#------------------------------------------------------------------------------ #$Date: 2025-08-19 15:49:58 +0100 (Tue, 19 Aug 2025) $ #$Revision: 301806 $ #$URL: svn://www.crystallography.net/cod/cif/2/23/88/2238878.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2238878 loop_ _publ_author_name 'Ma, Yu-Hong' 'Yang, Hong-Wei' 'Hao, Jing-Tuan' 'Ma, Pi-Zhuang' 'Yao, Ting' _publ_section_title ; Poly[di-\m~9~-citrato-tetrasodiumzinc] ; _journal_coeditor_code HY2639 _journal_issue 12 _journal_name_full 'Acta Crystallographica Section E' _journal_page_first m672 _journal_paper_doi 10.1107/S1600536813030067 _journal_volume 69 _journal_year 2013 _chemical_formula_iupac '[Na4 Zn (C6 H5 O7)2]' _chemical_formula_moiety 'C12 H10 Na4 O14 Zn' _chemical_formula_sum 'C12 H10 Na4 O14 Zn' _chemical_formula_weight 535.55 _chemical_name_systematic ; Poly[di-\m~9~-citrato-tetrasodiumzinc] ; _space_group_IT_number 14 _symmetry_cell_setting monoclinic _symmetry_space_group_name_Hall '-P 2ybc' _symmetry_space_group_name_H-M 'P 1 21/c 1' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL-97 _cell_angle_alpha 90.00 _cell_angle_beta 113.66(3) _cell_angle_gamma 90.00 _cell_formula_units_Z 2 _cell_length_a 7.9642(16) _cell_length_b 12.530(3) _cell_length_c 8.7090(17) _cell_measurement_reflns_used 7740 _cell_measurement_temperature 293(2) _cell_measurement_theta_max 27.54 _cell_measurement_theta_min 3.02 _cell_volume 796.0(3) _computing_cell_refinement 'CrystalClear (Rigaku, 2005)' _computing_data_collection 'CrystalClear (Rigaku, 2005)' _computing_data_reduction 'CrystalClear (Rigaku, 2005)' _computing_molecular_graphics 'XP in SHELXTL (Sheldrick, 2008) and DIAMOND (Brandenburg, 1999)' _computing_publication_material 'SHELXTL (Sheldrick, 2008)' _computing_structure_refinement 'SHELXL97 (Sheldrick, 2008)' _computing_structure_solution 'SHELXS97 (Sheldrick, 2008)' _diffrn_ambient_temperature 293(2) _diffrn_measured_fraction_theta_full 0.999 _diffrn_measured_fraction_theta_max 0.999 _diffrn_measurement_device_type 'Rigaku SCXmini CCD' _diffrn_measurement_method '\w scan' _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0482 _diffrn_reflns_av_sigmaI/netI 0.0383 _diffrn_reflns_limit_h_max 10 _diffrn_reflns_limit_h_min -10 _diffrn_reflns_limit_k_max 16 _diffrn_reflns_limit_k_min -16 _diffrn_reflns_limit_l_max 11 _diffrn_reflns_limit_l_min -11 _diffrn_reflns_number 8270 _diffrn_reflns_theta_full 27.48 _diffrn_reflns_theta_max 27.48 _diffrn_reflns_theta_min 3.03 _exptl_absorpt_coefficient_mu 1.739 _exptl_absorpt_correction_T_max 0.7223 _exptl_absorpt_correction_T_min 0.7115 _exptl_absorpt_correction_type multi-scan _exptl_absorpt_process_details '(ABSCOR; Higashi, 1995)' _exptl_crystal_colour colorless _exptl_crystal_density_diffrn 2.234 _exptl_crystal_density_method 'not measured' _exptl_crystal_description block _exptl_crystal_F_000 536 _exptl_crystal_size_max 0.21 _exptl_crystal_size_mid 0.21 _exptl_crystal_size_min 0.20 _refine_diff_density_max 0.366 _refine_diff_density_min -0.465 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.149 _refine_ls_hydrogen_treatment mixed _refine_ls_matrix_type full _refine_ls_number_parameters 145 _refine_ls_number_reflns 1831 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.149 _refine_ls_R_factor_all 0.0490 _refine_ls_R_factor_gt 0.0367 _refine_ls_shift/su_max 0.001 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.0289P)^2^+0.3351P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.0712 _refine_ls_wR_factor_ref 0.0745 _reflns_number_gt 1570 _reflns_number_total 1831 _reflns_threshold_expression I>2\s(I) _cod_data_source_file hy2639.cif _cod_data_source_block I _cod_original_sg_symbol_H-M 'P 21/c' _cod_database_code 2238878 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, y+1/2, -z+1/2' '-x, -y, -z' 'x, -y-1/2, z-1/2' loop_ _atom_site_type_symbol _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_symmetry_multiplicity O O7 0.4930(2) 0.98761(13) 0.7363(2) 0.0127(4) Uani d . 1 1 O O3 0.2766(2) 0.89905(13) 0.4482(2) 0.0178(4) Uani d . 1 1 O O4 0.1751(2) 0.77628(13) 0.5749(2) 0.0175(4) Uani d . 1 1 O O6 0.8225(3) 0.72885(15) 0.7149(2) 0.0233(4) Uani d . 1 1 O O5 0.6783(2) 0.87114(13) 0.5716(2) 0.0175(4) Uani d . 1 1 C C8 0.7041(3) 0.8007(2) 0.6829(3) 0.0141(5) Uani d . 1 1 C C4 0.2806(3) 0.84956(19) 0.5774(3) 0.0124(5) Uani d . 1 1 C C5 0.5911(3) 0.80021(19) 0.7885(3) 0.0132(5) Uani d . 1 1 H H5A 0.6748 0.8118 0.9042 0.016 Uiso calc R 1 1 H H5B 0.5407 0.7291 0.7822 0.016 Uiso calc R 1 1 C C3 0.4328(3) 0.87982(18) 0.7479(3) 0.0118(5) Uani d . 1 1 C C2 0.3615(3) 0.87711(19) 0.8861(3) 0.0144(5) Uani d . 1 1 H H2A 0.3180 0.8056 0.8920 0.017 Uiso calc R 1 1 H H2B 0.4629 0.8916 0.9923 0.017 Uiso calc R 1 1 O O2 0.1969(2) 0.98895(14) 0.9984(2) 0.0179(4) Uani d . 1 1 Zn Zn1 0.5000 1.0000 0.5000 0.01321(12) Uani d S 1 2 Na Na2 -0.05408(14) 1.12137(8) 0.83937(13) 0.0216(3) Uani d . 1 1 Na Na1 0.10230(14) 1.11830(8) 0.53517(13) 0.0222(3) Uani d . 1 1 O O1 0.1002(2) 0.98321(13) 0.7212(2) 0.0186(4) Uani d . 1 1 C C1 0.2085(3) 0.95534(19) 0.8644(3) 0.0131(5) Uani d . 1 1 H H1 0.606(4) 1.000(2) 0.828(4) 0.016 Uiso d . 1 1 loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 O7 0.0154(9) 0.0111(9) 0.0118(9) -0.0021(7) 0.0057(7) -0.0007(7) O3 0.0185(9) 0.0207(10) 0.0114(9) -0.0038(8) 0.0030(8) 0.0027(7) O4 0.0173(9) 0.0160(9) 0.0210(10) -0.0047(7) 0.0095(8) -0.0030(7) O6 0.0225(10) 0.0256(11) 0.0245(11) 0.0128(8) 0.0123(9) 0.0071(8) O5 0.0223(10) 0.0168(9) 0.0180(9) 0.0037(7) 0.0127(8) 0.0041(7) C8 0.0123(12) 0.0156(13) 0.0137(12) 0.0008(10) 0.0045(10) -0.0014(10) C4 0.0110(12) 0.0132(12) 0.0151(12) 0.0031(9) 0.0072(10) -0.0014(9) C5 0.0145(12) 0.0127(12) 0.0131(12) 0.0023(10) 0.0065(10) 0.0017(9) C3 0.0136(12) 0.0104(11) 0.0123(12) -0.0003(9) 0.0062(10) 0.0028(9) C2 0.0155(12) 0.0160(13) 0.0134(13) 0.0014(10) 0.0076(11) 0.0024(10) O2 0.0176(9) 0.0229(10) 0.0162(9) 0.0018(8) 0.0098(8) -0.0047(7) Zn1 0.0152(2) 0.0130(2) 0.0124(2) 0.00022(17) 0.00663(17) 0.00209(16) Na2 0.0197(5) 0.0236(6) 0.0216(6) 0.0023(4) 0.0084(5) -0.0013(4) Na1 0.0208(6) 0.0253(6) 0.0223(6) -0.0022(4) 0.0105(5) -0.0007(4) O1 0.0178(9) 0.0208(10) 0.0159(9) 0.0024(7) 0.0053(8) 0.0006(7) C1 0.0134(12) 0.0113(11) 0.0165(13) -0.0039(10) 0.0080(11) -0.0011(10) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Na Na 0.0362 0.0249 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Zn Zn 0.2839 1.4301 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle_site_symmetry_1 _geom_angle_site_symmetry_3 _geom_angle C3 O7 Zn1 . . 106.16(13) C4 O3 Zn1 . . 112.86(16) C4 O3 Na2 . 3_576 127.44(16) Zn1 O3 Na2 . 3_576 119.59(8) C4 O4 Na2 . 2_546 160.44(17) C4 O4 Na1 . 3_576 96.18(14) Na2 O4 Na1 2_546 3_576 98.47(7) C8 O6 Na1 . 2_646 119.97(16) C8 O6 Na2 . 2_646 154.24(17) Na1 O6 Na2 2_646 2_646 85.80(7) C8 O5 Zn1 . . 130.84(16) C8 O5 Na1 . 3_676 115.86(16) Zn1 O5 Na1 . 3_676 112.04(8) O6 C8 O5 . . 123.2(2) O6 C8 C5 . . 116.0(2) O5 C8 C5 . . 120.8(2) O4 C4 O3 . . 124.7(2) O4 C4 C3 . . 117.7(2) O3 C4 C3 . . 117.6(2) C8 C5 C3 . . 119.2(2) O7 C3 C2 . . 108.32(19) O7 C3 C5 . . 110.93(19) C2 C3 C5 . . 109.63(19) O7 C3 C4 . . 108.45(18) C2 C3 C4 . . 110.9(2) C5 C3 C4 . . 108.56(19) C1 C2 C3 . . 115.0(2) C1 O2 Na2 . . 92.67(15) C1 O2 Na2 . 3_577 122.64(15) Na2 O2 Na2 . 3_577 103.20(7) O5 Zn1 O5 3_676 . 180.0 O5 Zn1 O3 3_676 3_676 90.85(7) O5 Zn1 O3 . 3_676 89.15(7) O5 Zn1 O3 3_676 . 89.15(7) O5 Zn1 O3 . . 90.85(7) O3 Zn1 O3 3_676 . 180.0000(10) O5 Zn1 O7 3_676 3_676 86.09(7) O5 Zn1 O7 . 3_676 93.91(7) O3 Zn1 O7 3_676 3_676 79.02(7) O3 Zn1 O7 . 3_676 100.98(7) O5 Zn1 O7 3_676 . 93.91(7) O5 Zn1 O7 . . 86.09(7) O3 Zn1 O7 3_676 . 100.98(7) O3 Zn1 O7 . . 79.02(7) O7 Zn1 O7 3_676 . 180.0000(10) O5 Zn1 Na1 3_676 . 35.88(5) O5 Zn1 Na1 . . 144.12(5) O3 Zn1 Na1 3_676 . 115.73(5) O3 Zn1 Na1 . . 64.27(5) O7 Zn1 Na1 3_676 . 115.05(6) O7 Zn1 Na1 . . 64.95(6) O5 Zn1 Na1 3_676 3_676 144.12(5) O5 Zn1 Na1 . 3_676 35.88(5) O3 Zn1 Na1 3_676 3_676 64.27(5) O3 Zn1 Na1 . 3_676 115.73(5) O7 Zn1 Na1 3_676 3_676 64.95(6) O7 Zn1 Na1 . 3_676 115.05(6) Na1 Zn1 Na1 . 3_676 180.0 O4 Na2 O3 2_556 3_576 100.76(7) O4 Na2 O6 2_556 2_656 92.41(7) O3 Na2 O6 3_576 2_656 98.70(7) O4 Na2 O2 2_556 . 132.94(7) O3 Na2 O2 3_576 . 125.58(7) O6 Na2 O2 2_656 . 88.62(7) O4 Na2 O2 2_556 3_577 86.70(7) O3 Na2 O2 3_576 3_577 102.18(7) O6 Na2 O2 2_656 3_577 158.90(8) O2 Na2 O2 . 3_577 76.80(7) O4 Na2 O1 2_556 . 168.90(7) O3 Na2 O1 3_576 . 77.54(7) O6 Na2 O1 2_656 . 77.12(7) O2 Na2 O1 . . 51.60(6) O2 Na2 O1 3_577 . 104.40(7) O4 Na2 Na1 2_556 . 125.09(6) O3 Na2 Na1 3_576 . 62.16(5) O6 Na2 Na1 2_656 . 46.67(5) O2 Na2 Na1 . . 87.87(5) O2 Na2 Na1 3_577 . 145.37(6) O1 Na2 Na1 . . 44.35(5) O4 Na2 Na1 2_556 4_586 40.79(5) O3 Na2 Na1 3_576 4_586 123.00(6) O6 Na2 Na1 2_656 4_586 57.61(5) O2 Na2 Na1 . 4_586 106.39(6) O2 Na2 Na1 3_577 4_586 111.68(5) O1 Na2 Na1 . 4_586 131.31(6) Na1 Na2 Na1 . 4_586 102.34(4) O4 Na2 Na2 2_556 3_577 113.39(6) O3 Na2 Na2 3_576 3_577 120.36(6) O6 Na2 Na2 2_656 3_577 125.52(7) O2 Na2 Na2 . 3_577 38.48(4) O2 Na2 Na2 3_577 3_577 38.32(4) O1 Na2 Na2 . 3_577 76.31(5) Na1 Na2 Na2 . 3_577 120.15(4) Na1 Na2 Na2 4_586 3_577 114.57(5) O5 Na1 O1 3_676 . 122.68(8) O5 Na1 O4 3_676 3_576 122.16(7) O1 Na1 O4 . 3_576 114.15(7) O5 Na1 O6 3_676 2_656 112.02(8) O1 Na1 O6 . 2_656 82.02(7) O4 Na1 O6 3_576 2_656 84.37(8) O5 Na1 O1 3_676 3_576 89.47(7) O1 Na1 O1 . 3_576 93.91(7) O4 Na1 O1 3_576 3_576 76.45(7) O6 Na1 O1 2_656 3_576 156.79(8) O5 Na1 C4 3_676 3_576 137.95(8) O1 Na1 C4 . 3_576 92.09(8) O4 Na1 C4 3_576 3_576 25.78(6) O6 Na1 C4 2_656 3_576 94.17(8) O1 Na1 C4 3_576 3_576 63.03(7) O5 Na1 C8 3_676 3_676 21.85(6) O1 Na1 C8 . 3_676 144.32(8) O4 Na1 C8 3_576 3_676 100.39(7) O6 Na1 C8 2_656 3_676 111.12(7) O1 Na1 C8 3_576 3_676 85.42(7) C4 Na1 C8 3_576 3_676 118.60(8) O5 Na1 Na1 3_676 3_576 112.02(7) O1 Na1 Na1 . 3_576 49.04(5) O4 Na1 Na1 3_576 3_576 96.43(6) O6 Na1 Na1 2_656 3_576 126.69(7) O1 Na1 Na1 3_576 3_576 44.88(5) C4 Na1 Na1 3_576 3_576 71.49(6) C8 Na1 Na1 3_676 3_576 120.93(7) O5 Na1 Na2 3_676 . 155.15(7) O1 Na1 Na2 . . 49.81(5) O4 Na1 Na2 3_576 . 74.74(5) O6 Na1 Na2 2_656 . 47.54(5) O1 Na1 Na2 3_576 . 113.50(6) C4 Na1 Na2 3_576 . 65.27(6) C8 Na1 Na2 3_676 . 157.96(6) Na1 Na1 Na2 3_576 . 81.11(4) O5 Na1 Zn1 3_676 . 32.08(5) O1 Na1 Zn1 . . 90.68(6) O4 Na1 Zn1 3_576 . 151.83(6) O6 Na1 Zn1 2_656 . 113.43(6) O1 Na1 Zn1 3_576 . 89.37(5) C4 Na1 Zn1 3_576 . 152.38(6) C8 Na1 Zn1 3_676 . 53.66(5) Na1 Na1 Zn1 3_576 . 90.01(4) Na2 Na1 Zn1 . . 133.42(4) O5 Na1 Na2 3_676 4_585 86.09(5) O1 Na1 Na2 . 4_585 150.32(6) O4 Na1 Na2 3_576 4_585 40.74(5) O6 Na1 Na2 2_656 4_585 79.96(6) O1 Na1 Na2 3_576 4_585 93.45(6) C4 Na1 Na2 3_576 4_585 66.06(6) C8 Na1 Na2 3_676 4_585 64.99(5) Na1 Na1 Na2 3_576 4_585 131.30(6) Na2 Na1 Na2 . 4_585 101.14(3) Zn1 Na1 Na2 . 4_585 118.12(3) C1 O1 Na1 . . 134.25(16) C1 O1 Na1 . 3_576 133.31(16) Na1 O1 Na1 . 3_576 86.09(7) C1 O1 Na2 . . 92.17(15) Na1 O1 Na2 . . 85.84(6) Na1 O1 Na2 3_576 . 117.27(8) O1 C1 O2 . . 123.1(2) O1 C1 C2 . . 120.3(2) O2 C1 C2 . . 116.6(2) Zn1 O7 H1 . . 115(2) C3 O7 H1 . . 108.9(16) C1 C2 H2A . . 109 C1 C2 H2B . . 109 C3 C2 H2A . . 108 C3 C2 H2B . . 109 H2A C2 H2B . . 108 C3 C5 H5A . . 107 C3 C5 H5B . . 108 C8 C5 H5A . . 107 C8 C5 H5B . . 108 H5A C5 H5B . . 107 loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_site_symmetry_2 _geom_bond_distance O7 C3 . 1.450(3) O7 Zn1 . 2.0866(17) O3 C4 . 1.274(3) O3 Zn1 . 2.0796(17) O3 Na2 3_576 2.432(2) O4 C4 . 1.239(3) O4 Na2 2_546 2.415(2) O4 Na1 3_576 2.417(2) O6 C8 . 1.251(3) O6 Na1 2_646 2.443(2) O6 Na2 2_646 2.478(2) O5 C8 . 1.266(3) O5 Zn1 . 2.0742(17) O5 Na1 3_676 2.288(2) C8 C5 . 1.523(3) C8 Na1 3_676 3.061(3) C4 C3 . 1.540(3) C4 Na1 3_576 2.833(3) C5 C3 . 1.534(3) C3 C2 . 1.523(3) C2 C1 . 1.516(3) O2 C1 . 1.279(3) O2 Na2 . 2.539(2) Zn1 O5 3_676 2.0742(17) Zn1 O3 3_676 2.0796(17) Zn1 O7 3_676 2.0866(17) Na2 O4 2_556 2.415(2) Na2 O3 3_576 2.432(2) Na2 O6 2_656 2.478(2) Na2 O2 3_577 2.548(2) Na2 O1 . 2.565(2) Na1 O5 3_676 2.288(2) Na1 O1 . 2.348(2) Na1 O4 3_576 2.417(2) Na1 O6 2_656 2.443(2) Na1 O1 3_576 2.512(2) Na1 C4 3_576 2.833(3) Na1 C8 3_676 3.061(3) O1 C1 . 1.248(3) O7 H1 . 0.95(3) C2 H2A . 0.97 C2 H2B . 0.97 C5 H5A . 0.97 C5 H5B . 0.97 loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_site_symmetry_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA O7 H1 O2 3_677 0.95(3) 1.69(3) 2.635(2) 174(3) loop_ _cod_related_entry_id _cod_related_entry_database _cod_related_entry_code 1 PubChem 139086221