.0245(8) 0.0232(8) 0.0241(8) 0.0062(6) 0.0058(6) 0.0066(6) C1 0.0168(8) 0.0139(8) 0.0213(8) 0.0056(6) 0.0010(6) 0.0027(6) C2 0.0168(8) 0.0140(7) 0.0159(7) 0.0046(6) 0.0018(6) 0.0052(6) C3 0.0152(8) 0.0181(8) 0.0188(8) 0.0047(6) 0.0050(6) 0.0045(6) C4 0.0211(9) 0.0180(8) 0.0193(8) 0.0084(7) 0.0054(7) 0.0038(6) C5 0.0173(8) 0.0173(8) 0.0168(8) 0.0051(6) -0.0006(6) 0.0056(6) C6 0.0130(8) 0.0210(8) 0.0224(8) 0.0049(6) 0.0028(6) 0.0076(7) C7 0.0163(8) 0.0193(8) 0.0187(8) 0.0085(7) 0.0024(6) 0.0046(6) C8 0.0222(9) 0.0156(8) 0.0311(10) 0.0030(7) -0.0009(7) 0.0050(7) C9 0.0209(9) 0.0184(8) 0.0247(9) 0.0111(7) 0.0031(7) 0.0048(7) C10 0.0168(8) 0.0197(9) 0.0293(10) 0.0011(7) 0.0036(7) 0.0005(7) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' P P 0.1023 0.0942 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle O1 P1 O2 118.26(7) O1 P1 N1 117.32(7) O2 P1 N1 102.87(7) O1 P1 C1 108.72(8) O2 P1 C1 101.14(8) N1 P1 C1 106.88(8) C2 O2 P1 119.88(10) C9 N1 C10 115.30(14) C9 N1 P1 121.52(11) C10 N1 P1 121.19(13) N2 C1 P1 175.43(17) C7 C2 C3 121.95(15) C7 C2 O2 118.45(15) C3 C2 O2 119.60(15) C2 C3 C4 118.69(16) C2 C3 H3A 120.7 C4 C3 H3A 120.7 C3 C4 C5 120.86(16) C3 C4 H4A 119.6 C5 C4 H4A 119.6 C6 C5 C4 118.46(16) C6 C5 C8 121.62(17) C4 C5 C8 119.92(17) C5 C6 C7 121.58(16) C5 C6 H6A 119.2 C7 C6 H6A 119.2 C2 C7 C6 118.46(16) C2 C7 H7A 120.8 C6 C7 H7A 120.8 C5 C8 H8A 109.5 C5 C8 H8B 109.5 H8A C8 H8B 109.5 C5 C8 H8C 109.5 H8A C8 H8C 109.5 H8B C8 H8C 109.5 N1 C9 H9A 109.5 N1 C9 H9B 109.5 H9A C9 H9B 109.5 N1 C9 H9C 109.5 H9A C9 H9C 109.5 H9B C9 H9C 109.5 N1 C10 H10A 109.5 N1 C10 H10B 109.5 H10A C10 H10B 109.5 N1 C10 H10C 109.5 H10A C10 H10C 109.5 H10B C10 H10C 109.5 loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance P1 O1 1.4613(13) P1 O2 1.5799(13) P1 N1 1.6104(15) P1 C1 1.8096(18) O2 C2 1.4181(19) N1 C9 1.463(2) N1 C10 1.467(2) N2 C1 1.145(2) C2 C7 1.383(2) C2 C3 1.385(2) C3 C4 1.394(2) C3 H3A 0.9500 C4 C5 1.401(2) C4 H4A 0.9500 C5 C6 1.390(2) C5 C8 1.510(2) C6 C7 1.390(2) C6 H6A 0.9500 C7 H7A 0.9500 C8 H8A 0.9800 C8 H8B 0.9800 C8 H8C 0.9800 C9 H9A 0.9800 C9 H9B 0.9800 C9 H9C 0.9800 C10 H10A 0.9800 C10 H10B 0.9800 C10 H10C 0.9800 loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_site_symmetry_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA C7 H7A O1 1_455 0.95 2.50 3.441(2) 174 loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion O1 P1 O2 C2 67.61(14) N1 P1 O2 C2 -161.29(12) C1 P1 O2 C2 -50.89(13) O1 P1 N1 C9 178.18(13) O2 P1 N1 C9 46.52(14) C1 P1 N1 C9 -59.52(15) O1 P1 N1 C10 -18.64(18) O2 P1 N1 C10 -150.30(15) C1 P1 N1 C10 103.65(16) P1 O2 C2 C7 101.96(16) P1 O2 C2 C3 -79.22(17) C7 C2 C3 C4 -0.3(3) O2 C2 C3 C4 -179.12(15) C2 C3 C4 C5 -0.4(3) C3 C4 C5 C6 0.9(3) C3 C4 C5 C8 -178.47(15) C4 C5 C6 C7 -0.8(3) C8 C5 C6 C7 178.61(16) C3 C2 C7 C6 0.5(3) O2 C2 C7 C6 179.28(14) C5 C6 C7 C2 0.1(3) loop_ _cod_related_entry_id _cod_related_entry_database _cod_related_entry_code 1 ChemSpider 21184754 2 PubChem 139072506