#------------------------------------------------------------------------------ #$Date: 2014-07-11 19:33:45 +0100 (Fri, 11 Jul 2014) $ #$Revision: 120075 $ #$URL: svn://www.crystallography.net/cod/cif/4/07/55/4075548.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/ # # All data on this site have been placed in the public domain by the # contributors. # data_4075548 loop_ _publ_author_name 'Mandal, Debaprasad' 'Gupta, B. D.' _publ_section_title ; Hindered Rotation Leading to Nonequivalence in Cobaloximes ; _journal_issue 14 _journal_name_full Organometallics _journal_page_first 3305 _journal_volume 25 _journal_year 2006 _chemical_formula_moiety 'C21 H28 Co N5 O4' _chemical_formula_sum 'C21 H28 Co N5 O4' _chemical_formula_weight 473.41 _chemical_name_common (2-Me)C6H4CH2Co(dmgH)2Py _chemical_name_systematic ; trans-bis(dimethylglyoximato)-ortho-methyl-benzyl-(pyridine)-cobalt(III) ; _space_group_IT_number 2 _symmetry_cell_setting triclinic _symmetry_Int_Tables_number 2 _symmetry_space_group_name_Hall '-P 1' _symmetry_space_group_name_H-M 'P -1' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL-97 _cell_angle_alpha 77.278(5) _cell_angle_beta 76.152(5) _cell_angle_gamma 70.892(5) _cell_formula_units_Z 2 _cell_length_a 8.147(5) _cell_length_b 10.658(5) _cell_length_c 13.759(5) _cell_measurement_reflns_used 25 _cell_measurement_temperature 293(2) _cell_measurement_theta_max 25.0 _cell_measurement_theta_min 1.0 _cell_volume 1082.9(9) _computing_cell_refinement 'CAD4 Express (Enraf Nonius, 1994)' _computing_data_collection 'CAD4 Express (Enraf Nonius, 1994)' _computing_data_reduction 'XCAD4 (Harms & Wocadlo, 1995)' _computing_molecular_graphics 'Ortep-3 for Windows (Farrugia, 1997)' _computing_publication_material 'WinGX publication routines (Farrugia, 1999)' _computing_structure_refinement 'SHELXL-97 (Sheldrick, 1997)' _computing_structure_solution 'SHELXS-97 (Sheldrick, 1997)' _diffrn_ambient_temperature 293(2) _diffrn_measured_fraction_theta_full 0.576 _diffrn_measured_fraction_theta_max 0.576 _diffrn_measurement_device_type 'Enraf-Nonius CAD4 Mach2' _diffrn_measurement_method 'theta-2theta scan' _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0579 _diffrn_reflns_av_sigmaI/netI 0.0977 _diffrn_reflns_limit_h_max 8 _diffrn_reflns_limit_h_min 0 _diffrn_reflns_limit_k_max 11 _diffrn_reflns_limit_k_min -11 _diffrn_reflns_limit_l_max 14 _diffrn_reflns_limit_l_min -14 _diffrn_reflns_number 2367 _diffrn_reflns_theta_full 24.98 _diffrn_reflns_theta_max 24.98 _diffrn_reflns_theta_min 2.05 _diffrn_standards_decay_% <0.05 _diffrn_standards_interval_time 1h _diffrn_standards_number 3 _exptl_absorpt_coefficient_mu 0.831 _exptl_absorpt_correction_T_max 0.8649 _exptl_absorpt_correction_T_min 0.8068 _exptl_absorpt_correction_type empirical _exptl_absorpt_process_details XCAD4 _exptl_crystal_colour orange _exptl_crystal_density_diffrn 1.452 _exptl_crystal_density_method 'not measured' _exptl_crystal_description block _exptl_crystal_F_000 496 _exptl_crystal_size_max 0.27 _exptl_crystal_size_mid 0.22 _exptl_crystal_size_min 0.18 _refine_diff_density_max 0.396 _refine_diff_density_min -0.446 _refine_diff_density_rms 0.069 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 0.933 _refine_ls_hydrogen_treatment mixed _refine_ls_matrix_type full _refine_ls_number_parameters 285 _refine_ls_number_reflns 2194 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 0.933 _refine_ls_R_factor_all 0.1033 _refine_ls_R_factor_gt 0.0547 _refine_ls_shift/su_max 0.002 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.0786P)^2^+0.0000P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.1224 _refine_ls_wR_factor_ref 0.1361 _reflns_number_gt 1381 _reflns_number_total 2194 _reflns_threshold_expression >2sigma(I) _[local]_cod_data_source_file om060357xsi20060424_045012.cif _[local]_cod_data_source_block omebn _cod_database_code 4075548 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, -y, -z' loop_ _atom_site_label _atom_site_type_symbol _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_occupancy _atom_site_symmetry_multiplicity _atom_site_calc_flag _atom_site_refinement_flags Co1 Co 0.55619(11) 0.19137(11) 0.23513(9) 0.0293(4) Uani 1 1 d . N1 N 0.4446(7) 0.1460(7) 0.1489(6) 0.035(2) Uani 1 1 d . N2 N 0.3954(6) 0.1205(7) 0.3346(5) 0.026(2) Uani 1 1 d . N3 N 0.6645(7) 0.2383(7) 0.3229(5) 0.030(2) Uani 1 1 d . N4 N 0.7131(7) 0.2683(7) 0.1358(5) 0.041(3) Uani 1 1 d . N5 N 0.7381(6) 0.0040(7) 0.2380(5) 0.033(2) Uani 1 1 d . O1 O 0.4864(7) 0.1707(6) 0.0482(4) 0.056(2) Uani 1 1 d . H1 H 0.5197 0.2767 0.0184 0.083 Uiso 1 1 d . O2 O 0.3829(6) 0.1141(7) 0.4340(5) 0.051(2) Uani 1 1 d . O3 O 0.6238(6) 0.2140(6) 0.4235(5) 0.050(2) Uani 1 1 d . H3 H 0.5885 0.1270 0.4455 0.075 Uiso 1 1 d . O4 O 0.7212(6) 0.2779(6) 0.0369(4) 0.051(2) Uani 1 1 d . C1 C 0.2321(10) 0.0349(9) 0.1345(8) 0.065(4) Uani 1 1 d . H1A H 0.2804 0.0496 0.0635 0.098 Uiso 1 1 calc R H1B H 0.1088 0.0834 0.1458 0.098 Uiso 1 1 calc R H1C H 0.2465 -0.0593 0.1569 0.098 Uiso 1 1 calc R C2 C 0.3283(9) 0.0842(9) 0.1935(7) 0.040(3) Uani 1 1 d . C3 C 0.2960(8) 0.0668(9) 0.3022(7) 0.042(3) Uani 1 1 d . C4 C 0.1678(9) 0.0020(9) 0.3721(8) 0.053(3) Uani 1 1 d . H4A H 0.1997 -0.0250 0.4380 0.080 Uiso 1 1 calc R H4B H 0.1691 -0.0755 0.3469 0.080 Uiso 1 1 calc R H4C H 0.0516 0.0645 0.3767 0.080 Uiso 1 1 calc R C5 C 0.8755(9) 0.3516(9) 0.3352(7) 0.056(3) Uani 1 1 d . H5A H 0.8150 0.4446 0.3396 0.084 Uiso 1 1 calc R H5B H 0.9951 0.3425 0.3008 0.084 Uiso 1 1 calc R H5C H 0.8751 0.3008 0.4021 0.084 Uiso 1 1 calc R C6 C 0.7836(8) 0.2997(8) 0.2775(7) 0.038(3) Uani 1 1 d . C7 C 0.8136(9) 0.3156(9) 0.1715(8) 0.042(3) Uani 1 1 d . C8 C 0.9363(10) 0.3870(10) 0.1015(9) 0.071(4) Uani 1 1 d . H8A H 0.9181 0.3982 0.0333 0.107 Uiso 1 1 calc R H8B H 1.0561 0.3352 0.1058 0.107 Uiso 1 1 calc R H8C H 0.9137 0.4735 0.1202 0.107 Uiso 1 1 calc R C9 C 0.7720(9) -0.0739(9) 0.3264(8) 0.041(3) Uani 1 1 d . H9 H 0.7118 -0.0429 0.3870 0.049 Uiso 1 1 calc R C10 C 0.8936(10) -0.1979(9) 0.3286(8) 0.056(3) Uani 1 1 d . H10 H 0.9176 -0.2488 0.3905 0.067 Uiso 1 1 calc R C11 C 0.9791(11) -0.2475(11) 0.2424(10) 0.067(4) Uani 1 1 d . H11 H 1.0603 -0.3325 0.2442 0.080 Uiso 1 1 calc R C12 C 0.9441(11) -0.1702(11) 0.1522(9) 0.066(4) Uani 1 1 d . H12 H 1.0011 -0.2009 0.0911 0.079 Uiso 1 1 calc R C13 C 0.8222(8) -0.0459(9) 0.1545(7) 0.044(3) Uani 1 1 d . H13 H 0.7975 0.0062 0.0930 0.053 Uiso 1 1 calc R C14 C 0.3709(8) 0.3756(7) 0.2238(7) 0.035(3) Uani 1 1 d . H14A H 0.3487 0.3993 0.1550 0.042 Uiso 1 1 calc R H14B H 0.2618 0.3661 0.2679 0.042 Uiso 1 1 calc R C15 C 0.4107(9) 0.4906(9) 0.2487(8) 0.040(3) Uani 1 1 d . C16 C 0.4982(10) 0.5676(9) 0.1723(8) 0.052(3) Uani 1 1 d . H16 H 0.5258 0.5468 0.1070 0.063 Uiso 1 1 calc R C17 C 0.5467(10) 0.6743(10) 0.1881(10) 0.075(5) Uani 1 1 d . H17 H 0.6040 0.7253 0.1357 0.090 Uiso 1 1 calc R C18 C 0.5040(11) 0.6996(11) 0.2870(10) 0.065(4) Uani 1 1 d . H18 H 0.5383 0.7676 0.3016 0.078 Uiso 1 1 calc R C19 C 0.4137(11) 0.6290(9) 0.3642(9) 0.061(4) Uani 1 1 d . H19 H 0.3852 0.6500 0.4294 0.073 Uiso 1 1 calc R C20 C 0.3644(9) 0.5241(9) 0.3435(8) 0.049(4) Uani 1 1 d . C21 C 0.2575(11) 0.4554(9) 0.4296(8) 0.065(3) Uani 1 1 d . H21A H 0.1341 0.4981 0.4288 0.098 Uiso 1 1 calc R H21B H 0.2838 0.4616 0.4925 0.098 Uiso 1 1 calc R H21C H 0.2860 0.3626 0.4228 0.098 Uiso 1 1 calc R loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_23 _atom_site_aniso_U_13 _atom_site_aniso_U_12 Co1 0.0248(5) 0.0321(6) 0.0356(7) -0.0075(7) -0.0046(4) -0.0134(4) N1 0.034(3) 0.041(5) 0.037(5) -0.017(5) -0.002(3) -0.017(3) N2 0.023(3) 0.021(5) 0.028(5) 0.013(5) -0.005(3) -0.012(3) N3 0.026(3) 0.031(4) 0.037(5) -0.008(5) -0.002(3) -0.014(3) N4 0.037(3) 0.047(6) 0.041(6) -0.015(6) 0.005(4) -0.017(4) N5 0.024(3) 0.038(5) 0.042(5) -0.013(5) 0.007(3) -0.019(3) O1 0.072(4) 0.067(5) 0.040(4) -0.019(5) -0.009(3) -0.031(4) O2 0.042(3) 0.068(6) 0.048(5) -0.016(6) 0.002(3) -0.025(3) O3 0.045(3) 0.063(5) 0.054(5) -0.022(5) -0.012(3) -0.021(3) O4 0.060(3) 0.062(6) 0.031(4) -0.003(5) 0.005(3) -0.029(4) C1 0.060(5) 0.053(7) 0.104(10) -0.029(8) -0.034(6) -0.020(5) C2 0.038(4) 0.034(6) 0.052(7) -0.009(7) -0.013(5) -0.012(4) C3 0.024(4) 0.038(6) 0.064(8) -0.017(7) 0.001(4) -0.011(4) C4 0.034(4) 0.050(6) 0.078(9) 0.002(8) -0.003(5) -0.027(4) C5 0.040(4) 0.067(7) 0.080(8) -0.030(8) -0.012(5) -0.029(5) C6 0.021(4) 0.040(6) 0.058(7) -0.023(7) -0.004(4) -0.009(4) C7 0.031(4) 0.037(6) 0.060(8) -0.013(7) 0.007(4) -0.021(4) C8 0.052(5) 0.069(8) 0.095(10) -0.022(9) 0.024(6) -0.042(5) C9 0.031(4) 0.034(7) 0.057(8) -0.001(8) -0.008(5) -0.012(4) C10 0.055(5) 0.036(7) 0.071(9) 0.013(8) -0.019(6) -0.014(5) C11 0.038(5) 0.041(8) 0.121(12) -0.031(10) -0.017(6) 0.000(5) C12 0.045(5) 0.064(9) 0.094(10) -0.042(10) 0.004(6) -0.015(5) C13 0.031(4) 0.050(6) 0.056(7) -0.026(7) 0.007(4) -0.017(4) C14 0.030(4) 0.035(5) 0.041(6) 0.001(6) -0.007(4) -0.014(4) C15 0.030(4) 0.035(6) 0.059(8) -0.017(7) -0.004(5) -0.012(4) C16 0.047(5) 0.043(6) 0.074(9) -0.012(8) -0.017(6) -0.015(5) C17 0.045(5) 0.050(8) 0.139(14) -0.030(11) -0.017(7) -0.017(5) C18 0.052(5) 0.053(7) 0.103(10) -0.036(9) -0.023(6) -0.009(5) C19 0.053(5) 0.052(7) 0.083(10) -0.029(9) -0.010(6) -0.012(5) C20 0.036(4) 0.045(7) 0.069(9) -0.028(8) 0.003(5) -0.013(4) C21 0.069(6) 0.056(7) 0.068(8) -0.022(8) 0.008(6) -0.020(5) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Co Co 0.3494 0.9721 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_publ_flag N2 Co1 N1 82.0(3) ? N2 Co1 N4 178.1(3) ? N1 Co1 N4 98.4(3) ? N2 Co1 N3 97.4(3) ? N1 Co1 N3 179.1(3) ? N4 Co1 N3 82.2(3) ? N2 Co1 C14 90.2(3) ? N1 Co1 C14 86.6(3) ? N4 Co1 C14 88.0(3) ? N3 Co1 C14 92.7(2) ? N2 Co1 N5 90.4(3) ? N1 Co1 N5 89.7(2) ? N4 Co1 N5 91.5(3) ? N3 Co1 N5 91.0(2) ? C14 Co1 N5 176.1(3) yes C2 N1 O1 121.6(6) ? C2 N1 Co1 115.5(6) ? O1 N1 Co1 122.9(5) ? C3 N2 O2 119.4(8) ? C3 N2 Co1 116.3(6) ? O2 N2 Co1 124.1(4) ? C6 N3 O3 121.3(5) ? C6 N3 Co1 114.8(5) ? O3 N3 Co1 123.9(5) ? C7 N4 O4 121.8(8) ? C7 N4 Co1 114.7(6) ? O4 N4 Co1 123.4(4) ? C13 N5 C9 117.3(7) ? C13 N5 Co1 121.8(7) ? C9 N5 Co1 120.9(5) ? N1 C2 C3 115.0(6) ? N1 C2 C1 122.0(8) ? C3 C2 C1 123.0(8) ? N2 C3 C2 110.9(8) ? N2 C3 C4 122.6(8) ? C2 C3 C4 126.5(6) ? N3 C6 C7 114.4(6) ? N3 C6 C5 122.1(7) ? C7 C6 C5 123.5(8) ? N4 C7 C6 113.9(8) ? N4 C7 C8 120.6(9) ? C6 C7 C8 125.4(7) ? N5 C9 C10 121.1(8) ? C11 C10 C9 120.9(11) ? C10 C11 C12 118.6(9) ? C11 C12 C13 118.0(9) ? N5 C13 C12 124.1(10) ? C15 C14 Co1 118.1(4) ? C20 C15 C16 118.2(7) ? C20 C15 C14 122.7(10) ? C16 C15 C14 119.1(7) ? C15 C16 C17 123.6(9) ? C18 C17 C16 115.7(12) ? C19 C18 C17 122.8(8) ? C18 C19 C20 119.2(9) ? C15 C20 C19 120.5(11) ? C15 C20 C21 122.8(7) ? C19 C20 C21 116.7(8) ? loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance _geom_bond_publ_flag Co1 N2 1.870(7) ? Co1 N1 1.876(5) ? Co1 N4 1.879(7) ? Co1 N3 1.884(5) ? Co1 C14 2.048(7) yes Co1 N5 2.060(7) yes N1 C2 1.289(11) ? N1 O1 1.333(10) ? N2 C3 1.331(7) ? N2 O2 1.335(9) ? N3 C6 1.306(10) ? N3 O3 1.332(9) ? N4 C7 1.318(8) ? N4 O4 1.328(9) ? N5 C13 1.314(8) ? N5 C9 1.346(12) ? C1 C2 1.520(8) ? C2 C3 1.435(13) ? C3 C4 1.481(12) ? C5 C6 1.498(8) ? C6 C7 1.400(14) ? C7 C8 1.490(13) ? C9 C10 1.367(11) ? C10 C11 1.345(12) ? C11 C12 1.366(16) ? C12 C13 1.373(12) ? C14 C15 1.491(8) ? C15 C20 1.362(11) ? C15 C16 1.390(14) ? C16 C17 1.394(10) ? C17 C18 1.385(14) ? C18 C19 1.368(15) ? C19 C20 1.407(10) ? C20 C21 1.497(13) ? loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion N2 Co1 N1 C2 -4.3(5) N4 Co1 N1 C2 177.6(6) N3 Co1 N1 C2 -53(25) C14 Co1 N1 C2 -95.0(6) N5 Co1 N1 C2 86.1(6) N2 Co1 N1 O1 178.2(6) N4 Co1 N1 O1 0.1(6) N3 Co1 N1 O1 130(24) C14 Co1 N1 O1 87.5(6) N5 Co1 N1 O1 -91.3(6) N1 Co1 N2 C3 4.6(5) N4 Co1 N2 C3 107(8) N3 Co1 N2 C3 -176.1(5) C14 Co1 N2 C3 91.1(6) N5 Co1 N2 C3 -85.1(5) N1 Co1 N2 O2 -179.5(6) N4 Co1 N2 O2 -77(9) N3 Co1 N2 O2 -0.2(6) C14 Co1 N2 O2 -92.9(6) N5 Co1 N2 O2 90.9(6) N2 Co1 N3 C6 -176.6(5) N1 Co1 N3 C6 -128(24) N4 Co1 N3 C6 1.6(5) C14 Co1 N3 C6 -86.0(5) N5 Co1 N3 C6 92.9(5) N2 Co1 N3 O3 2.4(6) N1 Co1 N3 O3 50(25) N4 Co1 N3 O3 -179.5(6) C14 Co1 N3 O3 92.9(6) N5 Co1 N3 O3 -88.1(6) N2 Co1 N4 C7 76(9) N1 Co1 N4 C7 178.6(6) N3 Co1 N4 C7 -0.7(5) C14 Co1 N4 C7 92.3(6) N5 Co1 N4 C7 -91.5(6) N2 Co1 N4 O4 -102(8) N1 Co1 N4 O4 0.0(7) N3 Co1 N4 O4 -179.2(7) C14 Co1 N4 O4 -86.2(6) N5 Co1 N4 O4 90.0(6) N2 Co1 N5 C13 131.6(5) N1 Co1 N5 C13 49.6(6) N4 Co1 N5 C13 -48.8(5) N3 Co1 N5 C13 -131.0(5) C14 Co1 N5 C13 33(5) N2 Co1 N5 C9 -46.6(6) N1 Co1 N5 C9 -128.6(6) N4 Co1 N5 C9 133.0(6) N3 Co1 N5 C9 50.8(6) C14 Co1 N5 C9 -145(4) O1 N1 C2 C3 -179.2(7) Co1 N1 C2 C3 3.3(9) O1 N1 C2 C1 0.3(11) Co1 N1 C2 C1 -177.2(5) O2 N2 C3 C2 179.9(7) Co1 N2 C3 C2 -3.9(9) O2 N2 C3 C4 1.3(11) Co1 N2 C3 C4 177.5(6) N1 C2 C3 N2 0.4(11) C1 C2 C3 N2 -179.1(6) N1 C2 C3 C4 178.9(7) C1 C2 C3 C4 -0.6(13) O3 N3 C6 C7 178.9(7) Co1 N3 C6 C7 -2.1(9) O3 N3 C6 C5 -2.7(11) Co1 N3 C6 C5 176.3(5) O4 N4 C7 C6 178.4(7) Co1 N4 C7 C6 -0.2(9) O4 N4 C7 C8 2.4(11) Co1 N4 C7 C8 -176.2(6) N3 C6 C7 N4 1.5(11) C5 C6 C7 N4 -176.9(7) N3 C6 C7 C8 177.2(7) C5 C6 C7 C8 -1.1(13) C13 N5 C9 C10 2.2(10) Co1 N5 C9 C10 -179.5(5) N5 C9 C10 C11 -2.0(12) C9 C10 C11 C12 1.1(13) C10 C11 C12 C13 -0.4(14) C9 N5 C13 C12 -1.5(10) Co1 N5 C13 C12 -179.8(5) C11 C12 C13 N5 0.6(13) N2 Co1 C14 C15 118.5(7) N1 Co1 C14 C15 -159.6(7) N4 Co1 C14 C15 -61.0(7) N3 Co1 C14 C15 21.1(7) N5 Co1 C14 C15 -143(4) Co1 C14 C15 C20 -90.9(8) Co1 C14 C15 C16 89.2(9) C20 C15 C16 C17 2.3(12) C14 C15 C16 C17 -177.8(7) C15 C16 C17 C18 0.8(12) C16 C17 C18 C19 -2.6(13) C17 C18 C19 C20 1.3(14) C16 C15 C20 C19 -3.7(11) C14 C15 C20 C19 176.5(7) C16 C15 C20 C21 175.0(8) C14 C15 C20 C21 -4.8(12) C18 C19 C20 C15 2.0(12) C18 C19 C20 C21 -176.8(9) _journal_paper_doi 10.1021/om060357x