#------------------------------------------------------------------------------ #$Date: 2013-01-22 08:41:51 +0000 (Tue, 22 Jan 2013) $ #$Revision: 72605 $ #$URL: svn://www.crystallography.net/cod/cif/4/11/64/4116489.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/ # # All data on this site have been placed in the public domain by the # contributors. # data_4116489 loop_ _publ_author_name 'Javier Adrio' 'Juan C. Carretero' _publ_section_title ; The tert-Butylsulfinyl Group as a Highly Efficient Chiral Auxiliary in Asymmetric Pauson-Khand Reactions ; _journal_name_full 'Journal of the American Chemical Society' _journal_page_first 7411 _journal_page_last 7412 _journal_volume 121 _journal_year 1999 _chemical_formula_sum 'C12 H18 O2 S' _chemical_formula_weight 226.32 _chemical_name_systematic ; (4R,5S,S(S))-4-(tert-butylsulfinyl)bicyclo(3.3.0)oct-1-en-3-one ; _space_group_IT_number 19 _symmetry_cell_setting orthorhombic _symmetry_space_group_name_Hall 'P 2ac 2ab' _symmetry_space_group_name_H-M 'P 21 21 21' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL _cell_angle_alpha 90.00 _cell_angle_beta 90.00 _cell_angle_gamma 90.00 _cell_formula_units_Z 4 _cell_length_a 10.526(3) _cell_length_b 10.774(3) _cell_length_c 10.818(5) _cell_measurement_temperature 296(2) _cell_volume 1226.8(7) _computing_molecular_graphics SHELXTL-Plus _computing_publication_material XL _computing_structure_refinement 'SHELXL-93 (Sheldrick, 1993)' _computing_structure_solution 'SHELXS-86 (Sheldrick, 1990)' _diffrn_ambient_temperature 296(2) _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type CuK\a _diffrn_radiation_wavelength 1.54178 _diffrn_reflns_av_R_equivalents 0.0637 _diffrn_reflns_av_sigmaI/netI 0.0295 _diffrn_reflns_limit_h_max 11 _diffrn_reflns_limit_h_min -1 _diffrn_reflns_limit_k_max 11 _diffrn_reflns_limit_k_min -1 _diffrn_reflns_limit_l_max 11 _diffrn_reflns_limit_l_min -1 _diffrn_reflns_number 1342 _diffrn_reflns_theta_max 57.02 _diffrn_reflns_theta_min 5.80 _exptl_absorpt_coefficient_mu 2.174 _exptl_absorpt_correction_type none _exptl_crystal_colour Yellow _exptl_crystal_density_diffrn 1.225 _exptl_crystal_description 'Transparent blocks' _exptl_crystal_F_000 488 _exptl_crystal_size_max O.36 _exptl_crystal_size_mid 0.32 _exptl_crystal_size_min 0.28 _refine_diff_density_max 0.126 _refine_diff_density_min -0.155 _refine_diff_density_rms 0.033 _refine_ls_abs_structure_details 'Flack H D (1983), Acta Cryst. A39, 876-881' _refine_ls_abs_structure_Flack 0.00(3) _refine_ls_extinction_coef 0.0179(17) _refine_ls_extinction_expression Fc^*^=kFc[1+0.001xFc^2^\l^3^/sin(2\q)]^-1/4^ _refine_ls_extinction_method SHELXL _refine_ls_goodness_of_fit_all 0.586 _refine_ls_goodness_of_fit_obs 0.582 _refine_ls_hydrogen_treatment refxyz _refine_ls_matrix_type full _refine_ls_number_parameters 137 _refine_ls_number_reflns 1207 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 0.586 _refine_ls_restrained_S_obs 0.582 _refine_ls_R_factor_all 0.0364 _refine_ls_R_factor_obs 0.0353 _refine_ls_shift/esd_max 0.092 _refine_ls_shift/esd_mean 0.015 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_scheme 'calc w=1/[\s^2^(Fo^2^)+(0.1354P)^2^+1.1054P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_wR_factor_all 0.1055 _refine_ls_wR_factor_obs 0.1026 _reflns_number_observed 1159 _reflns_number_total 1207 _reflns_observed_criterion >2sigma(I) _journal_paper_doi 10.1021/ja990546p _[local]_cod_data_source_file ja990546p.cif _[local]_cod_data_source_block jcjav _cod_original_cell_volume 1227.00(7) _cod_database_code 4116489 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x+1/2, -y, z+1/2' '-x, y+1/2, -z+1/2' 'x+1/2, -y+1/2, -z' loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_23 _atom_site_aniso_U_13 _atom_site_aniso_U_12 S1 0.0491(5) 0.0521(5) 0.0581(5) -0.0047(4) -0.0058(4) 0.0007(4) O1 0.0706(15) 0.105(2) 0.0484(13) -0.0130(14) -0.0052(11) 0.019(2) O2 0.078(2) 0.076(2) 0.127(3) 0.043(2) 0.004(2) -0.010(2) C1 0.053(2) 0.066(2) 0.064(2) -0.002(2) 0.005(2) 0.001(2) C2 0.058(2) 0.061(2) 0.097(3) 0.002(2) -0.004(2) 0.006(2) C3 0.055(2) 0.056(2) 0.065(2) 0.013(2) -0.005(2) -0.004(2) C4 0.045(2) 0.053(2) 0.040(2) 0.0014(14) -0.0012(12) 0.0000(15) C5 0.050(2) 0.055(2) 0.047(2) 0.002(2) -0.0012(15) -0.007(2) C6 0.066(2) 0.063(2) 0.070(2) 0.001(2) 0.000(2) -0.018(2) C7 0.060(2) 0.091(3) 0.167(6) 0.012(4) -0.002(3) -0.021(2) C8 0.053(2) 0.096(3) 0.109(3) 0.019(3) 0.010(2) -0.006(2) C9 0.049(2) 0.056(2) 0.065(2) 0.003(2) 0.0031(15) 0.006(2) C10 0.073(2) 0.049(2) 0.139(4) 0.007(2) 0.004(3) 0.007(2) C11 0.059(2) 0.087(3) 0.083(3) 0.009(2) -0.007(2) 0.011(2) C12 0.072(2) 0.087(3) 0.077(3) -0.006(2) 0.014(2) 0.018(2) loop_ _atom_site_label _atom_site_type_symbol _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_thermal_displace_type _atom_site_occupancy _atom_site_calc_flag _atom_site_refinement_flags S1 S 0.16344(7) 0.42302(7) 0.79745(8) 0.0531(3) Uani 1 d . O1 O 0.2122(2) 0.4280(3) 0.6673(2) 0.0746(8) Uani 1 d . O2 O 0.2862(3) 0.2248(3) 0.9648(3) 0.0935(11) Uani 1 d . C1 C 0.5234(3) 0.4120(3) 0.8516(3) 0.0612(9) Uani 1 d . C2 C 0.4871(4) 0.3054(3) 0.8987(4) 0.0717(11) Uani 1 d . H2 H 0.5406(4) 0.2383(3) 0.9135(4) 0.086 Uiso 1 calc R C3 C 0.3520(3) 0.3072(3) 0.9241(4) 0.0587(9) Uani 1 d . C4 C 0.3037(3) 0.4395(3) 0.8957(3) 0.0462(8) Uani 1 d . H4 H 0.2805(3) 0.4815(3) 0.9728(3) 0.055 Uiso 1 calc R C5 C 0.4180(3) 0.5038(3) 0.8374(3) 0.0505(8) Uani 1 d . H5 H 0.4016(3) 0.5178(3) 0.7493(3) 0.061 Uiso 1 calc R C6 C 0.4771(3) 0.6215(3) 0.8941(4) 0.0662(10) Uani 1 d . H6A H 0.4450(3) 0.6956(3) 0.8538(4) 0.079 Uiso 1 calc R H6B H 0.4590(3) 0.6267(3) 0.9819(4) 0.079 Uiso 1 calc R C7 C 0.6204(4) 0.6061(4) 0.8711(7) 0.106(2) Uani 1 d . H7A H 0.6477(4) 0.6629(4) 0.8069(7) 0.127 Uiso 1 calc R H7B H 0.6671(4) 0.6255(4) 0.9460(7) 0.127 Uiso 1 calc R C8 C 0.6478(4) 0.4750(4) 0.8325(5) 0.0864(14) Uani 1 d . H8A H 0.6739(4) 0.4711(4) 0.7466(5) 0.104 Uiso 1 calc R H8B H 0.7135(4) 0.4383(4) 0.8837(5) 0.104 Uiso 1 calc R C9 C 0.0748(3) 0.5669(3) 0.8270(3) 0.0567(8) Uani 1 d . C10 C 0.1573(4) 0.6820(3) 0.8121(5) 0.0870(14) Uani 1 d . H10A H 0.2232(4) 0.6813(3) 0.8734(5) 0.130 Uiso 1 calc R H10B H 0.1059(4) 0.7549(3) 0.8223(5) 0.130 Uiso 1 calc R H10C H 0.1947(4) 0.6823(3) 0.7312(5) 0.130 Uiso 1 calc R C11 C -0.0311(3) 0.5655(4) 0.7304(4) 0.0762(11) Uani 1 d . H11A H -0.0821(3) 0.4924(4) 0.7412(4) 0.114 Uiso 1 calc R H11B H 0.0055(3) 0.5652(4) 0.6492(4) 0.114 Uiso 1 calc R H11C H -0.0833(3) 0.6379(4) 0.7403(4) 0.114 Uiso 1 calc R C12 C 0.0192(4) 0.5555(4) 0.9574(4) 0.0788(12) Uani 1 d . H12A H -0.0320(4) 0.4819(4) 0.9625(4) 0.118 Uiso 1 calc R H12B H -0.0324(4) 0.6269(4) 0.9749(4) 0.118 Uiso 1 calc R H12C H 0.0870(4) 0.5505(4) 1.0165(4) 0.118 Uiso 1 calc R loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0181 0.0091 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0492 0.0322 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' S S 0.3331 0.5567 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle O1 S1 C4 105.42(14) O1 S1 C9 107.9(2) C4 S1 C9 103.2(2) C2 C1 C8 135.1(4) C2 C1 C5 113.7(3) C8 C1 C5 109.7(3) C1 C2 C3 110.4(3) O2 C3 C2 128.5(3) O2 C3 C4 124.1(3) C2 C3 C4 107.3(3) C5 C4 C3 104.0(2) C5 C4 S1 116.2(2) C3 C4 S1 107.0(2) C1 C5 C4 104.0(2) C1 C5 C6 101.8(3) C4 C5 C6 121.9(3) C7 C6 C5 104.0(3) C8 C7 C6 109.6(3) C1 C8 C7 102.8(3) C10 C9 C11 110.6(3) C10 C9 C12 112.3(3) C11 C9 C12 110.5(3) C10 C9 S1 112.3(2) C11 C9 S1 104.1(2) C12 C9 S1 106.6(3) loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance S1 O1 1.500(3) S1 C4 1.828(3) S1 C9 1.838(3) O2 C3 1.209(4) C1 C2 1.313(5) C1 C8 1.489(5) C1 C5 1.495(5) C2 C3 1.449(5) C3 C4 1.544(5) C4 C5 1.525(4) C5 C6 1.540(5) C6 C7 1.538(6) C7 C8 1.501(7) C9 C10 1.523(5) C9 C11 1.527(5) C9 C12 1.533(5)