#------------------------------------------------------------------------------ #$Date: 2025-08-19 15:49:58 +0100 (Tue, 19 Aug 2025) $ #$Revision: 301806 $ #$URL: svn://www.crystallography.net/cod/cif/2/23/89/2238923.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2238923 loop_ _publ_author_name 'Yamuna, Thammarse S.' 'Jasinski, Jerry P.' 'Anderson, Brian J.' 'Yathirajan, H. S.' 'Kaur, Manpreet' _publ_section_title ; Raltegravir monohydrate ; _journal_coeditor_code SJ5363 _journal_issue 12 _journal_name_full 'Acta Crystallographica Section E' _journal_page_first o1743 _journal_page_last o1744 _journal_paper_doi 10.1107/S1600536813029747 _journal_volume 69 _journal_year 2013 _chemical_formula_iupac 'C20 H21 F N6 O5, H2 O' _chemical_formula_moiety 'C20 H21 F N6 O5, H2 O' _chemical_formula_sum 'C20 H23 F N6 O6' _chemical_formula_weight 462.44 _chemical_name_common ; Raltegravir monohydrate ; _chemical_name_systematic 'N-(4-fluorobenzyl)-5-hydroxy-1-methyl-2-{1-methyl-1-[(5-methyl-1,3,4-oxadiazol-2-ylcarbonyl)amino]ethyl}-6-oxo-1,6-dihydropyrimidine-4-carboxamide monohydrate' _space_group_crystal_system triclinic _space_group_IT_number 2 _space_group_name_Hall '-P 1' _space_group_name_H-M_alt 'P -1' _symmetry_space_group_name_Hall '-P 1' _symmetry_space_group_name_H-M 'P -1' _atom_sites_solution_hydrogens mixed _atom_sites_solution_primary direct _audit_creation_method ; Olex2 1.2 (compiled Apr 23 2013 17:54:37, GUI svn.r4466) ; _cell_angle_alpha 110.481(7) _cell_angle_beta 108.093(7) _cell_angle_gamma 92.329(6) _cell_formula_units_Z 2 _cell_length_a 8.3860(6) _cell_length_b 11.8610(9) _cell_length_c 12.1102(9) _cell_measurement_reflns_used 3215 _cell_measurement_temperature 173(2) _cell_measurement_theta_max 32.8784 _cell_measurement_theta_min 3.0431 _cell_volume 1057.43(16) _computing_cell_refinement 'CrysAlis PRO (Agilent, 2012)' _computing_data_collection 'CrysAlis PRO (Agilent, 2012)' _computing_data_reduction 'CrysAlis RED (Agilent, 2012)' _computing_molecular_graphics 'OLEX2 (Dolomanov et al., 2009)' _computing_publication_material 'OLEX2 (Dolomanov et al., 2009)' _computing_structure_refinement 'SHELXL2012 (Sheldrick, 2008)' _computing_structure_solution 'SUPERFLIP (Palatinus & Chapuis, 2007)' _diffrn_ambient_temperature 173(2) _diffrn_detector_area_resol_mean 16.0416 _diffrn_measured_fraction_theta_full 0.996 _diffrn_measured_fraction_theta_max 0.883 _diffrn_measurement_device_type 'Agilent Xcalibur (Eos, Gemini)' _diffrn_measurement_method '\w scans' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0253 _diffrn_reflns_limit_h_max 12 _diffrn_reflns_limit_h_min -12 _diffrn_reflns_limit_k_max 17 _diffrn_reflns_limit_k_min -14 _diffrn_reflns_limit_l_max 18 _diffrn_reflns_limit_l_min -17 _diffrn_reflns_number 12734 _diffrn_reflns_theta_full 26.000 _diffrn_reflns_theta_max 32.953 _diffrn_reflns_theta_min 3.049 _exptl_absorpt_coefficient_mu 0.115 _exptl_absorpt_correction_T_max 1.00000 _exptl_absorpt_correction_T_min 0.89026 _exptl_absorpt_correction_type multi-scan _exptl_absorpt_process_details ; (CrysAlis PRO and CrysAlis RED; Agilent, 2012) ; _exptl_crystal_colour colourless _exptl_crystal_density_diffrn 1.452 _exptl_crystal_description irregular _exptl_crystal_F_000 484 _exptl_crystal_size_max 0.44 _exptl_crystal_size_mid 0.32 _exptl_crystal_size_min 0.26 _refine_diff_density_max 0.783 _refine_diff_density_min -0.393 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.028 _refine_ls_hydrogen_treatment constr _refine_ls_matrix_type full _refine_ls_number_parameters 306 _refine_ls_number_reflns 7007 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.028 _refine_ls_R_factor_all 0.0932 _refine_ls_R_factor_gt 0.0674 _refine_ls_shift/su_max 0.000 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'w=1/[\s^2^(Fo^2^)+(0.0974P)^2^+0.6433P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.1824 _refine_ls_wR_factor_ref 0.2060 _reflns_number_gt 5042 _reflns_number_total 7007 _reflns_threshold_expression I>2\s(I) _iucr_refine_instructions_details ; TITL HSY-623B in P-1 #2 CELL 0.71073 8.38604 11.86096 12.11024 110.4813 108.0927 92.3291 ZERR 2 0.00064 0.00088 0.00089 0.0068 0.0068 0.0062 LATT 1 SFAC C H N O F UNIT 40 46 12 12 2 EQIV $1 2-X,-Y,1-Z EQIV $2 2-X,1-Y,1-Z EQIV $3 2-X,-Y,2-Z EQIV $4 2-X,1-Y,2-Z EQIV $5 1-X,-Y,1-Z EQIV $6 1-X,-Y,-Z EQIV $7 +X,1+Y,+Z L.S. 25 PLAN 15 TEMP -100(2) HTAB O4 O5 HTAB N1 O5_$1 HTAB N4 O1W_$2 HTAB C7 O1W_$2 HTAB C10 O5_$3 HTAB C19 F1_$4 HTAB C20 O4_$5 HTAB C20 N1 HTAB C20 N6_$6 HTAB O1W O2 HTAB O1W O3_$7 HTAB O1W O4_$7 REM reset to P-1 #2 BOND $H MORE -1 fmap 2 acta 52 CONF OMIT 1 -7 2 OMIT -2 5 1 OMIT -2 -3 1 OMIT 4 3 0 OMIT -1 -3 2 OMIT 4 -4 3 OMIT 1 -2 1 OMIT -2 3 0 REM J:/yathirajan%202013/HSY-623B-jpjMK/HSY-623B.hkl WGHT 0.097400 0.643300 FVAR 7.49247 F1 5 1.155448 0.336877 1.316367 11.00000 0.07812 0.06427 = 0.03102 0.01031 0.02590 0.02816 O1 4 0.778486 0.365325 0.099014 11.00000 0.06112 0.03018 = 0.03256 0.01483 0.01385 0.00376 O2 4 0.712148 0.447188 0.326789 11.00000 0.05906 0.02296 = 0.03624 0.01411 0.01139 0.01161 O3 4 0.505674 -0.133264 0.346263 11.00000 0.03027 0.02906 = 0.04342 0.01464 0.00753 -0.00003 O4 4 0.768546 -0.164757 0.521104 11.00000 0.03789 0.02497 = 0.03902 0.01773 0.01423 0.00936 AFIX 147 H4 2 0.856990 -0.162854 0.578894 11.00000 -1.50000 AFIX 0 O5 4 1.049932 -0.057428 0.707619 11.00000 0.03905 0.03306 = 0.03194 0.01994 0.01516 0.01679 N1 3 0.753986 0.261426 0.338681 11.00000 0.03732 0.02205 = 0.02580 0.01174 0.01170 0.00950 AFIX 43 H1 2 0.766118 0.187538 0.295013 11.00000 -1.20000 AFIX 0 N2 3 0.624434 0.065429 0.401890 11.00000 0.02222 0.02344 = 0.02141 0.00866 0.00826 0.00660 N3 3 0.878752 0.155469 0.573173 11.00000 0.02632 0.02352 = 0.02078 0.00992 0.00888 0.00809 N4 3 1.148726 0.142337 0.760909 11.00000 0.03082 0.03351 = 0.02243 0.01395 0.00762 0.01041 AFIX 43 H4A 2 1.133353 0.206890 0.741398 11.00000 -1.20000 AFIX 0 N5 3 0.726865 0.177371 0.085755 11.00000 0.04313 0.02947 = 0.02758 0.01274 0.00501 0.00600 N6 3 0.747470 0.173214 -0.028281 11.00000 0.05209 0.03884 = 0.03057 0.01284 0.00595 0.00757 C1 1 0.754581 0.286350 0.467150 11.00000 0.02773 0.02098 = 0.02308 0.00961 0.00761 0.00798 C2 1 0.753148 0.163069 0.482640 11.00000 0.02366 0.02059 = 0.02087 0.00778 0.01002 0.00704 C3 1 0.622052 -0.046880 0.414743 11.00000 0.02606 0.02385 = 0.02753 0.01053 0.01330 0.00639 C4 1 0.767679 -0.054802 0.513627 11.00000 0.02844 0.02354 = 0.02642 0.01226 0.01536 0.00992 C5 1 0.886581 0.046418 0.589239 11.00000 0.02674 0.02475 = 0.02013 0.01093 0.01152 0.01040 C6 1 1.035995 0.041081 0.691733 11.00000 0.03077 0.03047 = 0.02098 0.01330 0.01460 0.01400 C7 1 1.298341 0.152144 0.868741 11.00000 0.02871 0.04549 = 0.02608 0.01657 0.00666 0.01255 AFIX 23 H7A 2 1.395121 0.206229 0.873129 11.00000 -1.20000 H7B 2 1.330584 0.070460 0.856754 11.00000 -1.20000 AFIX 0 C8 1 1.264189 0.202298 0.990298 11.00000 0.02633 0.02949 = 0.02246 0.01094 0.00301 0.00760 C9 1 1.188252 0.125344 1.029766 11.00000 0.03558 0.02579 = 0.02548 0.00783 0.00725 0.00370 AFIX 43 H9 2 1.161869 0.040117 0.980993 11.00000 -1.20000 AFIX 0 C10 1 1.149766 0.170085 1.139229 11.00000 0.03385 0.03769 = 0.02821 0.01393 0.00907 0.00427 AFIX 43 H10 2 1.095873 0.117036 1.165184 11.00000 -1.20000 AFIX 0 C11 1 1.191911 0.292797 1.208323 11.00000 0.04391 0.04079 = 0.02332 0.00951 0.00954 0.01616 C12 1 1.271043 0.372287 1.174149 11.00000 0.08586 0.02586 = 0.03682 0.00326 0.01856 0.00827 AFIX 43 H12 2 1.300683 0.456978 1.225154 11.00000 -1.20000 AFIX 0 C13 1 1.306724 0.326369 1.063745 11.00000 0.06189 0.02969 = 0.03764 0.01373 0.01456 -0.00047 AFIX 43 H13 2 1.360444 0.380012 1.038323 11.00000 -1.20000 AFIX 0 C14 1 0.736355 0.342817 0.283197 11.00000 0.03663 0.02430 = 0.02702 0.01288 0.00589 0.00463 C15 1 0.746493 0.289532 0.154033 11.00000 0.03645 0.02671 = 0.02920 0.01455 0.00544 0.00355 C16 1 0.776584 0.285709 -0.015323 11.00000 0.04082 0.04073 = 0.02885 0.01264 0.00561 0.00219 C17 1 0.809162 0.333796 -0.104856 11.00000 0.07952 0.05751 = 0.04257 0.02529 0.01685 0.00244 AFIX 137 H17A 2 0.714817 0.374094 -0.134893 11.00000 -1.50000 H17B 2 0.818972 0.266384 -0.176320 11.00000 -1.50000 H17C 2 0.915324 0.392830 -0.062785 11.00000 -1.50000 AFIX 0 C18 1 0.601495 0.344307 0.492088 11.00000 0.03337 0.02930 = 0.03738 0.01089 0.01465 0.01415 AFIX 137 H18A 2 0.620793 0.431073 0.506252 11.00000 -1.50000 H18B 2 0.588540 0.335780 0.566611 11.00000 -1.50000 H18C 2 0.497887 0.302892 0.419245 11.00000 -1.50000 AFIX 0 C19 1 0.918354 0.373817 0.560343 11.00000 0.03221 0.02410 = 0.03427 0.01178 0.00408 0.00268 AFIX 137 H19A 2 1.016798 0.337474 0.546406 11.00000 -1.50000 H19B 2 0.923415 0.388868 0.646353 11.00000 -1.50000 H19C 2 0.919807 0.451165 0.547994 11.00000 -1.50000 AFIX 0 C20 1 0.476941 0.069945 0.298781 11.00000 0.02411 0.03074 = 0.02647 0.01135 0.00601 0.00610 AFIX 137 H20A 2 0.383688 0.093533 0.330019 11.00000 -1.50000 H20B 2 0.439556 -0.010690 0.230243 11.00000 -1.50000 H20C 2 0.509789 0.129986 0.267719 11.00000 -1.50000 AFIX 6 O1W 4 0.637687 0.637438 0.233223 11.00000 0.12148 0.03883 = 0.05189 0.02405 0.02417 0.03086 H1WA 2 0.625498 0.690012 0.297666 11.00000 -1.50000 H1WB 2 0.663039 0.574089 0.247775 11.00000 -1.50000 AFIX 0 HKLF 4 REM HSY-623B in P-1 #2 REM R1 = 0.0674 for 5042 Fo > 4sig(Fo) and 0.0932 for all 7007 data REM 306 parameters refined using 0 restraints END WGHT 0.0974 0.6432 REM Highest difference peak 0.783, deepest hole -0.393, 1-sigma level 0.070 Q1 1 0.6576 0.3792 0.0917 11.00000 0.05 0.78 Q2 1 0.8414 0.4042 -0.0160 11.00000 0.05 0.77 Q3 1 0.6860 0.3597 -0.0159 11.00000 0.05 0.74 Q4 1 0.8735 0.3600 -0.1431 11.00000 0.05 0.68 Q5 1 0.9528 0.4516 0.0931 11.00000 0.05 0.65 Q6 1 0.9209 0.4972 0.0714 11.00000 0.05 0.47 Q7 1 0.5351 0.6010 0.2271 11.00000 0.05 0.44 Q8 1 0.8243 -0.0060 0.5489 11.00000 0.05 0.44 Q9 1 0.6959 -0.0571 0.4616 11.00000 0.05 0.42 Q10 1 0.6257 0.4423 0.3338 11.00000 0.05 0.37 Q11 1 0.8376 0.3277 0.5116 11.00000 0.05 0.36 Q12 1 1.2873 0.2587 1.0268 11.00000 0.05 0.34 Q13 1 0.9617 0.0462 0.6418 11.00000 0.05 0.34 Q14 1 0.7655 0.2317 0.4860 11.00000 0.05 0.32 Q15 1 0.7796 0.2296 0.1313 11.00000 0.05 0.32 ; _cod_data_source_file sj5363.cif _cod_data_source_block I _cod_original_cell_volume 1057.44(15) _cod_database_code 2238923 #BEGIN Tags that were not found in dictionaries: _shelx_space_group_comment ; The symmetry employed for this shelxl refinement is uniquely defined by the following loop, which should always be used as a source of symmetry information in preference to the above space-group names. They are only intended as comments. ; _shelx_hkl_checksum 31717 _shelx_res_checksum 66418 #END Tags that were not found in dictionaries loop_ _space_group_symop_operation_xyz 'x, y, z' '-x, -y, -z' loop_ _atom_site_type_symbol _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_occupancy F F1 1.1554(2) 0.33688(15) 1.31637(13) 0.0578(4) Uani d 1 O O1 0.7785(2) 0.36533(14) 0.09901(14) 0.0412(4) Uani d 1 O O2 0.7121(2) 0.44719(13) 0.32679(14) 0.0398(4) Uani d 1 O O3 0.50567(19) -0.13326(13) 0.34626(15) 0.0355(3) Uani d 1 O O4 0.76855(19) -0.16476(12) 0.52110(14) 0.0320(3) Uani d 1 H H4 0.8570 -0.1629 0.5789 0.048 Uiso calc 1 O O5 1.04993(19) -0.05743(13) 0.70762(13) 0.0315(3) Uani d 1 N N1 0.7540(2) 0.26143(14) 0.33868(14) 0.0273(3) Uani d 1 H H1 0.7661 0.1875 0.2950 0.033 Uiso calc 1 N N2 0.62443(18) 0.06543(13) 0.40189(13) 0.0221(3) Uani d 1 N N3 0.87875(19) 0.15547(13) 0.57317(13) 0.0228(3) Uani d 1 N N4 1.1487(2) 0.14234(15) 0.76091(14) 0.0282(3) Uani d 1 H H4A 1.1334 0.2069 0.7414 0.034 Uiso calc 1 N N5 0.7269(2) 0.17737(16) 0.08576(16) 0.0347(4) Uani d 1 N N6 0.7475(3) 0.17321(18) -0.02828(18) 0.0427(5) Uani d 1 C C1 0.7546(2) 0.28635(15) 0.46715(16) 0.0238(3) Uani d 1 C C2 0.7531(2) 0.16307(15) 0.48264(15) 0.0211(3) Uani d 1 C C3 0.6221(2) -0.04688(16) 0.41474(17) 0.0245(3) Uani d 1 C C4 0.7677(2) -0.05480(15) 0.51363(16) 0.0237(3) Uani d 1 C C5 0.8866(2) 0.04642(15) 0.58924(15) 0.0222(3) Uani d 1 C C6 1.0360(2) 0.04108(16) 0.69173(16) 0.0247(3) Uani d 1 C C7 1.2983(3) 0.1521(2) 0.86874(18) 0.0331(4) Uani d 1 H H7A 1.3951 0.2062 0.8731 0.040 Uiso calc 1 H H7B 1.3306 0.0705 0.8568 0.040 Uiso calc 1 C C8 1.2642(2) 0.20230(17) 0.99030(17) 0.0271(4) Uani d 1 C C9 1.1883(3) 0.12534(17) 1.02977(18) 0.0304(4) Uani d 1 H H9 1.1619 0.0401 0.9810 0.036 Uiso calc 1 C C10 1.1498(3) 0.17008(19) 1.13923(19) 0.0333(4) Uani d 1 H H10 1.0959 0.1170 1.1652 0.040 Uiso calc 1 C C11 1.1919(3) 0.2928(2) 1.20832(18) 0.0370(5) Uani d 1 C C12 1.2710(4) 0.3723(2) 1.1741(2) 0.0527(7) Uani d 1 H H12 1.3007 0.4570 1.2252 0.063 Uiso calc 1 C C13 1.3067(4) 0.3264(2) 1.0637(2) 0.0438(5) Uani d 1 H H13 1.3604 0.3800 1.0383 0.053 Uiso calc 1 C C14 0.7364(3) 0.34282(17) 0.28320(18) 0.0297(4) Uani d 1 C C15 0.7465(3) 0.28953(17) 0.15403(18) 0.0312(4) Uani d 1 C C16 0.7766(3) 0.2857(2) -0.0153(2) 0.0388(5) Uani d 1 C C17 0.8092(5) 0.3338(3) -0.1049(3) 0.0595(7) Uani d 1 H H17A 0.7148 0.3741 -0.1349 0.089 Uiso calc 1 H H17B 0.8190 0.2664 -0.1763 0.089 Uiso calc 1 H H17C 0.9153 0.3928 -0.0628 0.089 Uiso calc 1 C C18 0.6015(3) 0.34431(18) 0.4921(2) 0.0330(4) Uani d 1 H H18A 0.6208 0.4311 0.5063 0.049 Uiso calc 1 H H18B 0.5885 0.3358 0.5666 0.049 Uiso calc 1 H H18C 0.4979 0.3029 0.4192 0.049 Uiso calc 1 C C19 0.9184(3) 0.37382(17) 0.56034(19) 0.0319(4) Uani d 1 H H19A 1.0168 0.3375 0.5464 0.048 Uiso calc 1 H H19B 0.9234 0.3889 0.6464 0.048 Uiso calc 1 H H19C 0.9198 0.4512 0.5480 0.048 Uiso calc 1 C C20 0.4769(2) 0.06994(17) 0.29878(17) 0.0276(4) Uani d 1 H H20A 0.3837 0.0935 0.3300 0.041 Uiso calc 1 H H20B 0.4396 -0.0107 0.2302 0.041 Uiso calc 1 H H20C 0.5098 0.1300 0.2677 0.041 Uiso calc 1 O O1W 0.6377(4) 0.63744(18) 0.2332(2) 0.0697(7) Uani d 1 H H1WA 0.6255 0.6900 0.2977 0.105 Uiso d 1 H H1WB 0.6630 0.5741 0.2478 0.105 Uiso d 1 loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 F1 0.0781(11) 0.0643(10) 0.0310(7) 0.0282(8) 0.0259(7) 0.0103(7) O1 0.0611(10) 0.0302(7) 0.0326(7) 0.0038(7) 0.0138(7) 0.0148(6) O2 0.0591(10) 0.0230(7) 0.0362(8) 0.0116(6) 0.0114(7) 0.0141(6) O3 0.0303(7) 0.0291(7) 0.0434(8) 0.0000(5) 0.0075(6) 0.0146(6) O4 0.0379(7) 0.0250(6) 0.0390(8) 0.0094(5) 0.0142(6) 0.0177(6) O5 0.0391(7) 0.0331(7) 0.0319(7) 0.0168(6) 0.0152(6) 0.0199(6) N1 0.0373(8) 0.0221(7) 0.0258(7) 0.0095(6) 0.0117(6) 0.0117(6) N2 0.0222(6) 0.0234(7) 0.0214(6) 0.0066(5) 0.0083(5) 0.0087(5) N3 0.0263(7) 0.0235(7) 0.0208(6) 0.0081(5) 0.0089(5) 0.0099(5) N4 0.0308(8) 0.0335(8) 0.0224(7) 0.0104(6) 0.0076(6) 0.0139(6) N5 0.0431(10) 0.0295(8) 0.0276(8) 0.0060(7) 0.0050(7) 0.0127(6) N6 0.0521(11) 0.0388(10) 0.0306(9) 0.0076(8) 0.0060(8) 0.0128(7) C1 0.0277(8) 0.0210(7) 0.0231(7) 0.0080(6) 0.0076(6) 0.0096(6) C2 0.0237(7) 0.0206(7) 0.0209(7) 0.0070(6) 0.0100(6) 0.0078(6) C3 0.0261(8) 0.0239(8) 0.0275(8) 0.0064(6) 0.0133(7) 0.0105(6) C4 0.0284(8) 0.0235(8) 0.0264(8) 0.0099(6) 0.0154(7) 0.0123(6) C5 0.0267(8) 0.0247(8) 0.0201(7) 0.0104(6) 0.0115(6) 0.0109(6) C6 0.0308(8) 0.0305(8) 0.0210(7) 0.0140(7) 0.0146(7) 0.0133(6) C7 0.0287(9) 0.0455(11) 0.0261(8) 0.0126(8) 0.0067(7) 0.0166(8) C8 0.0263(8) 0.0295(9) 0.0225(8) 0.0076(7) 0.0030(6) 0.0109(7) C9 0.0356(9) 0.0258(8) 0.0255(8) 0.0037(7) 0.0072(7) 0.0078(7) C10 0.0339(10) 0.0377(10) 0.0282(9) 0.0043(8) 0.0091(8) 0.0139(8) C11 0.0439(11) 0.0408(11) 0.0233(8) 0.0162(9) 0.0095(8) 0.0095(8) C12 0.086(2) 0.0259(10) 0.0368(12) 0.0083(11) 0.0186(12) 0.0033(9) C13 0.0619(15) 0.0297(10) 0.0376(11) -0.0005(10) 0.0146(10) 0.0137(9) C14 0.0366(9) 0.0243(8) 0.0270(8) 0.0046(7) 0.0059(7) 0.0129(7) C15 0.0365(10) 0.0267(9) 0.0292(9) 0.0036(7) 0.0054(7) 0.0146(7) C16 0.0408(11) 0.0407(11) 0.0289(9) 0.0022(9) 0.0056(8) 0.0126(8) C17 0.080(2) 0.0575(16) 0.0426(13) 0.0024(14) 0.0169(13) 0.0253(12) C18 0.0334(9) 0.0293(9) 0.0374(10) 0.0141(7) 0.0147(8) 0.0109(8) C19 0.0322(9) 0.0241(8) 0.0343(9) 0.0027(7) 0.0041(8) 0.0118(7) C20 0.0241(8) 0.0307(9) 0.0265(8) 0.0061(7) 0.0060(7) 0.0113(7) O1W 0.121(2) 0.0388(10) 0.0519(11) 0.0309(12) 0.0242(13) 0.0241(9) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' F F 0.0171 0.0103 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle C15 O1 C16 102.68(16) C4 O4 H4 109.5 C1 N1 H1 117.4 C14 N1 H1 117.4 C14 N1 C1 125.12(15) C2 N2 C3 121.45(14) C2 N2 C20 124.45(14) C3 N2 C20 114.08(14) C2 N3 C5 119.27(15) C6 N4 H4A 118.4 C6 N4 C7 123.12(16) C7 N4 H4A 118.4 C15 N5 N6 106.18(17) C16 N6 N5 105.55(18) N1 C1 C2 106.42(13) N1 C1 C18 113.17(14) N1 C1 C19 108.21(15) C2 C1 C18 110.32(15) C19 C1 C2 110.05(14) C19 C1 C18 108.63(15) N2 C2 C1 120.93(14) N3 C2 N2 122.32(15) N3 C2 C1 116.75(15) O3 C3 N2 122.18(16) O3 C3 C4 122.56(16) N2 C3 C4 115.25(15) O4 C4 C3 114.82(16) O4 C4 C5 126.23(16) C5 C4 C3 118.95(15) N3 C5 C6 117.28(15) C4 C5 N3 122.65(15) C4 C5 C6 120.04(15) O5 C6 N4 123.62(16) O5 C6 C5 119.27(17) N4 C6 C5 117.11(15) N4 C7 H7A 109.3 N4 C7 H7B 109.3 N4 C7 C8 111.60(16) H7A C7 H7B 108.0 C8 C7 H7A 109.3 C8 C7 H7B 109.3 C9 C8 C7 120.34(17) C9 C8 C13 119.05(19) C13 C8 C7 120.60(19) C8 C9 H9 119.3 C8 C9 C10 121.39(18) C10 C9 H9 119.3 C9 C10 H10 121.1 C11 C10 C9 117.9(2) C11 C10 H10 121.1 F1 C11 C10 118.0(2) F1 C11 C12 119.3(2) C10 C11 C12 122.7(2) C11 C12 H12 120.6 C11 C12 C13 118.7(2) C13 C12 H12 120.6 C8 C13 H13 119.9 C12 C13 C8 120.2(2) C12 C13 H13 119.9 O2 C14 N1 126.78(19) O2 C14 C15 121.48(17) N1 C14 C15 111.74(16) O1 C15 C14 119.28(17) N5 C15 O1 113.46(18) N5 C15 C14 127.26(17) O1 C16 C17 119.6(2) N6 C16 O1 112.1(2) N6 C16 C17 128.3(2) C16 C17 H17A 109.5 C16 C17 H17B 109.5 C16 C17 H17C 109.5 H17A C17 H17B 109.5 H17A C17 H17C 109.5 H17B C17 H17C 109.5 C1 C18 H18A 109.5 C1 C18 H18B 109.5 C1 C18 H18C 109.5 H18A C18 H18B 109.5 H18A C18 H18C 109.5 H18B C18 H18C 109.5 C1 C19 H19A 109.5 C1 C19 H19B 109.5 C1 C19 H19C 109.5 H19A C19 H19B 109.5 H19A C19 H19C 109.5 H19B C19 H19C 109.5 N2 C20 H20A 109.5 N2 C20 H20B 109.5 N2 C20 H20C 109.5 H20A C20 H20B 109.5 H20A C20 H20C 109.5 H20B C20 H20C 109.5 H1WA O1W H1WB 109.4 loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance F1 C11 1.364(2) O1 C15 1.355(2) O1 C16 1.371(3) O2 C14 1.217(2) O3 C3 1.229(2) O4 H4 0.8400 O4 C4 1.339(2) O5 C6 1.253(2) N1 H1 0.8800 N1 C1 1.477(2) N1 C14 1.345(2) N2 C2 1.383(2) N2 C3 1.394(2) N2 C20 1.478(2) N3 C2 1.296(2) N3 C5 1.375(2) N4 H4A 0.8800 N4 C6 1.323(3) N4 C7 1.469(2) N5 N6 1.429(3) N5 C15 1.268(3) N6 C16 1.291(3) C1 C2 1.538(2) C1 C18 1.542(3) C1 C19 1.529(3) C3 C4 1.454(2) C4 C5 1.357(3) C5 C6 1.487(2) C7 H7A 0.9900 C7 H7B 0.9900 C7 C8 1.505(3) C8 C9 1.384(3) C8 C13 1.389(3) C9 H9 0.9500 C9 C10 1.389(3) C10 H10 0.9500 C10 C11 1.366(3) C11 C12 1.376(4) C12 H12 0.9500 C12 C13 1.388(4) C13 H13 0.9500 C14 C15 1.500(3) C16 C17 1.476(4) C17 H17A 0.9800 C17 H17B 0.9800 C17 H17C 0.9800 C18 H18A 0.9800 C18 H18B 0.9800 C18 H18C 0.9800 C19 H19A 0.9800 C19 H19B 0.9800 C19 H19C 0.9800 C20 H20A 0.9800 C20 H20B 0.9800 C20 H20C 0.9800 O1W H1WA 0.8500 O1W H1WB 0.8504 loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_site_symmetry_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA O4 H4 O5 . 0.84 1.88 2.593(2) 142.6 O1W H1WB O2 . 0.85 2.04 2.869(2) 164.4 C20 H20C N1 . 0.98 2.25 2.982(3) 130.4 N1 H1 O5 2_756 0.88 2.23 2.970(2) 142.2 N4 H4A O1W 2_766 0.88 2.48 3.074(3) 125.5 C7 H7A O1W 2_766 0.99 2.58 3.240(3) 124.0 C10 H10 O5 2_757 0.95 2.50 3.393(3) 157.5 C20 H20A O4 2_656 0.98 2.46 3.394(2) 159.5 C20 H20B N6 2_655 0.98 2.50 3.422(3) 157.5 O1W H1WA O4 1_565 0.85 2.51 3.249(3) 146.4 O1W H1WA O3 1_565 0.85 2.33 3.013(3) 137.7 loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion F1 C11 C12 C13 -179.7(2) O2 C14 C15 O1 19.2(3) O2 C14 C15 N5 -160.2(2) O3 C3 C4 O4 2.5(3) O3 C3 C4 C5 -176.74(17) O4 C4 C5 N3 178.19(16) O4 C4 C5 C6 0.3(3) N1 C1 C2 N2 -57.7(2) N1 C1 C2 N3 121.37(16) N1 C14 C15 O1 -161.84(18) N1 C14 C15 N5 18.8(3) N2 C3 C4 O4 -176.77(15) N2 C3 C4 C5 4.0(2) N3 C5 C6 O5 -178.36(15) N3 C5 C6 N4 1.0(2) N4 C7 C8 C9 85.1(2) N4 C7 C8 C13 -94.3(2) N5 N6 C16 O1 0.5(3) N5 N6 C16 C17 179.3(3) N6 N5 C15 O1 0.2(2) N6 N5 C15 C14 179.65(19) C1 N1 C14 O2 -2.9(3) C1 N1 C14 C15 178.28(17) C2 N2 C3 O3 177.59(16) C2 N2 C3 C4 -3.1(2) C2 N3 C5 C4 0.1(2) C2 N3 C5 C6 178.05(15) C3 N2 C2 N3 0.8(2) C3 N2 C2 C1 179.79(15) C3 C4 C5 N3 -2.7(3) C3 C4 C5 C6 179.50(15) C4 C5 C6 O5 -0.4(2) C4 C5 C6 N4 178.97(16) C5 N3 C2 N2 0.9(2) C5 N3 C2 C1 -178.19(14) C6 N4 C7 C8 -94.3(2) C7 N4 C6 O5 -3.5(3) C7 N4 C6 C5 177.18(16) C7 C8 C9 C10 -177.60(18) C7 C8 C13 C12 178.4(2) C8 C9 C10 C11 -1.1(3) C9 C8 C13 C12 -0.9(4) C9 C10 C11 F1 -179.51(18) C9 C10 C11 C12 -0.4(3) C10 C11 C12 C13 1.2(4) C11 C12 C13 C8 -0.5(4) C13 C8 C9 C10 1.8(3) C14 N1 C1 C2 172.40(17) C14 N1 C1 C18 51.1(2) C14 N1 C1 C19 -69.4(2) C15 O1 C16 N6 -0.3(3) C15 O1 C16 C17 -179.2(2) C15 N5 N6 C16 -0.4(2) C16 O1 C15 N5 0.1(2) C16 O1 C15 C14 -179.43(18) C18 C1 C2 N2 65.4(2) C18 C1 C2 N3 -115.50(17) C19 C1 C2 N2 -174.73(15) C19 C1 C2 N3 4.3(2) C20 N2 C2 N3 178.83(16) C20 N2 C2 C1 -2.2(2) C20 N2 C3 O3 -0.6(2) C20 N2 C3 C4 178.63(15) loop_ _cod_related_entry_id _cod_related_entry_database _cod_related_entry_code 1 PubChem 139086253