#------------------------------------------------------------------------------ #$Date: 2014-07-11 17:04:56 +0100 (Fri, 11 Jul 2014) $ #$Revision: 120072 $ #$URL: svn://www.crystallography.net/cod/cif/2/30/03/2300314.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2300314 loop_ _publ_author_name 'Eccles, Kevin S.' 'Stokes, Stephen P.' 'Daly, Carla A.' 'Barry, Nicola M.' 'McSweeney, Sharon P.' 'O'Neill, Damian J.' 'Kelly, Dawn M.' 'Jennings, W. Brian' 'N\'i Dhubhghaill, O. M.' 'Moynihan, Humphrey A.' 'Maguire, Anita R.' 'Lawrence, Simon E.' _publ_section_title ; Evaluation of the Bruker SMART X2S: crystallography for the nonspecialist? ; _journal_coeditor_code KK5074 _journal_issue 1 _journal_name_full 'Journal of Applied Crystallography' _journal_page_first 213 _journal_page_last 215 _journal_volume 44 _journal_year 2011 _chemical_formula_moiety 'C17 H20 Cl2 N2 Pd' _chemical_formula_sum 'C17 H20 Cl2 N2 Pd' _chemical_formula_weight 429.65 _chemical_name_systematic ; ? ; _space_group_IT_number 14 _symmetry_cell_setting monoclinic _symmetry_space_group_name_Hall '-P 2ybc' _symmetry_space_group_name_H-M 'P 1 21/c 1' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL-97 _cell_angle_alpha 90.00 _cell_angle_beta 90.470(7) _cell_angle_gamma 90.00 _cell_formula_units_Z 4 _cell_length_a 9.356(2) _cell_length_b 9.9295(19) _cell_length_c 19.357(4) _cell_measurement_reflns_used 8388 _cell_measurement_temperature 300(2) _cell_measurement_theta_max 25.15 _cell_measurement_theta_min 2.94 _cell_volume 1798.2(6) _computing_cell_refinement 'Bruker SAINT' _computing_data_collection 'Bruker GIS' _computing_data_reduction 'Bruker SAINT' _computing_molecular_graphics 'Bruker APEX2' _computing_structure_refinement 'SHELXL-97 (Sheldrick, 2008)' _computing_structure_solution 'SHELXS-97 (Sheldrick, 2008)' _diffrn_ambient_temperature 300(2) _diffrn_measured_fraction_theta_full 0.991 _diffrn_measured_fraction_theta_max 0.991 _diffrn_measurement_device_type 'Bruker SMART X2S' _diffrn_measurement_method '\w scans' _diffrn_radiation_monochromator 'doubly curved silicon crystal' _diffrn_radiation_source 'micro-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0660 _diffrn_reflns_av_sigmaI/netI 0.0457 _diffrn_reflns_limit_h_max 11 _diffrn_reflns_limit_h_min -11 _diffrn_reflns_limit_k_max 11 _diffrn_reflns_limit_k_min -11 _diffrn_reflns_limit_l_max 23 _diffrn_reflns_limit_l_min -23 _diffrn_reflns_number 16537 _diffrn_reflns_theta_full 25.23 _diffrn_reflns_theta_max 25.23 _diffrn_reflns_theta_min 2.18 _exptl_absorpt_coefficient_mu 1.326 _exptl_absorpt_correction_T_max 0.6996 _exptl_absorpt_correction_T_min 0.2196 _exptl_absorpt_correction_type multi-scan _exptl_absorpt_process_details 'SADABS V2008/1 (Bruker AXS)' _exptl_crystal_colour orange _exptl_crystal_density_diffrn 1.587 _exptl_crystal_density_method 'not measured' _exptl_crystal_description plate _exptl_crystal_F_000 864 _exptl_crystal_size_max 0.35 _exptl_crystal_size_mid 0.31 _exptl_crystal_size_min 0.29 _refine_diff_density_max 0.755 _refine_diff_density_min -1.658 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.151 _refine_ls_hydrogen_treatment constr _refine_ls_matrix_type full _refine_ls_number_parameters 200 _refine_ls_number_reflns 3229 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.151 _refine_ls_R_factor_all 0.0460 _refine_ls_R_factor_gt 0.0387 _refine_ls_shift/su_max 0.011 _refine_ls_shift/su_mean 0.002 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.0723P)^2^+0.1997P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.1073 _refine_ls_wR_factor_ref 0.1204 _reflns_number_gt 2821 _reflns_number_total 3229 _reflns_threshold_expression >2sigma(I) _[local]_cod_data_source_file kk5074.cif _[local]_cod_data_source_block Compound_3_X2S _[local]_cod_cif_authors_sg_H-M P12(1)/c1 _cod_depositor_comments ; The following automatic conversions were performed: '_symmetry_cell_setting' value 'Monoclinic' changed to 'monoclinic' according to '/home/saulius/struct/CIF-dictionaries/cif_core.dic' dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29. Automatic conversion script Id: cif_fix_enum 1555 2011-01-17 13:19:09Z saulius ; _cod_original_cell_volume 1798.2(7) _cod_database_code 2300314 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, y+1/2, -z+1/2' '-x, -y, -z' 'x, -y-1/2, z-1/2' loop_ _atom_site_type_symbol _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_disorder_assembly _atom_site_disorder_group Pd Pd1 0.34165(3) 0.36794(3) 0.474015(13) 0.03692(15) Uani d . 1 . . Cl Cl1 0.33208(12) 0.48747(11) 0.37305(5) 0.0569(3) Uani d . 1 . . Cl Cl2 0.39048(14) 0.17595(12) 0.41289(7) 0.0699(3) Uani d . 1 . . N N1 0.3512(3) 0.2777(3) 0.56775(16) 0.0421(7) Uani d . 1 . . N N2 0.2902(3) 0.5254(3) 0.53575(14) 0.0362(6) Uani d . 1 . . C C1 0.3923(5) 0.1504(4) 0.5816(3) 0.0610(12) Uani d . 1 . . H H1 0.4214 0.0950 0.5456 0.073 Uiso calc R 1 . . C C2 0.3918(6) 0.1009(5) 0.6483(3) 0.0713(14) Uani d . 1 . . H H2 0.4200 0.0126 0.6567 0.086 Uiso calc R 1 . . C C3 0.3506(5) 0.1803(5) 0.7016(2) 0.0627(12) Uani d . 1 . . H H3 0.3499 0.1471 0.7465 0.075 Uiso calc R 1 . . C C4 0.3092(4) 0.3129(5) 0.6877(2) 0.0502(9) Uani d . 1 . . H H4 0.2809 0.3697 0.7233 0.060 Uiso calc R 1 . . C C5 0.3110(4) 0.3580(3) 0.6206(2) 0.0384(8) Uani d . 1 . . C C6 0.2750(3) 0.4970(3) 0.59986(18) 0.0371(7) Uani d . 1 . . C C7 0.2723(4) 0.6643(4) 0.5106(2) 0.0444(8) Uani d . 1 . . H H7A 0.3437 0.6819 0.4757 0.053 Uiso calc R 1 . . H H7B 0.2897 0.7259 0.5487 0.053 Uiso calc R 1 . . C C8 0.1262(4) 0.6928(4) 0.4804(2) 0.0546(10) Uani d . 1 . . H H8A 0.0552 0.6929 0.5166 0.066 Uiso calc R 1 . . H H8B 0.1007 0.6238 0.4470 0.066 Uiso calc R 1 . . C C9 0.1307(5) 0.8321(5) 0.4448(3) 0.0647(12) Uani d . 1 . . H H9A 0.1660 0.8983 0.4775 0.078 Uiso calc R 1 . . H H9B 0.1973 0.8284 0.4067 0.078 Uiso calc R 1 . . C C10 -0.0122(7) 0.8767(5) 0.4179(4) 0.0789(16) Uani d . 1 . . H H10A -0.0779 0.8855 0.4561 0.095 Uiso calc R 1 . . H H10B -0.0500 0.8090 0.3866 0.095 Uiso calc R 1 . . C C11 -0.0016(8) 1.0109(6) 0.3802(4) 0.108(2) Uani d . 1 . . H H11A 0.0236 1.0804 0.4125 0.162 Uiso calc R 1 . . H H11B -0.0921 1.0318 0.3590 0.162 Uiso calc R 1 . . H H11C 0.0703 1.0050 0.3452 0.162 Uiso calc R 1 . . C C12 0.2242(4) 0.5925(4) 0.65285(18) 0.0410(8) Uani d . 1 . . C C13 0.0778(5) 0.6087(4) 0.6635(3) 0.0566(11) Uani d . 1 . . H H13 0.0124 0.5600 0.6371 0.068 Uiso calc R 1 . . C C14 0.0307(6) 0.6968(6) 0.7130(3) 0.0757(15) Uani d . 1 . . H H14 -0.0670 0.7071 0.7199 0.091 Uiso calc R 1 . . C C15 0.1245(6) 0.7695(5) 0.7522(3) 0.0753(15) Uani d . 1 . . H H15 0.0906 0.8284 0.7856 0.090 Uiso calc R 1 . . C C16 0.2708(6) 0.7556(5) 0.7423(3) 0.0741(14) Uani d . 1 . . H H16 0.3349 0.8053 0.7690 0.089 Uiso calc R 1 . . C C17 0.3202(5) 0.6678(5) 0.6928(2) 0.0594(11) Uani d . 1 . . H H17 0.4180 0.6586 0.6859 0.071 Uiso calc R 1 . . loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 Pd1 0.0399(2) 0.0360(2) 0.0348(2) 0.00347(10) -0.00391(13) -0.00320(10) Cl1 0.0754(7) 0.0628(7) 0.0324(5) 0.0177(5) -0.0037(4) 0.0013(4) Cl2 0.0953(9) 0.0484(6) 0.0663(7) 0.0068(6) 0.0090(6) -0.0190(6) N1 0.0440(16) 0.0373(17) 0.0449(17) 0.0043(13) -0.0014(13) 0.0046(14) N2 0.0374(14) 0.0363(16) 0.0346(15) 0.0036(12) -0.0098(11) 0.0014(12) C1 0.069(3) 0.045(2) 0.069(3) 0.020(2) 0.012(2) 0.013(2) C2 0.076(3) 0.058(3) 0.081(4) 0.023(2) 0.009(3) 0.031(3) C3 0.062(3) 0.071(3) 0.055(3) 0.007(2) -0.001(2) 0.030(3) C4 0.045(2) 0.064(3) 0.042(2) 0.0034(19) -0.0027(16) 0.011(2) C5 0.0338(18) 0.041(2) 0.040(2) 0.0002(13) -0.0046(14) 0.0037(14) C6 0.0349(17) 0.0372(19) 0.0389(19) 0.0013(14) -0.0088(13) -0.0023(15) C7 0.059(2) 0.0361(19) 0.038(2) 0.0048(17) -0.0084(16) -0.0021(16) C8 0.056(2) 0.050(2) 0.058(2) 0.014(2) -0.0080(18) 0.003(2) C9 0.068(3) 0.057(3) 0.069(3) 0.008(2) -0.018(2) 0.000(2) C10 0.080(4) 0.068(4) 0.088(4) 0.013(2) -0.027(3) 0.000(3) C11 0.136(6) 0.067(4) 0.120(6) 0.013(4) -0.052(5) 0.021(4) C12 0.048(2) 0.0407(19) 0.0342(18) 0.0035(16) -0.0037(15) -0.0009(16) C13 0.051(2) 0.059(3) 0.059(3) -0.0021(19) 0.004(2) -0.007(2) C14 0.074(3) 0.073(3) 0.081(4) 0.015(3) 0.028(3) -0.011(3) C15 0.107(4) 0.065(3) 0.054(3) 0.022(3) 0.018(3) -0.014(2) C16 0.099(4) 0.070(3) 0.054(3) 0.002(3) -0.008(3) -0.022(2) C17 0.055(2) 0.073(3) 0.050(3) 0.003(2) -0.0095(19) -0.019(2) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Cl Cl 0.1484 0.1585 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Pd Pd -0.9988 1.0072 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle_site_symmetry_1 _geom_angle_site_symmetry_3 _geom_angle _geom_angle_publ_flag N1 Pd1 N2 . . 79.76(12) ? N1 Pd1 Cl1 . . 175.01(9) ? N2 Pd1 Cl1 . . 95.49(8) ? N1 Pd1 Cl2 . . 94.99(9) ? N2 Pd1 Cl2 . . 174.12(9) ? Cl1 Pd1 Cl2 . . 89.83(4) ? C1 N1 C5 . . 118.9(4) ? C1 N1 Pd1 . . 127.1(3) ? C5 N1 Pd1 . . 114.0(2) ? C6 N2 C7 . . 120.9(3) ? C6 N2 Pd1 . . 115.4(2) ? C7 N2 Pd1 . . 123.7(2) ? N1 C1 C2 . . 121.1(4) ? N1 C1 H1 . . 119.4 ? C2 C1 H1 . . 119.4 ? C3 C2 C1 . . 120.5(4) ? C3 C2 H2 . . 119.8 ? C1 C2 H2 . . 119.8 ? C2 C3 C4 . . 118.7(4) ? C2 C3 H3 . . 120.6 ? C4 C3 H3 . . 120.6 ? C5 C4 C3 . . 118.9(4) ? C5 C4 H4 . . 120.6 ? C3 C4 H4 . . 120.6 ? N1 C5 C4 . . 121.9(3) ? N1 C5 C6 . . 114.2(3) ? C4 C5 C6 . . 123.9(4) ? N2 C6 C5 . . 116.3(3) ? N2 C6 C12 . . 124.7(3) ? C5 C6 C12 . . 119.0(3) ? N2 C7 C8 . . 113.8(3) ? N2 C7 H7A . . 108.8 ? C8 C7 H7A . . 108.8 ? N2 C7 H7B . . 108.8 ? C8 C7 H7B . . 108.8 ? H7A C7 H7B . . 107.7 ? C7 C8 C9 . . 108.2(4) ? C7 C8 H8A . . 110.1 ? C9 C8 H8A . . 110.1 ? C7 C8 H8B . . 110.1 ? C9 C8 H8B . . 110.1 ? H8A C8 H8B . . 108.4 ? C10 C9 C8 . . 113.1(4) ? C10 C9 H9A . . 109.0 ? C8 C9 H9A . . 109.0 ? C10 C9 H9B . . 109.0 ? C8 C9 H9B . . 109.0 ? H9A C9 H9B . . 107.8 ? C9 C10 C11 . . 111.3(5) ? C9 C10 H10A . . 109.4 ? C11 C10 H10A . . 109.4 ? C9 C10 H10B . . 109.4 ? C11 C10 H10B . . 109.4 ? H10A C10 H10B . . 108.0 ? C10 C11 H11A . . 109.5 ? C10 C11 H11B . . 109.5 ? H11A C11 H11B . . 109.5 ? C10 C11 H11C . . 109.5 ? H11A C11 H11C . . 109.5 ? H11B C11 H11C . . 109.5 ? C13 C12 C17 . . 119.0(4) ? C13 C12 C6 . . 119.9(3) ? C17 C12 C6 . . 121.2(3) ? C14 C13 C12 . . 119.8(4) ? C14 C13 H13 . . 120.1 ? C12 C13 H13 . . 120.1 ? C15 C14 C13 . . 121.1(5) ? C15 C14 H14 . . 119.4 ? C13 C14 H14 . . 119.5 ? C14 C15 C16 . . 120.1(4) ? C14 C15 H15 . . 119.9 ? C16 C15 H15 . . 119.9 ? C17 C16 C15 . . 119.6(5) ? C17 C16 H16 . . 120.2 ? C15 C16 H16 . . 120.2 ? C16 C17 C12 . . 120.3(4) ? C16 C17 H17 . . 119.8 ? C12 C17 H17 . . 119.8 ? loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_site_symmetry_2 _geom_bond_distance _geom_bond_publ_flag Pd1 N1 . 2.025(3) ? Pd1 N2 . 2.028(3) ? Pd1 Cl1 . 2.2876(11) ? Pd1 Cl2 . 2.2917(12) ? N1 C1 . 1.347(5) ? N1 C5 . 1.353(5) ? N2 C6 . 1.282(5) ? N2 C7 . 1.472(5) ? C1 C2 . 1.382(7) ? C1 H1 . 0.9300 ? C2 C3 . 1.358(8) ? C2 H2 . 0.9300 ? C3 C4 . 1.398(7) ? C3 H3 . 0.9300 ? C4 C5 . 1.374(5) ? C4 H4 . 0.9300 ? C5 C6 . 1.475(5) ? C6 C12 . 1.479(5) ? C7 C8 . 1.510(5) ? C7 H7A . 0.9700 ? C7 H7B . 0.9700 ? C8 C9 . 1.546(6) ? C8 H8A . 0.9700 ? C8 H8B . 0.9700 ? C9 C10 . 1.497(7) ? C9 H9A . 0.9700 ? C9 H9B . 0.9700 ? C10 C11 . 1.523(8) ? C10 H10A . 0.9700 ? C10 H10B . 0.9700 ? C11 H11A . 0.9600 ? C11 H11B . 0.9600 ? C11 H11C . 0.9600 ? C12 C13 . 1.395(6) ? C12 C17 . 1.397(6) ? C13 C14 . 1.373(7) ? C13 H13 . 0.9300 ? C14 C15 . 1.362(8) ? C14 H14 . 0.9300 ? C15 C16 . 1.390(7) ? C15 H15 . 0.9300 ? C16 C17 . 1.380(6) ? C16 H16 . 0.9300 ? C17 H17 . 0.9300 ? _journal_paper_doi 10.1107/S0021889810042561