#------------------------------------------------------------------------------ #$Date: 2025-08-20 15:59:05 +0100 (Wed, 20 Aug 2025) $ #$Revision: 301833 $ #$URL: svn://www.crystallography.net/cod/cif/4/11/64/4116419.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/ # # All data on this site have been placed in the public domain by the # contributors. # data_4116419 loop_ _publ_author_name 'Stephen L. De Wall' 'Eric S. Meadows' 'Leonard J. Barbour' 'George W. Gokel' _publ_section_title ; Solution- and Solid-State Evidence for Alkali Metal Cation-\p Interactions with Indole, the Side Chain of Tryptophan ; _journal_name_full 'Journal of the American Chemical Society' _journal_page_first 5613 _journal_page_last 5614 _journal_paper_doi 10.1021/ja9907921 _journal_volume 121 _journal_year 1999 _chemical_formula_sum 'C32 H44 I K N4 O4' _chemical_formula_weight 714.71 _space_group_IT_number 15 _symmetry_space_group_name_Hall '-C 2yc' _symmetry_space_group_name_H-M 'C 1 2/c 1' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL-97 _cell_angle_alpha 90.00 _cell_angle_beta 90.2610(10) _cell_angle_gamma 90.00 _cell_formula_units_Z 4 _cell_length_a 17.2370(10) _cell_length_b 12.0426(7) _cell_length_c 15.9510(9) _cell_measurement_temperature 173(2) _cell_volume 3311.0(3) _computing_structure_refinement 'SHELXL-97 (Sheldrick, 1997)' _computing_structure_solution 'SHELXS-97 (Sheldrick, 1990)' _diffrn_ambient_temperature 173(2) _diffrn_measured_fraction_theta_full 0.984 _diffrn_measured_fraction_theta_max 0.984 _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0323 _diffrn_reflns_av_sigmaI/netI 0.0356 _diffrn_reflns_limit_h_max 20 _diffrn_reflns_limit_h_min -22 _diffrn_reflns_limit_k_max 15 _diffrn_reflns_limit_k_min -15 _diffrn_reflns_limit_l_max 20 _diffrn_reflns_limit_l_min -17 _diffrn_reflns_number 9687 _diffrn_reflns_theta_full 27.14 _diffrn_reflns_theta_max 27.14 _diffrn_reflns_theta_min 2.06 _exptl_absorpt_coefficient_mu 1.134 _exptl_crystal_density_diffrn 1.434 _exptl_crystal_F_000 1472 _refine_diff_density_max 0.687 _refine_diff_density_min -0.729 _refine_diff_density_rms 0.058 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.034 _refine_ls_hydrogen_treatment mixed _refine_ls_matrix_type full _refine_ls_number_parameters 193 _refine_ls_number_reflns 3620 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.034 _refine_ls_R_factor_all 0.0381 _refine_ls_R_factor_gt 0.0291 _refine_ls_shift/su_max 0.001 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.0352P)^2^+0.8138P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.0682 _refine_ls_wR_factor_ref 0.0711 _reflns_number_gt 3060 _reflns_number_total 3620 _reflns_threshold_expression >2sigma(I) _cod_data_source_file ja9907921_3.cif _cod_data_source_block IndoleKI _cod_database_code 4116419 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, y, -z+1/2' 'x+1/2, y+1/2, z' '-x+1/2, y+1/2, -z+1/2' '-x, -y, -z' 'x, -y, z-1/2' '-x+1/2, -y+1/2, -z' 'x+1/2, -y+1/2, z-1/2' loop_ _atom_site_label _atom_site_type_symbol _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_occupancy _atom_site_symmetry_multiplicity _atom_site_calc_flag _atom_site_refinement_flags I1 I 0.0000 0.120646(19) 0.2500 0.04058(9) Uani 1 2 d S K1 K 0.2500 0.2500 0.5000 0.03566(16) Uani 1 2 d S O15 O 0.14364(9) 0.37558(12) 0.42813(10) 0.0363(3) Uani 1 1 d . O18 O 0.29921(9) 0.41936(12) 0.39683(10) 0.0380(3) Uani 1 1 d . N7 N 0.30389(10) 0.39138(16) 0.68337(12) 0.0372(4) Uani 1 1 d . C1 C 0.19963(11) 0.49546(18) 0.65060(12) 0.0306(4) Uani 1 1 d . C9 C 0.17350(12) 0.38849(17) 0.67899(12) 0.0308(4) Uani 1 1 d . N12 N 0.08090(9) 0.24200(15) 0.55643(11) 0.0317(4) Uani 1 1 d . C3 C 0.20629(16) 0.6838(2) 0.60313(15) 0.0482(6) Uani 1 1 d . H3 H 0.1812 0.7498 0.5849 0.058 Uiso 1 1 calc R C20 C 0.43258(14) 0.36743(19) 0.40466(16) 0.0419(5) Uani 1 1 d . H20A H 0.4325 0.3585 0.3430 0.050 Uiso 1 1 calc R H20B H 0.4846 0.3943 0.4216 0.050 Uiso 1 1 calc R C8 C 0.23847(13) 0.32957(19) 0.69865(13) 0.0345(5) Uani 1 1 d . H8 H 0.2386 0.2559 0.7200 0.041 Uiso 1 1 calc R C6 C 0.28161(11) 0.49470(18) 0.65536(12) 0.0316(4) Uani 1 1 d . C5 C 0.32608(14) 0.5876(2) 0.63503(15) 0.0420(6) Uani 1 1 d . H5 H 0.3811 0.5863 0.6394 0.050 Uiso 1 1 calc R C2 C 0.16226(14) 0.59265(19) 0.62387(14) 0.0402(5) Uani 1 1 d . H2 H 0.1073 0.5956 0.6201 0.048 Uiso 1 1 calc R C19 C 0.37345(14) 0.45401(19) 0.42771(16) 0.0419(5) Uani 1 1 d . H19A H 0.3717 0.4628 0.4894 0.050 Uiso 1 1 calc R H19B H 0.3877 0.5264 0.4027 0.050 Uiso 1 1 calc R C4 C 0.28762(16) 0.6812(2) 0.60841(15) 0.0487(6) Uani 1 1 d . H4 H 0.3165 0.7452 0.5933 0.058 Uiso 1 1 calc R C16 C 0.16628(14) 0.46245(19) 0.37292(14) 0.0431(6) Uani 1 1 d . H16A H 0.1273 0.5228 0.3740 0.052 Uiso 1 1 calc R H16B H 0.1696 0.4339 0.3149 0.052 Uiso 1 1 calc R C17 C 0.24302(14) 0.50586(18) 0.40011(15) 0.0421(5) Uani 1 1 d . H17A H 0.2589 0.5676 0.3630 0.051 Uiso 1 1 calc R H17B H 0.2395 0.5349 0.4580 0.051 Uiso 1 1 calc R C10 C 0.09095(13) 0.3521(2) 0.68963(14) 0.0407(5) Uani 1 1 d . H10A H 0.0629 0.4097 0.7217 0.049 Uiso 1 1 calc R H10B H 0.0903 0.2830 0.7233 0.049 Uiso 1 1 calc R C11 C 0.04741(12) 0.3312(2) 0.60732(14) 0.0373(5) Uani 1 1 d . H11A H -0.0071 0.3122 0.6202 0.045 Uiso 1 1 calc R H11B H 0.0471 0.4006 0.5740 0.045 Uiso 1 1 calc R C14 C 0.06406(13) 0.3470(2) 0.42175(15) 0.0416(5) Uani 1 1 d . H14A H 0.0500 0.3350 0.3622 0.050 Uiso 1 1 calc R H14B H 0.0319 0.4085 0.4436 0.050 Uiso 1 1 calc R C13 C 0.04822(13) 0.2430(2) 0.47104(14) 0.0407(5) Uani 1 1 d . H13A H -0.0086 0.2327 0.4748 0.049 Uiso 1 1 calc R H13B H 0.0695 0.1789 0.4398 0.049 Uiso 1 1 calc R H7 H 0.3503 0.3748 0.7039 0.043(7) Uiso 1 1 d R loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_23 _atom_site_aniso_U_13 _atom_site_aniso_U_12 I1 0.02543(11) 0.06005(16) 0.03618(12) 0.000 -0.00857(8) 0.000 K1 0.0236(3) 0.0436(4) 0.0397(4) 0.0194(3) 0.0034(3) 0.0053(3) O15 0.0317(8) 0.0422(8) 0.0351(8) 0.0100(7) -0.0050(6) 0.0066(7) O18 0.0390(9) 0.0333(8) 0.0419(9) 0.0025(7) 0.0064(7) 0.0009(7) N7 0.0219(9) 0.0511(12) 0.0387(10) -0.0041(8) -0.0052(8) 0.0051(8) C1 0.0236(10) 0.0455(12) 0.0225(10) -0.0085(9) -0.0007(8) 0.0034(9) C9 0.0254(10) 0.0451(12) 0.0219(9) -0.0052(8) 0.0023(8) -0.0011(9) N12 0.0238(9) 0.0402(10) 0.0312(9) -0.0041(7) 0.0044(7) -0.0006(7) C3 0.0620(17) 0.0399(14) 0.0427(14) -0.0042(11) -0.0070(12) 0.0068(12) C20 0.0322(12) 0.0493(14) 0.0446(13) -0.0016(11) 0.0149(10) -0.0079(10) C8 0.0350(12) 0.0412(12) 0.0272(10) -0.0010(9) -0.0017(9) 0.0013(9) C6 0.0265(10) 0.0438(12) 0.0245(10) -0.0084(9) 0.0023(8) 0.0012(9) C5 0.0321(12) 0.0558(15) 0.0382(12) -0.0135(11) 0.0053(10) -0.0088(10) C2 0.0342(12) 0.0492(14) 0.0372(12) -0.0081(10) -0.0049(10) 0.0089(10) C19 0.0414(13) 0.0364(12) 0.0480(14) 0.0011(10) 0.0111(11) -0.0079(10) C4 0.0608(17) 0.0435(14) 0.0419(13) -0.0064(11) 0.0060(12) -0.0139(12) C16 0.0516(14) 0.0433(13) 0.0343(12) 0.0115(10) 0.0011(11) 0.0153(11) C17 0.0532(14) 0.0298(11) 0.0433(13) 0.0077(10) 0.0069(11) 0.0067(10) C10 0.0295(11) 0.0589(15) 0.0338(12) -0.0101(10) 0.0089(9) -0.0069(10) C11 0.0203(10) 0.0484(13) 0.0431(13) -0.0112(10) 0.0041(9) 0.0016(9) C14 0.0307(11) 0.0552(14) 0.0387(12) -0.0052(10) -0.0100(10) 0.0121(10) C13 0.0278(11) 0.0531(14) 0.0411(13) -0.0099(10) -0.0037(10) -0.0025(10) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' K K 0.2009 0.2494 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' I I -0.4742 1.8119 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_site_symmetry_1 _geom_angle_site_symmetry_3 O15 K1 O15 180.0 7_556 . O15 K1 O18 62.03(5) 7_556 7_556 O15 K1 O18 117.97(5) . 7_556 O15 K1 O18 117.97(5) 7_556 . O15 K1 O18 62.03(5) . . O18 K1 O18 180.0 7_556 . O15 K1 N12 58.91(5) 7_556 7_556 O15 K1 N12 121.09(5) . 7_556 O18 K1 N12 119.71(5) 7_556 7_556 O18 K1 N12 60.29(5) . 7_556 O15 K1 N12 121.09(5) 7_556 . O15 K1 N12 58.91(5) . . O18 K1 N12 60.29(5) 7_556 . O18 K1 N12 119.71(5) . . N12 K1 N12 180.000(18) 7_556 . O15 K1 C8 101.84(5) 7_556 7_556 O15 K1 C8 78.16(5) . 7_556 O18 K1 C8 112.11(5) 7_556 7_556 O18 K1 C8 67.89(5) . 7_556 N12 K1 C8 70.51(5) 7_556 7_556 N12 K1 C8 109.49(5) . 7_556 O15 K1 C19 82.81(5) 7_556 7_556 O15 K1 C19 97.19(5) . 7_556 O18 K1 C19 23.40(5) 7_556 7_556 O18 K1 C19 156.60(5) . 7_556 N12 K1 C19 135.32(5) 7_556 7_556 N12 K1 C19 44.68(5) . 7_556 C8 K1 C19 98.81(6) 7_556 7_556 O15 K1 C17 42.96(5) 7_556 7_556 O15 K1 C17 137.04(5) . 7_556 O18 K1 C17 22.97(5) 7_556 7_556 O18 K1 C17 157.03(5) . 7_556 N12 K1 C17 97.59(5) 7_556 7_556 N12 K1 C17 82.41(5) . 7_556 C8 K1 C17 100.37(6) 7_556 7_556 C19 K1 C17 40.08(6) 7_556 7_556 O15 K1 C13 43.02(5) 7_556 7_556 O15 K1 C13 136.98(5) . 7_556 O18 K1 C13 104.28(5) 7_556 7_556 O18 K1 C13 75.72(5) . 7_556 N12 K1 C13 24.70(5) 7_556 7_556 N12 K1 C13 155.30(5) . 7_556 C8 K1 C13 93.96(5) 7_556 7_556 C19 K1 C13 125.83(6) 7_556 7_556 C17 K1 C13 85.90(6) 7_556 7_556 C14 O15 C16 113.72(17) . . C14 O15 K1 124.25(12) . . C16 O15 K1 119.93(13) . . C17 O18 C19 112.42(17) . . C17 O18 K1 107.95(12) . . C19 O18 K1 106.69(12) . . C8 N7 C6 108.64(18) . . C2 C1 C6 118.6(2) . . C2 C1 C9 134.4(2) . . C6 C1 C9 106.94(18) . . C8 C9 C1 106.32(18) . . C8 C9 C10 127.0(2) . . C1 C9 C10 126.6(2) . . C11 N12 C13 110.87(17) . . C11 N12 C20 110.99(17) . 7_556 C13 N12 C20 109.67(17) . 7_556 C11 N12 K1 121.22(12) . . C13 N12 K1 95.09(12) . . C20 N12 K1 107.71(12) 7_556 . C2 C3 C4 121.3(2) . . N12 C20 C19 114.07(18) 7_556 . C9 C8 N7 110.6(2) . . N7 C6 C5 130.4(2) . . N7 C6 C1 107.48(19) . . C5 C6 C1 122.1(2) . . C4 C5 C6 117.7(2) . . C3 C2 C1 119.1(2) . . O18 C19 C20 108.63(18) . . C5 C4 C3 121.1(2) . . O15 C16 C17 108.93(18) . . O18 C17 C16 109.69(19) . . C9 C10 C11 114.39(18) . . N12 C11 C10 113.75(18) . . O15 C14 C13 110.04(17) . . N12 C13 C14 114.92(18) . . loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance _geom_bond_site_symmetry_2 K1 O15 2.6350(14) 7_556 K1 O15 2.6350(14) . K1 O18 2.7569(15) 7_556 K1 O18 2.7569(15) . K1 N12 3.0561(16) 7_556 K1 N12 3.0561(16) . K1 C8 3.317(2) 7_556 K1 C19 3.452(2) 7_556 K1 C17 3.471(2) 7_556 K1 C13 3.507(2) 7_556 O15 C14 1.417(3) . O15 C16 1.423(3) . O18 C17 1.423(3) . O18 C19 1.431(3) . N7 C8 1.374(3) . N7 C6 1.376(3) . C1 C2 1.401(3) . C1 C6 1.415(3) . C1 C9 1.438(3) . C9 C8 1.361(3) . C9 C10 1.499(3) . N12 C11 1.466(3) . N12 C13 1.471(3) . N12 C20 1.476(3) 7_556 C3 C2 1.375(4) . C3 C4 1.404(4) . C20 N12 1.476(3) 7_556 C20 C19 1.505(3) . C6 C5 1.396(3) . C5 C4 1.373(4) . C16 C17 1.485(3) . C10 C11 1.530(3) . C14 C13 1.504(3) . loop_ _cod_related_entry_id _cod_related_entry_database _cod_related_entry_code 1 PubChem 168333180