#------------------------------------------------------------------------------ #$Date: 2016-03-22 10:06:16 +0000 (Tue, 22 Mar 2016) $ #$Revision: 178934 $ #$URL: svn://www.crystallography.net/cod/cif/4/11/63/4116349.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/ # # All data on this site have been placed in the public domain by the # contributors. # data_4116349 loop_ _publ_author_name 'Larry R. Falvello' 'Michael A. Hitchman' 'Fernando Palacio' 'Isabel Pascual' 'Arthur J. Schultz' 'Horst Stratemeier' 'Milagros Tom\'as' 'Esteban P. Urriolabeitia' 'Dianna M. Young' _publ_section_title ; Tunable Molecular Distortion in a Nickel Complex Coupled to a Reversible Phase Transition in the Crystalline State ; _journal_name_full 'Journal of the American Chemical Society' _journal_page_first 2808 _journal_page_last 2819 _journal_paper_doi 10.1021/ja983247t _journal_volume 121 _journal_year 1999 _chemical_formula_sum 'C6 H16 N10 Ni O6' _chemical_formula_weight 383.00 _chemical_name_systematic ; ? ; _space_group_IT_number 63 _symmetry_cell_setting orthorhombic _symmetry_space_group_name_Hall '-C 2c 2' _symmetry_space_group_name_H-M 'C m c m' _atom_sites_solution_hydrogens difmap _audit_creation_method EDT _cell_angle_alpha 90.00 _cell_angle_beta 90.00 _cell_angle_gamma 90.00 _cell_formula_units_Z 4 _cell_length_a 12.0323(15) _cell_length_b 7.2266(12) _cell_length_c 15.661(6) _cell_measurement_temperature 13(3) _cell_volume 1361.8(6) _computing_data_collection SCD _computing_data_reduction ANVRED,INTEGRATE _computing_molecular_graphics 'SHELXTL Rel. 5.05/VMS (Siemens)' _computing_publication_material EDT _computing_structure_refinement 'GSAS (Larson and Von Dreele)' _computing_structure_solution 'From known coordinates' _diffrn_ambient_temperature 13(3) _diffrn_measurement_device_type ; Single Crystal Diffractometer Time-of-flight instrument using multiple wavelengths ; _diffrn_measurement_method 'three-dimensional histograms' _diffrn_radiation_probe neutron _diffrn_radiation_source ; Intense Pulsed Neutron Source Argonne National Laboratory ; _diffrn_radiation_type neutron _diffrn_reflns_number 1164 _exptl_crystal_colour purple _exptl_crystal_description 'large block' _refine_ls_extinction_coef 8.267E-06(3.763E-07) _refine_ls_extinction_method 'Type I' _refine_ls_hydrogen_treatment refall _refine_ls_matrix_type full _refine_ls_number_reflns 1164 _refine_ls_R_factor_gt 0.069 _refine_ls_structure_factor_coef F _refine_ls_weighting_scheme ; sigmaFoSq = SigmaFoSq + (0.002*FoSq)^2 Wght = (2*Fo/sigmaFoSq)**2 Weights are scaled by Min(Fo/Fc,Fc/Fo)**4 ; _refine_ls_wR_factor_gt 0.045 _reflns_threshold_expression >3sigma(F**2) _cod_data_source_file ja983247t_9.cif _cod_data_source_block 5 _cod_database_code 4116349 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, -y, z+1/2' '-x, y, -z+1/2' 'x, -y, -z' 'x+1/2, y+1/2, z' '-x+1/2, -y+1/2, z+1/2' '-x+1/2, y+1/2, -z+1/2' 'x+1/2, -y+1/2, -z' '-x, -y, -z' 'x, y, -z-1/2' 'x, -y, z-1/2' '-x, y, z' '-x+1/2, -y+1/2, -z' 'x+1/2, y+1/2, -z-1/2' 'x+1/2, -y+1/2, z-1/2' '-x+1/2, y+1/2, z' loop_ _atom_site_label _atom_site_type_symbol _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_occupancy _atom_site_calc_flag _atom_site_refinement_flags Ni1 Ni .500000 .15800(25) .750000 .0049 Uani 0.25 d S N1 N .500000 .16659(20) .60596(17) .0056 Uani 0.50 d S C2 C .40225(12) .19482(18) .56316(16) .0041 Uani 1.00 d . O2 O .30967(14) .16703(22) .59671(20) .0070 Uani 1.00 d . N3 N .40425(10) .25828(15) .47976(13) .0062 Uani 1.00 d . C4 C .500000 .29484(27) .43568(25) .0043 Uani 0.50 d S O4 O .500000 .35402(35) .36216(29) .0089 Uani 0.50 d S N4 N .61782(14) .36988(24) .750000 .0074 Uani 0.50 d S N5 N .62129(16) -.04610(22) .750000 .0067 Uani 0.50 d S H3 H .32933(28) .2817(4) .45197(34) .0168 Uani 1.00 d . H41 H .60849(40) .4538(6) .80046(46) .0376 Uani 1.00 d . H42 H .69238(43) .3196(8) .750000 .0471 Uani 0.50 d S H51 H .66905(35) -.0241(6) .69721(46) .0313 Uani 1.00 d . H52 H .59202(47) -.1762(7) .750000 .0437 Uani 0.50 d S loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 Ni1 .0021(9) .0042(10) .0083(26) .0000 .0000 .0000 N1 .0019(7) .0080(8) .0068(20) .0000 .0000 .0016(7) C2 .0027(7) .0066(8) .0030(22) -.0001(5) .0016(9) .0014(6) O2 .0033(8) .0123(9) .0054(25) .0005(7) -.0006(10) .0009(8) N3 .0049(5) .0083(6) .0053(15) -.0001(4) .0012(7) -.0003(5) C4 .0037(10) .0048(11) .0044(33) .0000 .0000 .0018(9) O4 .0103(13) .0095(14) .0071(36) .0000 .0000 .0032(13) N4 .0047(9) .0087(9) .0088(27) -.0013(6) .0000 .0000 N5 .0051(9) .0094(9) .0055(23) .0025(6) .0000 .0000 H3 .0111(17) .0207(17) .019(5) .0003(11) -.0003(18) -.0022(14) H41 .0488(24) .0337(24) .030(6) -.0155(19) .0026(30) -.0126(23) H42 .0124(26) .0300(31) .099(11) .0044(22) .0000 .0000 H51 .0242(21) .0510(26) .019(6) .0070(17) .0055(28) .0011(22) H52 .0282(28) .0159(26) .087(10) -.0010(22) .0000 .0000 loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0000 0.0000 'International Tables Vol C Tables 4.4.4.1' H H 0.0000 0.0000 'International Tables Vol C Tables 4.4.4.1' N N 0.0000 0.0000 'International Tables Vol C Tables 4.4.4.1' O O 0.0000 0.0000 'International Tables Vol C Tables 4.4.4.1' Ni Ni 0.0000 0.0000 'International Tables Vol C Tables 4.4.4.1' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_site_symmetry_3 N(1) Ni(1) N(4) 88.84(4) . N(1) Ni(1) N(5) 91.12(4) . N(4) Ni(1) N(4) 85.59(12) 12_655 N(4) Ni(1) N(5) 92.51(7) . N(4) Ni(1) N(5) 178.10(10) 12_655 N(5) Ni(1) N(5) 89.39(13) 12_655 Ni(1) N(1) C(2) 119.57(13) . C(2) N(1) C(2) 118.43(26) 12_655 N(1) C(2) O(2) 122.46(24) . N(1) C(2) N(3) 119.76(17) . O(2) C(2) N(3) 117.78(19) . C(2) N(3) C(4) 123.66(18) . C(2) N(3) H(3) 116.38(31) . C(4) N(3) H(3) 119.93(34) . N(3) C(4) N(3) 114.63(29) 12_655 Ni(1) N(4) H(4) 111.6(6) . H(4) N(4) H(4) 104.0(7) 10_557 Ni(1) N(5) H(5) 114.8(4) . Ni(1) N(5) H(5B) 106.58(25) . H(5) N(5) H(5B) 110.13(32) . H(5B) N(5) H(5B) 108.4(6) 10_557 loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance _geom_bond_site_symmetry_2 _geom_bond_publ_flag Ni(1) N(1) 2.2566(28) . ? Ni(1) N(4) 2.0867(21) . ? Ni(1) N(5) 2.0749(21) . ? N(1) C(2) 1.3690(22) . ? C(2) O(2) 1.2479(26) . ? C(2) N(3) 1.3845(29) . ? N(3) C(4) 1.3689(23) . ? N(3) H(3) 1.015(4) . ? C(4)_O(4) 1.228(5) . ? N(4)_H(4) 1.003(6) . ? N(4)_H(4B) .968(6) . ? N(5)_H(5) 1.004(6) . ? N(5)_H(5B) 1.019(7) . ?