#------------------------------------------------------------------------------ #$Date: 2025-08-20 15:59:05 +0100 (Wed, 20 Aug 2025) $ #$Revision: 301833 $ #$URL: svn://www.crystallography.net/cod/cif/4/11/65/4116521.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/ # # All data on this site have been placed in the public domain by the # contributors. # data_4116521 loop_ _publ_author_name 'Kazumasa Honda' 'Fusae Nakanishi' 'Neil Feeder' _publ_contact_author_address ; National Institute of Materials and Chemical Research Tsukuba, Ibaraki 305-8565 Japan ; _publ_contact_author_email honda@nimc.go.jp _publ_contact_author_fax '(81) 298 54 4627' _publ_contact_author_name 'Dr Kazumasa Honda' _publ_contact_author_phone '(81) 298 54 4625' _publ_section_title ; Kinetic and Mechanistic Study on Single-Crystal-to-Single-Crystal Photodimerization of 2-Benzyl-5-benzylidenecyclopentanone Utilizing X-ray Diffraction ; _journal_name_full 'Journal of the American Chemical Society' _journal_page_first 8246 _journal_page_last 8250 _journal_paper_doi 10.1021/ja991386k _journal_volume 121 _journal_year 1999 _chemical_formula_moiety 'C19 H18 O ' _chemical_formula_sum 'C19 H18 O' _chemical_formula_weight 262.35 _chemical_melting_point 404 _space_group_IT_number 61 _symmetry_cell_setting orthorhombic _symmetry_Int_Tables_number 61 _symmetry_space_group_name_Hall '-P 2ac 2ab' _symmetry_space_group_name_H-M 'P b c a' _audit_creation_date 'Wed Mar 18 20:47:33 1998' _audit_creation_method 'from TEXRAY.INF file' _audit_update_record '98-08-13 updated by K. HONDA' _cell_angle_alpha 90 _cell_angle_beta 90 _cell_angle_gamma 90 _cell_formula_units_Z 8 _cell_length_a 31.263(4) _cell_length_b 10.668(1) _cell_length_c 8.604(4) _cell_measurement_reflns_used 15 _cell_measurement_temperature 175 _cell_measurement_theta_max 13.7 _cell_measurement_theta_min 10.5 _cell_volume 2869.6(14) _computing_cell_refinement 'CAD4 diffractometer control (Enraf-Nonius, 1989)' _computing_data_collection 'CAD4 diffractometer control (Enraf-Nonius, 1989)' _computing_data_reduction 'TEXSAN PROCESS (Molecular Structure Corporation, 1994)' _computing_publication_material 'TEXSAN FINISH (Molecular Structure Corporation, 1998)' _computing_structure_refinement 'TEXSAN LS (Molecular Structure Corporation, 1994)' _computing_structure_solution 'SHELXS86 (Sheldrick, 1985)' _diffrn_ambient_temperature 175 _diffrn_measurement_device_type 'Enraf-Nonius CAD4' _diffrn_measurement_method \w _diffrn_orient_matrix_UB_11 -0.00774 _diffrn_orient_matrix_UB_12 0.08914 _diffrn_orient_matrix_UB_13 0.02261 _diffrn_orient_matrix_UB_21 0.02258 _diffrn_orient_matrix_UB_22 0.00323 _diffrn_orient_matrix_UB_23 0.08226 _diffrn_orient_matrix_UB_31 0.02132 _diffrn_orient_matrix_UB_32 0.02890 _diffrn_orient_matrix_UB_33 -0.07886 _diffrn_radiation_detector 'scintillation counter' _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine focus Enraf-Nonius Mo tube' _diffrn_radiation_type 'Mo K\a' _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.020 _diffrn_reflns_av_sigmaI/netI 0.103 _diffrn_reflns_limit_h_max 36 _diffrn_reflns_limit_h_min 0 _diffrn_reflns_limit_k_max 12 _diffrn_reflns_limit_k_min 0 _diffrn_reflns_limit_l_max 10 _diffrn_reflns_limit_l_min 0 _diffrn_reflns_number 3416 _diffrn_reflns_reduction_process 'Lp corrections applied' _diffrn_reflns_theta_max 25.00 _diffrn_reflns_theta_min 1.00 _diffrn_standards_decay_% -1.4 _diffrn_standards_interval_time 60 _diffrn_standards_number 3 _exptl_absorpt_coefficient_mu 0.073 _exptl_absorpt_correction_T_max 0.993 _exptl_absorpt_correction_T_min 0.965 _exptl_absorpt_correction_type psi-scan _exptl_absorpt_process_details '(North, Phillips & Mathews, 1968)' _exptl_crystal_colour 'clear colourless' _exptl_crystal_density_diffrn 1.214 _exptl_crystal_description plate _exptl_crystal_F_000 1120.00 _exptl_crystal_size_max 0.50 _exptl_crystal_size_mid 0.37 _exptl_crystal_size_min 0.32 _refine_diff_density_max 0.29 _refine_diff_density_min -0.27 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.061 _refine_ls_hydrogen_treatment refall _refine_ls_matrix_type full _refine_ls_number_constraints 0 _refine_ls_number_parameters 253 _refine_ls_number_reflns 1445 _refine_ls_number_restraints 0 _refine_ls_R_factor_all 0.1705 _refine_ls_R_factor_gt 0.0673 _refine_ls_shift/su_max 0.0037 _refine_ls_structure_factor_coef F _refine_ls_weighting_details 'w = 1/[\s^2^(Fo) + 0.00203|Fo|^2^]' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_all 0.0978 _refine_ls_wR_factor_ref 0.0717 _reflns_number_gt 1445 _reflns_number_total 2524 _reflns_observed_criterion >1.0sigma(I) _cod_data_source_file ja991386k_2.cif _cod_data_source_block BBCP@175K _cod_original_cell_volume 2869.6(9) _cod_original_sg_symbol_H-M 'P b c a ' _cod_original_formula_sum 'C19 H18 O ' _cod_database_code 4116521 loop_ _symmetry_equiv_pos_as_xyz x,y,z 1/2+x,1/2-y,-z -x,1/2+y,1/2-z 1/2-x,-y,1/2+z -x,-y,-z 1/2-x,1/2+y,z x,1/2-y,1/2+z 1/2+x,y,1/2-z loop_ _atom_site_label _atom_site_type_symbol _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_occupancy _atom_site_calc_flag O1 O 0.04184(8) 0.2347(3) 0.0113(4) 0.0480(9) Uani 1.00 d C1 C 0.0413(1) 0.3195(4) 0.1057(4) 0.032(1) Uani 1.00 d C2 C 0.0801(1) 0.3750(4) 0.1849(5) 0.033(1) Uani 1.00 d C3 C 0.0650(1) 0.5046(4) 0.2343(6) 0.036(1) Uani 1.00 d C4 C 0.0169(1) 0.4910(4) 0.2668(5) 0.032(1) Uani 1.00 d C5 C 0.0026(1) 0.3833(4) 0.1682(4) 0.027(1) Uani 1.00 d C6 C 0.1215(1) 0.3656(5) 0.0939(5) 0.039(1) Uani 1.00 d C7 C 0.1608(1) 0.3918(4) 0.1923(5) 0.036(1) Uani 1.00 d C8 C 0.1777(1) 0.3002(5) 0.2868(5) 0.045(1) Uani 1.00 d C9 C 0.2129(2) 0.3264(6) 0.3799(6) 0.057(2) Uani 1.00 d C10 C 0.2318(2) 0.4416(6) 0.3755(6) 0.060(2) Uani 1.00 d C11 C 0.2153(1) 0.5329(5) 0.2790(6) 0.055(2) Uani 1.00 d C12 C 0.1798(1) 0.5076(5) 0.1892(5) 0.045(1) Uani 1.00 d C13 C -0.0362(1) 0.3345(4) 0.1397(4) 0.030(1) Uani 1.00 d C14 C -0.0786(1) 0.3697(3) 0.1970(4) 0.030(1) Uani 1.00 d C15 C -0.0854(1) 0.4598(4) 0.3133(5) 0.036(1) Uani 1.00 d C16 C -0.1265(1) 0.4845(4) 0.3665(5) 0.043(1) Uani 1.00 d C17 C -0.1610(1) 0.4221(4) 0.3047(6) 0.047(1) Uani 1.00 d C18 C -0.1549(1) 0.3343(4) 0.1900(6) 0.045(1) Uani 1.00 d C19 C -0.1140(1) 0.3073(4) 0.1381(6) 0.039(1) Uani 1.00 d H1 H 0.084(1) 0.321(3) 0.286(5) 0.04(1) Uiso 1.00 d H2 H 0.082(2) 0.536(4) 0.322(5) 0.06(1) Uiso 1.00 d H3 H 0.069(1) 0.558(4) 0.148(5) 0.06(1) Uiso 1.00 d H4 H 0.001(1) 0.565(3) 0.245(4) 0.026(9) Uiso 1.00 d H5 H 0.013(1) 0.476(3) 0.384(4) 0.024(9) Uiso 1.00 d H6 H 0.122(1) 0.277(4) 0.060(5) 0.04(1) Uiso 1.00 d H7 H 0.120(1) 0.430(4) 0.000(5) 0.06(1) Uiso 1.00 d H8 H 0.167(2) 0.220(5) 0.292(6) 0.07(2) Uiso 1.00 d H9 H 0.226(1) 0.265(5) 0.444(5) 0.07(2) Uiso 1.00 d H10 H 0.255(2) 0.460(4) 0.436(5) 0.07(2) Uiso 1.00 d H11 H 0.231(1) 0.621(5) 0.277(5) 0.08(2) Uiso 1.00 d H12 H 0.171(1) 0.569(3) 0.136(4) 0.03(1) Uiso 1.00 d H13 H -0.038(1) 0.265(3) 0.073(4) 0.04(1) Uiso 1.00 d H14 H -0.0625(10) 0.503(3) 0.357(3) 0.010(8) Uiso 1.00 d H15 H -0.128(2) 0.547(5) 0.446(6) 0.08(2) Uiso 1.00 d H16 H -0.190(1) 0.440(4) 0.344(4) 0.05(1) Uiso 1.00 d H17 H -0.177(1) 0.286(3) 0.143(5) 0.04(1) Uiso 1.00 d H18 H -0.109(1) 0.242(4) 0.053(5) 0.05(1) Uiso 1.00 d loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 O1 0.039(2) 0.050(2) 0.055(2) -0.004(2) 0.006(2) -0.026(2) C1 0.034(2) 0.032(2) 0.028(2) -0.002(2) 0.001(2) -0.004(2) C2 0.030(2) 0.035(2) 0.033(2) 0.003(2) -0.002(2) -0.005(2) C3 0.036(2) 0.036(2) 0.036(3) -0.003(2) 0.000(2) -0.002(2) C4 0.032(2) 0.033(2) 0.030(2) 0.004(2) -0.001(2) -0.003(2) C5 0.033(2) 0.028(2) 0.022(2) 0.005(2) -0.001(2) 0.001(2) C6 0.031(2) 0.048(3) 0.038(2) -0.001(2) -0.004(2) -0.002(3) C7 0.025(2) 0.047(2) 0.037(2) 0.006(2) 0.007(2) -0.003(2) C8 0.040(3) 0.052(3) 0.043(3) 0.011(2) 0.010(2) 0.001(2) C9 0.051(3) 0.078(4) 0.041(3) 0.029(3) 0.000(3) 0.002(3) C10 0.026(2) 0.098(5) 0.055(3) 0.012(3) -0.007(3) -0.025(4) C11 0.031(3) 0.067(3) 0.067(4) -0.006(2) 0.004(2) -0.010(3) C12 0.035(3) 0.054(3) 0.046(3) 0.002(2) -0.002(2) 0.007(3) C13 0.033(2) 0.029(2) 0.029(2) 0.000(2) -0.002(2) -0.003(2) C14 0.033(2) 0.025(2) 0.033(2) 0.004(2) -0.001(2) 0.005(2) C15 0.031(2) 0.042(2) 0.034(2) 0.003(2) -0.003(2) 0.006(2) C16 0.038(3) 0.049(3) 0.041(3) 0.012(2) 0.002(2) 0.006(2) C17 0.028(2) 0.058(3) 0.054(3) 0.011(2) 0.003(2) 0.015(3) C18 0.032(2) 0.042(3) 0.061(3) -0.004(2) -0.005(2) -0.001(3) C19 0.034(2) 0.033(2) 0.051(3) -0.001(2) -0.003(2) 0.006(2) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source O O 0.011 0.006 ;International Tables for Crystallography (1992, Vol. C, Tables 4.2.6.8 and 6.1.1.1) ; C C 0.003 0.002 ;International Tables for Crystallography (1992, Vol. C, Tables 4.2.6.8 and 6.1.1.1) ; H H 0.000 0.000 ;International Tables for Crystallography (1992, Vol. C, Table 6.1.1.2) ; loop_ _diffrn_standard_refln_index_h _diffrn_standard_refln_index_k _diffrn_standard_refln_index_l 20 0 0 -6 -5 -1 -2 7 0 loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_site_symmetry_1 _geom_angle_site_symmetry_2 _geom_angle_site_symmetry_3 _geom_angle_publ_flag O1 C1 C2 125.4(4) 1_555 1_555 1_555 yes O1 C1 C5 126.4(4) 1_555 1_555 1_555 yes C2 C1 C5 108.1(3) 1_555 1_555 1_555 yes C1 C2 C3 103.4(3) 1_555 1_555 1_555 yes C1 C2 C6 115.3(3) 1_555 1_555 1_555 yes C1 C2 H1 104(2) 1_555 1_555 1_555 no C3 C2 C6 118.0(4) 1_555 1_555 1_555 yes C3 C2 H1 107(1) 1_555 1_555 1_555 no C6 C2 H1 107(2) 1_555 1_555 1_555 no C2 C3 C4 105.5(3) 1_555 1_555 1_555 yes C2 C3 H2 110(2) 1_555 1_555 1_555 no C2 C3 H3 106(2) 1_555 1_555 1_555 no C4 C3 H2 115(2) 1_555 1_555 1_555 no C4 C3 H3 109(2) 1_555 1_555 1_555 no H2 C3 H3 108(3) 1_555 1_555 1_555 no C3 C4 C5 105.2(3) 1_555 1_555 1_555 yes C3 C4 H4 113(1) 1_555 1_555 1_555 no C3 C4 H5 107(1) 1_555 1_555 1_555 no C5 C4 H4 111(2) 1_555 1_555 1_555 no C5 C4 H5 113(1) 1_555 1_555 1_555 no H4 C4 H5 105(2) 1_555 1_555 1_555 no C1 C5 C4 108.3(3) 1_555 1_555 1_555 yes C1 C5 C13 119.4(4) 1_555 1_555 1_555 yes C4 C5 C13 132.2(4) 1_555 1_555 1_555 yes C2 C6 C7 113.0(4) 1_555 1_555 1_555 yes C2 C6 H6 103(2) 1_555 1_555 1_555 no C2 C6 H7 107(2) 1_555 1_555 1_555 no C7 C6 H6 108(2) 1_555 1_555 1_555 no C7 C6 H7 110(2) 1_555 1_555 1_555 no H6 C6 H7 113(3) 1_555 1_555 1_555 no C6 C7 C8 120.7(4) 1_555 1_555 1_555 yes C6 C7 C12 120.4(4) 1_555 1_555 1_555 yes C8 C7 C12 118.9(4) 1_555 1_555 1_555 yes C7 C8 C9 120.2(5) 1_555 1_555 1_555 yes C7 C8 H8 122(3) 1_555 1_555 1_555 no C9 C8 H8 117(3) 1_555 1_555 1_555 no C8 C9 C10 120.6(5) 1_555 1_555 1_555 yes C8 C9 H9 122(2) 1_555 1_555 1_555 no C10 C9 H9 116(2) 1_555 1_555 1_555 no C9 C10 C11 119.4(5) 1_555 1_555 1_555 yes C9 C10 H10 121(2) 1_555 1_555 1_555 no C11 C10 H10 119(2) 1_555 1_555 1_555 no C10 C11 C12 120.0(5) 1_555 1_555 1_555 yes C10 C11 H11 117(2) 1_555 1_555 1_555 no C12 C11 H11 122(2) 1_555 1_555 1_555 no C7 C12 C11 120.9(5) 1_555 1_555 1_555 yes C7 C12 H12 124(2) 1_555 1_555 1_555 no C11 C12 H12 114(2) 1_555 1_555 1_555 no C5 C13 C14 131.1(4) 1_555 1_555 1_555 yes C5 C13 H13 118(2) 1_555 1_555 1_555 no C14 C13 H13 110(2) 1_555 1_555 1_555 no C13 C14 C15 123.5(4) 1_555 1_555 1_555 yes C13 C14 C19 118.5(4) 1_555 1_555 1_555 yes C15 C14 C19 117.9(4) 1_555 1_555 1_555 yes C14 C15 C16 120.3(4) 1_555 1_555 1_555 yes C14 C15 H14 120(1) 1_555 1_555 1_555 no C16 C15 H14 118(1) 1_555 1_555 1_555 no C15 C16 C17 120.5(5) 1_555 1_555 1_555 yes C15 C16 H15 114(2) 1_555 1_555 1_555 no C17 C16 H15 125(2) 1_555 1_555 1_555 no C16 C17 C18 119.9(4) 1_555 1_555 1_555 yes C16 C17 H16 119(2) 1_555 1_555 1_555 no C18 C17 H16 120(2) 1_555 1_555 1_555 no C17 C18 C19 120.1(4) 1_555 1_555 1_555 yes C17 C18 H17 124(2) 1_555 1_555 1_555 no C19 C18 H17 115(2) 1_555 1_555 1_555 no C14 C19 C18 121.3(4) 1_555 1_555 1_555 yes C14 C19 H18 116(2) 1_555 1_555 1_555 no C18 C19 H18 121(2) 1_555 1_555 1_555 no loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance _geom_bond_site_symmetry_1 _geom_bond_site_symmetry_2 _geom_bond_publ_flag O1 C1 1.216(4) 1_555 1_555 yes C1 C2 1.513(5) 1_555 1_555 yes C1 C5 1.489(5) 1_555 1_555 yes C2 C3 1.522(5) 1_555 1_555 yes C2 C6 1.516(5) 1_555 1_555 yes C3 C4 1.539(6) 1_555 1_555 yes C4 C5 1.495(5) 1_555 1_555 yes C5 C13 1.342(5) 1_555 1_555 yes C6 C7 1.516(6) 1_555 1_555 yes C7 C8 1.377(6) 1_555 1_555 yes C7 C12 1.372(6) 1_555 1_555 yes C8 C9 1.388(7) 1_555 1_555 yes C9 C10 1.364(7) 1_555 1_555 yes C10 C11 1.380(8) 1_555 1_555 yes C11 C12 1.379(6) 1_555 1_555 yes C13 C14 1.463(5) 1_555 1_555 yes C14 C15 1.404(6) 1_555 1_555 yes C14 C19 1.388(5) 1_555 1_555 yes C15 C16 1.388(6) 1_555 1_555 yes C16 C17 1.375(6) 1_555 1_555 yes C17 C18 1.374(6) 1_555 1_555 yes C18 C19 1.384(6) 1_555 1_555 yes loop_ _geom_contact_atom_site_label_1 _geom_contact_atom_site_label_2 _geom_contact_distance _geom_contact_site_symmetry_1 _geom_contact_site_symmetry_2 _geom_contact_publ_flag C5 C14 2.554(5) 1_555 1_555 no C5 C15 3.129(6) 1_555 1_555 no loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion _geom_torsion_site_symmetry_1 _geom_torsion_site_symmetry_2 _geom_torsion_site_symmetry_3 _geom_torsion_site_symmetry_4 _geom_torsion_publ_flag O1 C1 C2 C3 157.6(4) 1_555 1_555 1_555 1_555 no O1 C1 C2 C6 27.3(6) 1_555 1_555 1_555 1_555 no O1 C1 C5 C4 -173.7(4) 1_555 1_555 1_555 1_555 no O1 C1 C5 C13 10.8(6) 1_555 1_555 1_555 1_555 no C1 C2 C3 C4 31.0(4) 1_555 1_555 1_555 1_555 no C1 C2 C6 C7 -165.5(4) 1_555 1_555 1_555 1_555 no C1 C5 C4 C3 11.0(4) 1_555 1_555 1_555 1_555 no C1 C5 C13 C14 173.7(4) 1_555 1_555 1_555 1_555 no C2 C1 C5 C4 8.6(4) 1_555 1_555 1_555 1_555 no C2 C1 C5 C13 -166.9(4) 1_555 1_555 1_555 1_555 no C2 C3 C4 C5 -26.3(4) 1_555 1_555 1_555 1_555 no C2 C6 C7 C8 80.6(5) 1_555 1_555 1_555 1_555 no C2 C6 C7 C12 -98.9(5) 1_555 1_555 1_555 1_555 no C3 C2 C1 C5 -24.6(4) 1_555 1_555 1_555 1_555 no C3 C2 C6 C7 71.7(5) 1_555 1_555 1_555 1_555 no C3 C4 C5 C13 -174.3(4) 1_555 1_555 1_555 1_555 no C4 C3 C2 C6 159.6(4) 1_555 1_555 1_555 1_555 no C4 C5 C13 C14 -0.6(7) 1_555 1_555 1_555 1_555 no C5 C1 C2 C6 -154.9(4) 1_555 1_555 1_555 1_555 no C5 C13 C14 C15 -7.4(7) 1_555 1_555 1_555 1_555 no C5 C13 C14 C19 175.3(4) 1_555 1_555 1_555 1_555 no C6 C7 C8 C9 -178.1(4) 1_555 1_555 1_555 1_555 no C6 C7 C12 C11 179.5(4) 1_555 1_555 1_555 1_555 no C7 C8 C9 C10 -1.9(7) 1_555 1_555 1_555 1_555 no C7 C12 C11 C10 -0.9(7) 1_555 1_555 1_555 1_555 no C8 C7 C12 C11 -0.1(7) 1_555 1_555 1_555 1_555 no C8 C9 C10 C11 0.8(7) 1_555 1_555 1_555 1_555 no C9 C8 C7 C12 1.5(6) 1_555 1_555 1_555 1_555 no C9 C10 C11 C12 0.6(7) 1_555 1_555 1_555 1_555 no C13 C14 C15 C16 -177.2(4) 1_555 1_555 1_555 1_555 no C13 C14 C19 C18 178.6(4) 1_555 1_555 1_555 1_555 no C14 C15 C16 C17 -0.8(6) 1_555 1_555 1_555 1_555 no C14 C19 C18 C17 -1.6(7) 1_555 1_555 1_555 1_555 no C15 C14 C19 C18 1.1(6) 1_555 1_555 1_555 1_555 no C15 C16 C17 C18 0.3(7) 1_555 1_555 1_555 1_555 no C16 C15 C14 C19 0.1(6) 1_555 1_555 1_555 1_555 no C16 C17 C18 C19 0.9(7) 1_555 1_555 1_555 1_555 no loop_ _cod_related_entry_id _cod_related_entry_database _cod_related_entry_code 1 PubChem 92235248