#------------------------------------------------------------------------------ #$Date: 2009-11-16 01:43:51 +0000 (Mon, 16 Nov 2009) $ #$Revision: 853 $ #$URL: svn://www.crystallography.net/cod/cif/2/2214368.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2214368 _space_group_IT_number 14 _symmetry_space_group_name_Hall '-P 2ybc' _symmetry_space_group_name_H-M 'P 1 21/c 1' _[local]_cod_cif_authors_sg_H-M 'P 21/c' loop_ _publ_author_name 'Wang, Min' 'Cheng, Le-Hua' 'Wang, An-Ming' _publ_section_title ; 4,4',6,6'-Tetramethyl-2,2'-(butane-1,4-diyldithio)dipyrimidine ; _journal_coeditor_code OM2134 _journal_issue 7 _journal_name_full 'Acta Crystallographica, Section E' _journal_page_first o3296 _journal_page_last o3296 _journal_volume 63 _journal_year 2007 _chemical_formula_iupac 'C16 H22 N4 S2' _chemical_formula_moiety 'C16 H22 N4 S2' _chemical_formula_sum 'C16 H22 N4 S2' _chemical_formula_weight 334.50 _chemical_name_systematic ; 4,4',6,6'-Tetramethyl-2,2'-(butane-1,4-diyldithio)dipyrimidine ; _symmetry_cell_setting monoclinic _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL-97 _cell_angle_alpha 90.00 _cell_angle_beta 97.048(3) _cell_angle_gamma 90.00 _cell_formula_units_Z 2 _cell_length_a 5.3851(2) _cell_length_b 12.6233(6) _cell_length_c 13.3282(6) _cell_measurement_reflns_used 1360 _cell_measurement_temperature 296(2) _cell_measurement_theta_max 24.21 _cell_measurement_theta_min 2.23 _cell_volume 899.17(7) _computing_cell_refinement APEX2 _computing_data_collection 'APEX2 (Bruker, 2005)' _computing_data_reduction APEX2 _computing_molecular_graphics 'SHELXTL (Bruker, 1997)' _computing_publication_material 'WinGX (Farrugia, 1999)' _computing_structure_refinement 'SHELXL97 (Sheldrick, 1997)' _computing_structure_solution 'SIR97 (Altomare et al., 1999)' _diffrn_ambient_temperature 296(2) _diffrn_measured_fraction_theta_full 0.998 _diffrn_measured_fraction_theta_max 0.998 _diffrn_measurement_device_type 'Bruker APEXII CCD area-detector' _diffrn_measurement_method '\f and \w' _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0215 _diffrn_reflns_av_sigmaI/netI 0.0362 _diffrn_reflns_limit_h_max 7 _diffrn_reflns_limit_h_min -3 _diffrn_reflns_limit_k_max 13 _diffrn_reflns_limit_k_min -16 _diffrn_reflns_limit_l_max 17 _diffrn_reflns_limit_l_min -17 _diffrn_reflns_number 4768 _diffrn_reflns_theta_full 27.54 _diffrn_reflns_theta_max 27.54 _diffrn_reflns_theta_min 2.23 _diffrn_standards_number 0 _exptl_absorpt_coefficient_mu 0.298 _exptl_absorpt_correction_T_max 0.98 _exptl_absorpt_correction_T_min 0.93 _exptl_absorpt_correction_type multi-scan _exptl_absorpt_process_details '(APEX2; Bruker, 2005)' _exptl_crystal_colour colourless _exptl_crystal_density_diffrn 1.235 _exptl_crystal_density_method 'not measured' _exptl_crystal_description prism _exptl_crystal_F_000 356 _exptl_crystal_size_max 0.24 _exptl_crystal_size_mid 0.17 _exptl_crystal_size_min 0.08 _refine_diff_density_max 0.166 _refine_diff_density_min -0.158 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.028 _refine_ls_hydrogen_treatment constr _refine_ls_matrix_type full _refine_ls_number_parameters 102 _refine_ls_number_reflns 2067 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.028 _refine_ls_R_factor_all 0.0708 _refine_ls_R_factor_gt 0.0411 _refine_ls_shift/su_max 0.000 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.0474P)^2^+0.1008P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.0954 _refine_ls_wR_factor_ref 0.1086 _reflns_number_gt 1398 _reflns_number_total 2067 _reflns_threshold_expression I>2\s(I) _[local]_cod_data_source_file om2134.cif loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, y+1/2, -z+1/2' '-x, -y, -z' 'x, -y-1/2, z-1/2' loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' S S 0.1246 0.1234 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _atom_site_type_symbol _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy C C1 -0.7375(4) 0.7125(2) 0.12509(18) 0.0826(8) Uani d . 1 H H1A -0.8199 0.6453 0.1274 0.124 Uiso calc R 1 H H1B -0.6684 0.7189 0.0623 0.124 Uiso calc R 1 H H1C -0.8561 0.7684 0.1303 0.124 Uiso calc R 1 C C2 -0.5309(4) 0.72010(18) 0.21157(16) 0.0593(6) Uani d . 1 C C3 -0.5043(4) 0.80616(17) 0.27491(17) 0.0644(6) Uani d . 1 H H3A -0.6156 0.8626 0.2653 0.077 Uiso calc R 1 C C4 -0.3120(4) 0.80799(16) 0.35237(16) 0.0597(5) Uani d . 1 C C5 -0.2650(5) 0.89945(18) 0.4234(2) 0.0888(8) Uani d . 1 H H5A -0.0991 0.9262 0.4207 0.133 Uiso calc R 1 H H5B -0.2810 0.8765 0.4910 0.133 Uiso calc R 1 H H5C -0.3847 0.9544 0.4043 0.133 Uiso calc R 1 C C6 -0.1932(3) 0.64617(15) 0.30250(14) 0.0474(5) Uani d . 1 C C7 0.2211(3) 0.57281(15) 0.42539(14) 0.0468(5) Uani d . 1 H H7A 0.3101 0.6365 0.4101 0.056 Uiso calc R 1 H H7B 0.1287 0.5882 0.4817 0.056 Uiso calc R 1 C C8 0.4073(3) 0.48445(14) 0.45449(14) 0.0463(5) Uani d . 1 H H8A 0.4976 0.4685 0.3977 0.056 Uiso calc R 1 H H8B 0.3180 0.4211 0.4704 0.056 Uiso calc R 1 N N1 -0.1516(3) 0.72556(12) 0.36750(12) 0.0534(4) Uani d . 1 N N2 -0.3725(3) 0.63767(13) 0.22425(12) 0.0567(5) Uani d . 1 S S1 0.00656(9) 0.53510(4) 0.31687(4) 0.0528(2) Uani d . 1 loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 C1 0.0707(16) 0.0858(18) 0.0830(17) 0.0020(13) -0.0240(13) 0.0300(14) C2 0.0504(12) 0.0619(14) 0.0631(13) 0.0006(10) -0.0028(10) 0.0260(11) C3 0.0632(14) 0.0549(13) 0.0734(15) 0.0158(11) 0.0012(12) 0.0223(12) C4 0.0660(14) 0.0503(12) 0.0620(13) 0.0082(10) 0.0038(11) 0.0121(10) C5 0.114(2) 0.0588(15) 0.0897(19) 0.0248(14) -0.0033(16) -0.0057(13) C6 0.0422(11) 0.0478(11) 0.0512(11) -0.0011(8) 0.0013(9) 0.0101(9) C7 0.0406(10) 0.0460(10) 0.0516(11) 0.0035(8) -0.0026(8) 0.0025(9) C8 0.0374(10) 0.0492(11) 0.0513(11) 0.0042(8) 0.0009(8) -0.0004(9) N1 0.0521(10) 0.0470(9) 0.0589(10) 0.0050(8) -0.0017(8) 0.0052(8) N2 0.0507(10) 0.0589(10) 0.0566(11) -0.0007(8) -0.0085(8) 0.0122(8) S1 0.0477(3) 0.0492(3) 0.0580(3) 0.0055(2) -0.0083(2) -0.0025(2) loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_site_symmetry_2 _geom_bond_distance C1 C2 . 1.503(3) C1 H1A . 0.9600 C1 H1B . 0.9600 C1 H1C . 0.9600 C2 N2 . 1.343(2) C2 C3 . 1.372(3) C3 C4 . 1.370(3) C3 H3A . 0.9300 C4 N1 . 1.352(2) C4 C5 . 1.495(3) C5 H5A . 0.9600 C5 H5B . 0.9600 C5 H5C . 0.9600 C6 N1 . 1.326(2) C6 N2 . 1.336(2) C6 S1 . 1.7631(19) C7 C8 . 1.518(2) C7 S1 . 1.8009(18) C7 H7A . 0.9700 C7 H7B . 0.9700 C8 C8 3_666 1.525(3) C8 H8A . 0.9700 C8 H8B . 0.9700 loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle_site_symmetry_1 _geom_angle_site_symmetry_3 _geom_angle C2 C1 H1A . . 109.5 C2 C1 H1B . . 109.5 H1A C1 H1B . . 109.5 C2 C1 H1C . . 109.5 H1A C1 H1C . . 109.5 H1B C1 H1C . . 109.5 N2 C2 C3 . . 121.27(19) N2 C2 C1 . . 116.5(2) C3 C2 C1 . . 122.3(2) C4 C3 C2 . . 119.29(19) C4 C3 H3A . . 120.4 C2 C3 H3A . . 120.4 N1 C4 C3 . . 120.6(2) N1 C4 C5 . . 116.38(19) C3 C4 C5 . . 123.0(2) C4 C5 H5A . . 109.5 C4 C5 H5B . . 109.5 H5A C5 H5B . . 109.5 C4 C5 H5C . . 109.5 H5A C5 H5C . . 109.5 H5B C5 H5C . . 109.5 N1 C6 N2 . . 128.23(17) N1 C6 S1 . . 118.57(14) N2 C6 S1 . . 113.20(15) C8 C7 S1 . . 110.46(13) C8 C7 H7A . . 109.6 S1 C7 H7A . . 109.6 C8 C7 H7B . . 109.6 S1 C7 H7B . . 109.6 H7A C7 H7B . . 108.1 C7 C8 C8 . 3_666 111.19(19) C7 C8 H8A . . 109.4 C8 C8 H8A 3_666 . 109.4 C7 C8 H8B . . 109.4 C8 C8 H8B 3_666 . 109.4 H8A C8 H8B . . 108.0 C6 N1 C4 . . 115.51(17) C6 N2 C2 . . 115.04(18) C6 S1 C7 . . 101.52(9) loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion_site_symmetry_4 _geom_torsion N2 C2 C3 C4 . 0.1(3) C1 C2 C3 C4 . 179.9(2) C2 C3 C4 N1 . -0.9(3) C2 C3 C4 C5 . 178.5(2) S1 C7 C8 C8 3_666 179.27(17) N2 C6 N1 C4 . 0.2(3) S1 C6 N1 C4 . -179.78(15) C3 C4 N1 C6 . 0.7(3) C5 C4 N1 C6 . -178.67(19) N1 C6 N2 C2 . -0.9(3) S1 C6 N2 C2 . 179.09(14) C3 C2 N2 C6 . 0.7(3) C1 C2 N2 C6 . -179.14(17) N1 C6 S1 C7 . -0.55(17) N2 C6 S1 C7 . 179.49(13) C8 C7 S1 C6 . 177.54(13)