#------------------------------------------------------------------------------ #$Date: 2016-02-20 16:35:30 +0000 (Sat, 20 Feb 2016) $ #$Revision: 176787 $ #$URL: svn://www.crystallography.net/cod/cif/2/21/43/2214334.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2214334 loop_ _publ_author_name 'Harrison, William T. A.' 'Sarojini, B. K.' 'Bindya, S.' 'Narayana, B.' 'Yathirajan, H. S.' _publ_section_title ; (1E)-5-Amino-1,5-bis[4-(methylsulfanyl)phenyl]pent-1-en-3-one ; _journal_coeditor_code LW2020 _journal_issue 7 _journal_name_full 'Acta Crystallographica Section E' _journal_page_first o3142 _journal_page_last o3142 _journal_paper_doi 10.1107/S1600536807026049 _journal_volume 63 _journal_year 2007 _chemical_formula_iupac 'C19 H21 N O S2' _chemical_formula_moiety 'C19 H21 N O S2' _chemical_formula_sum 'C19 H21 N O S2' _chemical_formula_weight 343.49 _chemical_name_systematic ; (1E)-5-Amino-1,5-bis[4-(methylsulfanyl)phenyl]pent-1-en-3-one ; _space_group_IT_number 61 _symmetry_cell_setting orthorhombic _symmetry_space_group_name_Hall '-P 2ac 2ab' _symmetry_space_group_name_H-M 'P b c a' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL-97 _cell_angle_alpha 90.00 _cell_angle_beta 90.00 _cell_angle_gamma 90.00 _cell_formula_units_Z 8 _cell_length_a 16.705(3) _cell_length_b 5.5968(10) _cell_length_c 37.730(7) _cell_measurement_reflns_used 723 _cell_measurement_temperature 295(2) _cell_measurement_theta_max 23.26 _cell_measurement_theta_min 4.41 _cell_volume 3527.5(11) _computing_cell_refinement 'SAINT (Bruker, 1999)' _computing_data_collection 'SMART (Bruker, 1999)' _computing_data_reduction SAINT _computing_molecular_graphics 'ORTEP-3 (Farrugia, 1997)' _computing_publication_material SHELXL97 _computing_structure_refinement 'SHELXL97 (Sheldrick, 1997)' _computing_structure_solution 'SHELXS97 (Sheldrick, 1997)' _diffrn_ambient_temperature 295(2) _diffrn_measured_fraction_theta_full 0.996 _diffrn_measured_fraction_theta_max 0.996 _diffrn_measurement_device_type 'Bruker SMART 1000 CCD' _diffrn_measurement_method \w _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0731 _diffrn_reflns_av_sigmaI/netI 0.0505 _diffrn_reflns_limit_h_max 19 _diffrn_reflns_limit_h_min -20 _diffrn_reflns_limit_k_max 6 _diffrn_reflns_limit_k_min -6 _diffrn_reflns_limit_l_max 43 _diffrn_reflns_limit_l_min -45 _diffrn_reflns_number 17587 _diffrn_reflns_theta_full 25.49 _diffrn_reflns_theta_max 25.49 _diffrn_reflns_theta_min 4.25 _exptl_absorpt_coefficient_mu 0.306 _exptl_absorpt_correction_T_max 0.986 _exptl_absorpt_correction_T_min 0.888 _exptl_absorpt_correction_type multi-scan _exptl_absorpt_process_details '(SADABS; Bruker, 1999)' _exptl_crystal_colour orange _exptl_crystal_density_diffrn 1.294 _exptl_crystal_density_method 'not measured' _exptl_crystal_description slab _exptl_crystal_F_000 1456 _exptl_crystal_size_max 0.40 _exptl_crystal_size_mid 0.20 _exptl_crystal_size_min 0.05 _refine_diff_density_max 0.231 _refine_diff_density_min -0.289 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 0.914 _refine_ls_hydrogen_treatment constr _refine_ls_matrix_type full _refine_ls_number_parameters 232 _refine_ls_number_reflns 3278 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 0.914 _refine_ls_R_factor_all 0.1322 _refine_ls_R_factor_gt 0.0533 _refine_ls_shift/su_max 0.000 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.0713P)^2^] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.1200 _refine_ls_wR_factor_ref 0.1494 _reflns_number_gt 1465 _reflns_number_total 3278 _reflns_threshold_expression I>2\s(I) _cod_data_source_file lw2020.cif _cod_data_source_block I _cod_database_code 2214334 _cod_database_fobs_code 2214334 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x+1/2, -y, z+1/2' '-x, y+1/2, -z+1/2' 'x+1/2, -y+1/2, -z' '-x, -y, -z' 'x-1/2, y, -z-1/2' 'x, -y-1/2, z-1/2' '-x-1/2, y-1/2, z' loop_ _atom_site_type_symbol _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy C C1 0.5922(3) 0.5615(7) 0.37528(10) 0.0917(11) Uani d . 1 H H1 0.5662 0.6435 0.3572 0.110 Uiso calc R 1 C C2 0.5875(2) 0.6479(7) 0.40946(10) 0.0950(12) Uani d . 1 H H2 0.5578 0.7850 0.4140 0.114 Uiso calc R 1 C C3 0.6256(2) 0.5359(7) 0.43673(9) 0.0785(10) Uani d . 1 C C4 0.6685(2) 0.3312(7) 0.42919(9) 0.0847(11) Uani d . 1 H H4 0.6947 0.2505 0.4473 0.102 Uiso calc R 1 C C5 0.6728(2) 0.2448(6) 0.39472(9) 0.0777(10) Uani d . 1 H H5 0.7023 0.1074 0.3901 0.093 Uiso calc R 1 C C6 0.6343(2) 0.3585(6) 0.36719(9) 0.0695(9) Uani d . 1 C C7 0.6364(2) 0.2713(6) 0.33017(9) 0.0729(9) Uani d . 1 H H7 0.6186 0.3768 0.3128 0.087 Uiso calc R 1 C C8 0.6605(2) 0.0640(7) 0.31933(10) 0.0780(10) Uani d . 1 H H8 0.6817 -0.0376 0.3364 0.094 Uiso calc R 1 C C9 0.65773(19) -0.0279(7) 0.28275(8) 0.0696(9) Uani d . 1 C C10 0.6515(2) 0.1376(5) 0.25147(8) 0.0698(9) Uani d . 1 H H10A 0.6292 0.2887 0.2593 0.084 Uiso calc R 1 H H10B 0.7047 0.1685 0.2423 0.084 Uiso calc R 1 C C11 0.60051(19) 0.0390(6) 0.22233(7) 0.0639(8) Uani d . 1 H H11 0.6193 -0.1239 0.2177 0.077 Uiso calc R 1 C C12 0.60787(18) 0.1753(5) 0.18788(7) 0.0584(8) Uani d . 1 C C13 0.6599(2) 0.0985(6) 0.16217(9) 0.0763(10) Uani d . 1 H H13 0.6914 -0.0353 0.1665 0.092 Uiso calc R 1 C C14 0.6667(2) 0.2145(7) 0.13016(9) 0.0807(10) Uani d . 1 H H14 0.7020 0.1562 0.1132 0.097 Uiso calc R 1 C C15 0.6221(2) 0.4150(6) 0.12276(8) 0.0647(8) Uani d . 1 C C16 0.57100(19) 0.4968(6) 0.14881(9) 0.0748(9) Uani d . 1 H H16 0.5404 0.6330 0.1448 0.090 Uiso calc R 1 C C17 0.5650(2) 0.3779(6) 0.18074(8) 0.0734(9) Uani d . 1 H H17 0.5307 0.4376 0.1980 0.088 Uiso calc R 1 C C18A 0.6696(8) 0.4526(18) 0.50761(19) 0.185(6) Uani d P 0.558(10) H H18A 0.6800 0.5275 0.5300 0.278 Uiso calc PR 0.558(10) H H18B 0.7194 0.4056 0.4969 0.278 Uiso calc PR 0.558(10) H H18C 0.6367 0.3142 0.5111 0.278 Uiso calc PR 0.558(10) C C18B 0.5447(6) 0.868(2) 0.4815(2) 0.129(5) Uani d P 0.442(10) H H18D 0.5360 0.9167 0.5056 0.194 Uiso calc PR 0.442(10) H H18E 0.4962 0.8019 0.4721 0.194 Uiso calc PR 0.442(10) H H18F 0.5604 1.0040 0.4677 0.194 Uiso calc PR 0.442(10) C C19A 0.5590(4) 0.7683(11) 0.07904(14) 0.103(3) Uani d P 0.645(8) H H19A 0.5703 0.8896 0.0963 0.154 Uiso calc PR 0.645(8) H H19B 0.5078 0.6982 0.0839 0.154 Uiso calc PR 0.645(8) H H19C 0.5584 0.8382 0.0558 0.154 Uiso calc PR 0.645(8) C C19B 0.6783(9) 0.395(2) 0.0529(3) 0.142(6) Uani d P 0.355(8) H H19D 0.7305 0.3581 0.0620 0.212 Uiso calc PR 0.355(8) H H19E 0.6834 0.4812 0.0310 0.212 Uiso calc PR 0.355(8) H H19F 0.6495 0.2490 0.0487 0.212 Uiso calc PR 0.355(8) N N1 0.52006(13) 0.0200(4) 0.23479(6) 0.0664(7) Uani d . 1 H H1A 0.4895 -0.0385 0.2175 0.080 Uiso d R 1 H H1B 0.5026 0.1648 0.2408 0.080 Uiso d R 1 O O1 0.66252(17) -0.2418(5) 0.27820(6) 0.0981(8) Uani d . 1 S S1 0.62088(8) 0.6514(2) 0.48013(3) 0.1207(5) Uani d . 1 S S2 0.63084(7) 0.5537(2) 0.08090(2) 0.0983(4) Uani d . 1 loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 C1 0.125(3) 0.075(3) 0.075(3) 0.013(2) -0.012(2) 0.004(2) C2 0.125(3) 0.083(3) 0.077(3) 0.018(2) -0.002(2) -0.009(2) C3 0.094(3) 0.082(2) 0.059(2) -0.001(2) 0.0011(19) 0.003(2) C4 0.092(3) 0.100(3) 0.062(2) 0.006(2) -0.0071(19) 0.018(2) C5 0.083(2) 0.077(2) 0.073(2) 0.0083(19) 0.005(2) 0.002(2) C6 0.079(2) 0.073(2) 0.057(2) -0.009(2) -0.0037(18) 0.0082(18) C7 0.080(2) 0.065(2) 0.074(2) -0.0024(19) -0.0078(19) 0.0111(19) C8 0.084(2) 0.073(2) 0.077(3) -0.001(2) -0.0053(19) 0.016(2) C9 0.077(2) 0.071(2) 0.061(2) -0.002(2) 0.0003(16) 0.0004(19) C10 0.082(2) 0.066(2) 0.062(2) -0.0021(18) -0.0050(17) 0.0043(17) C11 0.072(2) 0.068(2) 0.0519(18) -0.0042(17) 0.0032(16) -0.0025(15) C12 0.0608(19) 0.062(2) 0.0520(18) -0.0067(17) 0.0006(16) -0.0058(16) C13 0.079(2) 0.084(2) 0.065(2) 0.0177(19) 0.0108(18) 0.0042(19) C14 0.080(2) 0.099(3) 0.063(2) 0.013(2) 0.0220(18) 0.000(2) C15 0.068(2) 0.078(2) 0.0483(18) -0.0090(19) 0.0000(16) 0.0006(16) C16 0.078(2) 0.076(2) 0.070(2) 0.0085(18) 0.0070(19) 0.004(2) C17 0.086(2) 0.080(2) 0.0547(19) 0.007(2) 0.0187(18) -0.0008(18) C18A 0.335(16) 0.165(9) 0.055(5) 0.048(10) -0.013(7) -0.006(5) C18B 0.140(10) 0.155(10) 0.092(7) 0.039(8) -0.010(6) -0.011(7) C19A 0.102(5) 0.126(5) 0.080(4) 0.002(4) -0.005(3) 0.024(4) C19B 0.205(14) 0.172(13) 0.048(7) 0.017(11) 0.033(8) 0.020(7) N1 0.0436(14) 0.101(2) 0.0549(14) -0.0148(13) 0.0039(11) 0.0137(15) O1 0.140(2) 0.0674(16) 0.0873(18) 0.0104(16) -0.0053(15) 0.0060(14) S1 0.1498(11) 0.1446(11) 0.0678(7) 0.0149(9) 0.0039(7) -0.0160(7) S2 0.1033(8) 0.1321(10) 0.0594(6) -0.0058(7) 0.0019(5) 0.0185(6) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' S S 0.1246 0.1234 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle C6 C1 C2 121.9(4) C6 C1 H1 119.0 C2 C1 H1 119.0 C3 C2 C1 121.2(4) C3 C2 H2 119.4 C1 C2 H2 119.4 C2 C3 C4 117.9(3) C2 C3 S1 120.8(3) C4 C3 S1 121.3(3) C3 C4 C5 120.6(3) C3 C4 H4 119.7 C5 C4 H4 119.7 C6 C5 C4 121.4(3) C6 C5 H5 119.3 C4 C5 H5 119.3 C1 C6 C5 117.0(3) C1 C6 C7 119.8(3) C5 C6 C7 123.2(3) C8 C7 C6 127.0(3) C8 C7 H7 116.5 C6 C7 H7 116.5 C7 C8 C9 126.8(3) C7 C8 H8 116.6 C9 C8 H8 116.6 O1 C9 C8 118.4(3) O1 C9 C10 120.1(3) C8 C9 C10 121.5(3) C11 C10 C9 112.9(3) C11 C10 H10A 109.0 C9 C10 H10A 109.0 C11 C10 H10B 109.0 C9 C10 H10B 109.0 H10A C10 H10B 107.8 N1 C11 C10 108.7(2) N1 C11 C12 113.4(3) C10 C11 C12 113.5(3) N1 C11 H11 106.9 C10 C11 H11 106.9 C12 C11 H11 106.9 C17 C12 C13 116.9(3) C17 C12 C11 123.0(3) C13 C12 C11 120.1(3) C12 C13 C14 121.7(3) C12 C13 H13 119.2 C14 C13 H13 119.2 C15 C14 C13 121.2(3) C15 C14 H14 119.4 C13 C14 H14 119.4 C14 C15 C16 117.5(3) C14 C15 S2 119.7(3) C16 C15 S2 122.8(3) C15 C16 C17 120.4(3) C15 C16 H16 119.8 C17 C16 H16 119.8 C12 C17 C16 122.3(3) C12 C17 H17 118.9 C16 C17 H17 118.9 S1 C18A H18A 109.5 S1 C18A H18B 109.5 H18A C18A H18B 109.5 S1 C18A H18C 109.5 H18A C18A H18C 109.5 H18B C18A H18C 109.5 S1 C18B H18D 109.5 S1 C18B H18E 109.5 H18D C18B H18E 109.5 S1 C18B H18F 109.5 H18D C18B H18F 109.5 H18E C18B H18F 109.5 S2 C19A H19A 109.5 S2 C19A H19B 109.5 H19A C19A H19B 109.5 S2 C19A H19C 109.5 H19A C19A H19C 109.5 H19B C19A H19C 109.5 S2 C19B H19D 109.5 S2 C19B H19E 109.5 H19D C19B H19E 109.5 S2 C19B H19F 109.5 H19D C19B H19F 109.5 H19E C19B H19F 109.5 C11 N1 H1A 109.0 C11 N1 H1B 108.9 H1A N1 H1B 109.5 C18A S1 C18B 140.2(5) C18A S1 C3 107.5(3) C18B S1 C3 108.2(3) C19B S2 C19A 135.9(5) C19B S2 C15 112.9(5) C19A S2 C15 106.8(2) loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance C1 C6 1.370(4) C1 C2 1.379(5) C1 H1 0.9300 C2 C3 1.362(5) C2 H2 0.9300 C3 C4 1.381(5) C3 S1 1.762(3) C4 C5 1.389(4) C4 H4 0.9300 C5 C6 1.378(4) C5 H5 0.9300 C6 C7 1.480(4) C7 C8 1.294(4) C7 H7 0.9300 C8 C9 1.473(5) C8 H8 0.9300 C9 O1 1.212(4) C9 C10 1.504(4) C10 C11 1.496(4) C10 H10A 0.9700 C10 H10B 0.9700 C11 N1 1.428(4) C11 C12 1.512(4) C11 H11 0.9800 C12 C17 1.367(4) C12 C13 1.372(4) C13 C14 1.376(4) C13 H13 0.9300 C14 C15 1.375(4) C14 H14 0.9300 C15 C16 1.379(4) C15 S2 1.766(3) C16 C17 1.380(4) C16 H16 0.9300 C17 H17 0.9300 C18A S1 1.725(9) C18A H18A 0.9600 C18A H18B 0.9600 C18A H18C 0.9600 C18B S1 1.758(10) C18B H18D 0.9600 C18B H18E 0.9600 C18B H18F 0.9600 C19A S2 1.699(6) C19A H19A 0.9600 C19A H19B 0.9600 C19A H19C 0.9600 C19B S2 1.594(12) C19B H19D 0.9600 C19B H19E 0.9600 C19B H19F 0.9600 N1 H1A 0.8900 N1 H1B 0.8900 loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_site_symmetry_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA N1 H1B N1 3_655 0.89 2.22 3.0981(19) 167 loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion C6 C1 C2 C3 0.9(6) C1 C2 C3 C4 -0.7(6) C1 C2 C3 S1 178.6(3) C2 C3 C4 C5 0.5(5) S1 C3 C4 C5 -178.8(3) C3 C4 C5 C6 -0.5(5) C2 C1 C6 C5 -0.9(5) C2 C1 C6 C7 179.0(4) C4 C5 C6 C1 0.6(5) C4 C5 C6 C7 -179.3(3) C1 C6 C7 C8 -166.6(4) C5 C6 C7 C8 13.3(5) C6 C7 C8 C9 175.8(3) C7 C8 C9 O1 -161.0(4) C7 C8 C9 C10 20.7(5) O1 C9 C10 C11 38.2(4) C8 C9 C10 C11 -143.5(3) C9 C10 C11 N1 65.4(3) C9 C10 C11 C12 -167.4(3) N1 C11 C12 C17 40.8(4) C10 C11 C12 C17 -84.0(4) N1 C11 C12 C13 -139.8(3) C10 C11 C12 C13 95.4(4) C17 C12 C13 C14 -2.3(5) C11 C12 C13 C14 178.3(3) C12 C13 C14 C15 0.9(5) C13 C14 C15 C16 0.7(5) C13 C14 C15 S2 -178.4(3) C14 C15 C16 C17 -0.7(5) S2 C15 C16 C17 178.4(3) C13 C12 C17 C16 2.3(5) C11 C12 C17 C16 -178.3(3) C15 C16 C17 C12 -0.8(5) C2 C3 S1 C18A 175.8(5) C4 C3 S1 C18A -4.9(6) C2 C3 S1 C18B 13.6(5) C4 C3 S1 C18B -167.1(5) C14 C15 S2 C19B 11.9(7) C16 C15 S2 C19B -167.2(7) C14 C15 S2 C19A 172.4(3) C16 C15 S2 C19A -6.7(4)