#------------------------------------------------------------------------------ #$Date: 2014-07-11 22:06:05 +0100 (Fri, 11 Jul 2014) $ #$Revision: 120077 $ #$URL: svn://www.crystallography.net/cod/cif/4/11/64/4116417.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/ # # All data on this site have been placed in the public domain by the # contributors. # data_4116417 loop_ _publ_author_name 'Stephen L. De Wall' 'Eric S. Meadows' 'Leonard J. Barbour' 'George W. Gokel' _publ_section_title ; Solution- and Solid-State Evidence for Alkali Metal Cation-\p Interactions with Indole, the Side Chain of Tryptophan ; _journal_name_full 'Journal of the American Chemical Society' _journal_page_first 5613 _journal_page_last 5614 _journal_volume 121 _journal_year 1999 _chemical_formula_sum 'C32 H44 N4 O4' _chemical_formula_weight 548.71 _chemical_name_systematic ; ? ; _space_group_IT_number 14 _symmetry_space_group_name_Hall '-P 2ybc' _symmetry_space_group_name_H-M 'P 1 21/c 1' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL-97 _cell_angle_alpha 90.00 _cell_angle_beta 110.2130(10) _cell_angle_gamma 90.00 _cell_formula_units_Z 4 _cell_length_a 18.0798(9) _cell_length_b 12.1004(6) _cell_length_c 14.5384(7) _cell_measurement_temperature 173(2) _cell_volume 2984.7(3) _computing_structure_refinement 'SHELXL-97 (Sheldrick, 1997)' _computing_structure_solution 'SHELXS-97 (Sheldrick, 1990)' _diffrn_ambient_temperature 173(2) _diffrn_measured_fraction_theta_full 0.980 _diffrn_measured_fraction_theta_max 0.980 _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71070 _diffrn_reflns_av_R_equivalents 0.0246 _diffrn_reflns_av_sigmaI/netI 0.0331 _diffrn_reflns_limit_h_max 23 _diffrn_reflns_limit_h_min -22 _diffrn_reflns_limit_k_max 15 _diffrn_reflns_limit_k_min -15 _diffrn_reflns_limit_l_max 7 _diffrn_reflns_limit_l_min -18 _diffrn_reflns_number 17035 _diffrn_reflns_theta_full 27.16 _diffrn_reflns_theta_max 27.16 _diffrn_reflns_theta_min 1.20 _exptl_absorpt_coefficient_mu 0.081 _exptl_crystal_density_diffrn 1.221 _exptl_crystal_F_000 1184 _refine_diff_density_max 0.233 _refine_diff_density_min -0.199 _refine_diff_density_rms 0.036 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.033 _refine_ls_hydrogen_treatment mixed _refine_ls_matrix_type full _refine_ls_number_parameters 363 _refine_ls_number_reflns 6508 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.033 _refine_ls_R_factor_all 0.0648 _refine_ls_R_factor_gt 0.0458 _refine_ls_shift/su_max 0.001 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.0449P)^2^+1.0288P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.1034 _refine_ls_wR_factor_ref 0.1139 _reflns_number_gt 5039 _reflns_number_total 6508 _reflns_threshold_expression >2sigma(I) _[local]_cod_data_source_file ja9907921_1.cif _[local]_cod_data_source_block Indole _cod_database_code 4116417 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, y+1/2, -z+1/2' '-x, -y, -z' 'x, -y-1/2, z-1/2' loop_ _atom_site_label _atom_site_type_symbol _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_occupancy _atom_site_symmetry_multiplicity _atom_site_calc_flag _atom_site_refinement_flags O15A O 0.11735(6) 0.84187(9) 0.64604(8) 0.0354(3) Uani 1 1 d . O18A O 0.08039(6) 0.87664(9) 0.44202(8) 0.0348(3) Uani 1 1 d . N7A N -0.09329(8) 0.77457(12) 1.08618(10) 0.0384(3) Uani 1 1 d . N12A N -0.00287(8) 0.90341(11) 0.74258(9) 0.0325(3) Uani 1 1 d . C1A C -0.14895(9) 0.89363(13) 0.96136(11) 0.0322(3) Uani 1 1 d . C2A C -0.20343(10) 0.97431(14) 0.91124(13) 0.0405(4) Uani 1 1 d . H2A H -0.2039 1.0014 0.8497 0.049 Uiso 1 1 calc R C3A C -0.25671(11) 1.01419(16) 0.95245(16) 0.0520(5) Uani 1 1 d . H3A H -0.2945 1.0681 0.9184 0.062 Uiso 1 1 calc R C4A C -0.25529(12) 0.97558(17) 1.04415(15) 0.0521(5) Uani 1 1 d . H4A H -0.2923 1.0042 1.0711 0.062 Uiso 1 1 calc R C5A C -0.20204(11) 0.89776(15) 1.09587(13) 0.0438(4) Uani 1 1 d . H5A H -0.2014 0.8728 1.1581 0.053 Uiso 1 1 calc R C6A C -0.14893(10) 0.85653(13) 1.05425(12) 0.0350(4) Uani 1 1 d . C8A C -0.05975(9) 0.75766(14) 1.01540(11) 0.0358(4) Uani 1 1 d . H8A H -0.0202 0.7043 1.0196 0.043 Uiso 1 1 calc R C9A C -0.09112(9) 0.82791(13) 0.93862(11) 0.0311(3) Uani 1 1 d . C10A C -0.07285(9) 0.82409(13) 0.84542(11) 0.0329(3) Uani 1 1 d . H10B H -0.1225 0.8100 0.7903 0.039 Uiso 1 1 calc R H10A H -0.0373 0.7607 0.8491 0.039 Uiso 1 1 calc R C11A C -0.03483(10) 0.92744(13) 0.82219(12) 0.0367(4) Uani 1 1 d . H11B H -0.0744 0.9874 0.8013 0.044 Uiso 1 1 calc R H11A H 0.0083 0.9524 0.8816 0.044 Uiso 1 1 calc R C13A C 0.07764(9) 0.85780(14) 0.78791(11) 0.0367(4) Uani 1 1 d . H13B H 0.0798 0.8167 0.8477 0.044 Uiso 1 1 calc R H13A H 0.1150 0.9204 0.8088 0.044 Uiso 1 1 calc R C14A C 0.10598(10) 0.78199(14) 0.72431(12) 0.0360(4) Uani 1 1 d . H14B H 0.1562 0.7470 0.7646 0.043 Uiso 1 1 calc R H14A H 0.0667 0.7227 0.6973 0.043 Uiso 1 1 calc R C16A C 0.14794(10) 0.77431(14) 0.58755(12) 0.0371(4) Uani 1 1 d . H16B H 0.1117 0.7119 0.5599 0.044 Uiso 1 1 calc R H16A H 0.1998 0.7439 0.6280 0.044 Uiso 1 1 calc R C17A C 0.15654(9) 0.84406(14) 0.50620(12) 0.0362(4) Uani 1 1 d . H17B H 0.1886 0.9104 0.5340 0.043 Uiso 1 1 calc R H17A H 0.1838 0.8014 0.4693 0.043 Uiso 1 1 calc R C19A C 0.08486(10) 0.96775(13) 0.38272(12) 0.0359(4) Uani 1 1 d . H19B H 0.1184 0.9486 0.3437 0.043 Uiso 1 1 calc R H19A H 0.1087 1.0320 0.4246 0.043 Uiso 1 1 calc R C20A C 0.00258(10) 0.99647(13) 0.31514(11) 0.0344(4) Uani 1 1 d . H20B H -0.0193 0.9338 0.2701 0.041 Uiso 1 1 calc R H20A H -0.0318 1.0087 0.3545 0.041 Uiso 1 1 calc R O15B O 0.39738(6) 0.16421(9) 0.40999(8) 0.0344(3) Uani 1 1 d . O18B O 0.30300(7) -0.04653(10) 0.35209(9) 0.0444(3) Uani 1 1 d . N7B N 0.53667(8) 0.59276(10) 0.85333(9) 0.0309(3) Uani 1 1 d . N12B N 0.54281(8) 0.25100(10) 0.55422(9) 0.0311(3) Uani 1 1 d . C1B C 0.62063(9) 0.50721(12) 0.79302(10) 0.0280(3) Uani 1 1 d . C2B C 0.69389(9) 0.49121(14) 0.78160(11) 0.0349(4) Uani 1 1 d . H2B H 0.7020 0.4302 0.7450 0.042 Uiso 1 1 calc R C3B C 0.75370(10) 0.56509(15) 0.82415(12) 0.0415(4) Uani 1 1 d . H3B H 0.8035 0.5545 0.8171 0.050 Uiso 1 1 calc R C4B C 0.74237(10) 0.65562(15) 0.87762(12) 0.0423(4) Uani 1 1 d . H4B H 0.7845 0.7062 0.9049 0.051 Uiso 1 1 calc R C5B C 0.67192(10) 0.67335(13) 0.89178(11) 0.0359(4) Uani 1 1 d . H5B H 0.6648 0.7347 0.9286 0.043 Uiso 1 1 calc R C6B C 0.61123(9) 0.59772(12) 0.84998(10) 0.0281(3) Uani 1 1 d . C8B C 0.49866(9) 0.50336(13) 0.79922(11) 0.0320(3) Uani 1 1 d . H8B H 0.4459 0.4825 0.7899 0.038 Uiso 1 1 calc R C9B C 0.54717(9) 0.44885(12) 0.76091(11) 0.0307(3) Uani 1 1 d . C10B C 0.52966(11) 0.34447(13) 0.70166(12) 0.0387(4) Uani 1 1 d . H10D H 0.4761 0.3189 0.6952 0.046 Uiso 1 1 calc R H10C H 0.5675 0.2867 0.7373 0.046 Uiso 1 1 calc R C11B C 0.53452(11) 0.35802(13) 0.59882(12) 0.0367(4) Uani 1 1 d . H11D H 0.4863 0.3956 0.5560 0.044 Uiso 1 1 calc R H11C H 0.5802 0.4055 0.6031 0.044 Uiso 1 1 calc R C13B C 0.51942(10) 0.26077(13) 0.44687(11) 0.0376(4) Uani 1 1 d . H13D H 0.5412 0.1970 0.4219 0.045 Uiso 1 1 calc R H13C H 0.5433 0.3287 0.4313 0.045 Uiso 1 1 calc R C14B C 0.43212(11) 0.26492(13) 0.39414(12) 0.0406(4) Uani 1 1 d . H14D H 0.4093 0.3279 0.4186 0.049 Uiso 1 1 calc R H14C H 0.4209 0.2757 0.3231 0.049 Uiso 1 1 calc R C16B C 0.31837(10) 0.15436(15) 0.34426(13) 0.0450(4) Uani 1 1 d . H16D H 0.3184 0.1436 0.2768 0.054 Uiso 1 1 calc R H16C H 0.2894 0.2235 0.3454 0.054 Uiso 1 1 calc R C17B C 0.27712(10) 0.05903(16) 0.37147(14) 0.0453(4) Uani 1 1 d . H17D H 0.2851 0.0640 0.4422 0.054 Uiso 1 1 calc R H17C H 0.2199 0.0656 0.3350 0.054 Uiso 1 1 calc R C19B C 0.36604(10) -0.09138(13) 0.43117(11) 0.0357(4) Uani 1 1 d . H19D H 0.3537 -0.0888 0.4924 0.043 Uiso 1 1 calc R H19C H 0.4151 -0.0490 0.4412 0.043 Uiso 1 1 calc R C20B C 0.37586(10) -0.21044(13) 0.40368(12) 0.0381(4) Uani 1 1 d . H20D H 0.3412 -0.2584 0.4262 0.046 Uiso 1 1 calc R H20C H 0.3585 -0.2163 0.3314 0.046 Uiso 1 1 calc R H7B H 0.5125 0.6397 0.8847 0.049(5) Uiso 1 1 d R H7A H -0.0813 0.7340 1.1477 0.067(6) Uiso 1 1 d R loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_23 _atom_site_aniso_U_13 _atom_site_aniso_U_12 O15A 0.0436(6) 0.0338(6) 0.0335(6) 0.0036(5) 0.0194(5) 0.0007(5) O18A 0.0368(6) 0.0347(6) 0.0346(6) 0.0058(5) 0.0145(5) -0.0017(5) N7A 0.0440(8) 0.0444(8) 0.0286(7) 0.0034(6) 0.0148(6) -0.0047(6) N12A 0.0400(7) 0.0339(7) 0.0274(6) 0.0022(5) 0.0165(6) -0.0023(6) C1A 0.0349(8) 0.0335(8) 0.0302(8) -0.0047(6) 0.0140(6) -0.0067(7) C2A 0.0461(10) 0.0363(9) 0.0421(9) -0.0022(7) 0.0189(8) 0.0016(8) C3A 0.0498(11) 0.0418(10) 0.0677(13) -0.0039(9) 0.0245(10) 0.0067(8) C4A 0.0550(11) 0.0507(11) 0.0653(13) -0.0180(10) 0.0397(10) -0.0068(9) C5A 0.0538(11) 0.0439(10) 0.0443(10) -0.0138(8) 0.0304(9) -0.0154(8) C6A 0.0405(9) 0.0357(8) 0.0320(8) -0.0075(7) 0.0164(7) -0.0122(7) C8A 0.0338(8) 0.0399(9) 0.0345(8) 0.0024(7) 0.0127(7) -0.0024(7) C9A 0.0316(8) 0.0340(8) 0.0293(8) 0.0007(6) 0.0126(6) -0.0046(6) C10A 0.0357(8) 0.0339(8) 0.0314(8) 0.0003(6) 0.0146(7) -0.0006(7) C11A 0.0501(10) 0.0349(8) 0.0309(8) -0.0019(7) 0.0216(7) -0.0038(7) C13A 0.0394(9) 0.0434(9) 0.0266(8) 0.0041(7) 0.0105(7) -0.0058(7) C14A 0.0354(8) 0.0385(9) 0.0342(8) 0.0089(7) 0.0121(7) -0.0003(7) C16A 0.0381(9) 0.0358(8) 0.0384(9) 0.0016(7) 0.0146(7) 0.0062(7) C17A 0.0360(8) 0.0406(9) 0.0346(8) -0.0018(7) 0.0153(7) 0.0027(7) C19A 0.0437(9) 0.0332(8) 0.0346(8) 0.0018(7) 0.0184(7) -0.0046(7) C20A 0.0434(9) 0.0329(8) 0.0305(8) 0.0009(6) 0.0174(7) -0.0050(7) O15B 0.0385(6) 0.0318(6) 0.0306(6) 0.0028(5) 0.0089(5) 0.0042(5) O18B 0.0455(7) 0.0464(7) 0.0365(6) -0.0097(5) 0.0082(5) 0.0005(6) N7B 0.0393(7) 0.0251(6) 0.0324(7) -0.0027(5) 0.0177(6) 0.0030(5) N12B 0.0455(7) 0.0254(6) 0.0276(6) -0.0058(5) 0.0191(6) -0.0073(6) C1B 0.0393(8) 0.0241(7) 0.0231(7) 0.0032(6) 0.0141(6) 0.0023(6) C2B 0.0421(9) 0.0360(8) 0.0315(8) 0.0028(7) 0.0188(7) 0.0063(7) C3B 0.0364(9) 0.0549(11) 0.0365(9) 0.0092(8) 0.0169(7) 0.0012(8) C4B 0.0440(9) 0.0476(10) 0.0321(8) 0.0025(8) 0.0091(7) -0.0144(8) C5B 0.0496(9) 0.0309(8) 0.0271(8) -0.0025(6) 0.0132(7) -0.0054(7) C6B 0.0393(8) 0.0235(7) 0.0226(7) 0.0035(6) 0.0120(6) 0.0020(6) C8B 0.0387(8) 0.0296(8) 0.0312(8) -0.0007(6) 0.0163(7) -0.0027(6) C9B 0.0444(9) 0.0243(7) 0.0281(7) -0.0014(6) 0.0183(7) -0.0036(6) C10B 0.0607(11) 0.0274(8) 0.0373(9) -0.0076(7) 0.0290(8) -0.0104(7) C11B 0.0558(10) 0.0258(8) 0.0341(8) -0.0067(6) 0.0226(8) -0.0091(7) C13B 0.0600(11) 0.0300(8) 0.0300(8) -0.0030(6) 0.0247(8) -0.0113(8) C14B 0.0640(11) 0.0279(8) 0.0294(8) 0.0033(6) 0.0157(8) 0.0025(8) C16B 0.0404(9) 0.0459(10) 0.0406(10) -0.0009(8) 0.0037(8) 0.0138(8) C17B 0.0320(9) 0.0571(11) 0.0442(10) -0.0092(9) 0.0099(8) 0.0061(8) C19B 0.0393(9) 0.0376(9) 0.0317(8) -0.0071(7) 0.0144(7) -0.0052(7) C20B 0.0423(9) 0.0368(9) 0.0389(9) -0.0116(7) 0.0186(7) -0.0129(7) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_site_symmetry_1 C16A O15A C14A 112.28(12) . C19A O18A C17A 111.57(12) . C6A N7A C8A 108.33(13) . C20A N12A C13A 111.28(12) 3_576 C20A N12A C11A 111.12(12) 3_576 C13A N12A C11A 108.19(12) . C2A C1A C6A 118.93(15) . C2A C1A C9A 134.58(15) . C6A C1A C9A 106.35(14) . C3A C2A C1A 119.17(17) . C2A C3A C4A 120.49(18) . C5A C4A C3A 121.89(17) . C4A C5A C6A 117.84(17) . N7A C6A C5A 130.25(16) . N7A C6A C1A 107.97(14) . C5A C6A C1A 121.68(16) . C9A C8A N7A 110.69(15) . C8A C9A C1A 106.65(14) . C8A C9A C10A 124.14(15) . C1A C9A C10A 128.86(14) . C9A C10A C11A 115.61(13) . N12A C11A C10A 109.78(12) . N12A C13A C14A 116.26(13) . O15A C14A C13A 110.69(13) . O15A C16A C17A 108.35(13) . O18A C17A C16A 109.32(13) . O18A C19A C20A 108.87(12) . N12A C20A C19A 111.23(13) 3_576 C16B O15B C14B 111.05(12) . C19B O18B C17B 114.25(12) . C6B N7B C8B 108.57(12) . C20B N12B C13B 110.35(12) 3_656 C20B N12B C11B 110.40(12) 3_656 C13B N12B C11B 111.01(12) . C2B C1B C6B 118.93(14) . C2B C1B C9B 134.41(14) . C6B C1B C9B 106.64(13) . C3B C2B C1B 118.99(15) . C2B C3B C4B 121.07(16) . C5B C4B C3B 121.76(16) . C4B C5B C6B 117.50(15) . N7B C6B C5B 130.51(14) . N7B C6B C1B 107.79(13) . C5B C6B C1B 121.71(14) . C9B C8B N7B 110.51(14) . C8B C9B C1B 106.48(13) . C8B C9B C10B 127.25(15) . C1B C9B C10B 126.18(14) . C9B C10B C11B 113.41(13) . N12B C11B C10B 112.44(12) . N12B C13B C14B 114.23(13) . O15B C14B C13B 109.49(13) . O15B C16B C17B 111.27(14) . O18B C17B C16B 114.29(14) . O18B C19B C20B 106.47(13) . N12B C20B C19B 113.45(13) 3_656 loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance _geom_bond_site_symmetry_2 O15A C16A 1.4221(19) . O15A C14A 1.4226(18) . O18A C19A 1.4189(18) . O18A C17A 1.4261(19) . N7A C6A 1.374(2) . N7A C8A 1.378(2) . N12A C20A 1.4748(19) 3_576 N12A C13A 1.482(2) . N12A C11A 1.4900(19) . C1A C2A 1.399(2) . C1A C6A 1.423(2) . C1A C9A 1.440(2) . C2A C3A 1.385(2) . C3A C4A 1.404(3) . C4A C5A 1.371(3) . C5A C6A 1.392(2) . C8A C9A 1.361(2) . C9A C10A 1.502(2) . C10A C11A 1.520(2) . C13A C14A 1.512(2) . C16A C17A 1.504(2) . C19A C20A 1.513(2) . C20A N12A 1.4748(19) 3_576 O15B C16B 1.4230(19) . O15B C14B 1.4256(19) . O18B C19B 1.418(2) . O18B C17B 1.422(2) . N7B C6B 1.367(2) . N7B C8B 1.374(2) . N12B C20B 1.468(2) 3_656 N12B C13B 1.4740(19) . N12B C11B 1.4789(19) . C1B C2B 1.404(2) . C1B C6B 1.418(2) . C1B C9B 1.432(2) . C2B C3B 1.374(2) . C3B C4B 1.399(3) . C4B C5B 1.375(2) . C5B C6B 1.396(2) . C8B C9B 1.361(2) . C9B C10B 1.500(2) . C10B C11B 1.537(2) . C13B C14B 1.499(2) . C16B C17B 1.499(3) . C19B C20B 1.522(2) . C20B N12B 1.468(2) 3_656 _journal_paper_doi 10.1021/ja9907921