#------------------------------------------------------------------------------ #$Date: 2010-06-06 12:37:57 +0100 (Sun, 06 Jun 2010) $ #$Revision: 1194 $ #$URL: svn://www.crystallography.net/cod/cif/4/4308245.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/ # # All data on this site have been placed in the public domain by the # contributors. # data_4308245 loop_ _publ_author_name 'Xiang-Ping Li' 'Jian-Yong Zhang' 'Mei Pan' 'Sheng-Run Zheng' 'Yu Liu' 'Cheng-Yong Su' _publ_section_title ; Zero to Three Dimensional Increase of Silver(I) Coordination Assemblies Controlled by Deprotonation of 1,3,5-Tri(2-benzimidazolyl)benzene and Aggregation of Multinuclear Building Units ; _journal_name_full 'Inorganic Chemistry' _journal_page_first 4617 _journal_page_last 4625 _journal_volume 46 _journal_year 2007 _chemical_formula_sum 'C56 H36 Ag2 F6 N12 O6 S2' _chemical_formula_weight 1366.83 _chemical_name_systematic ; ? ; _space_group_IT_number 2 _symmetry_cell_setting Triclinic _symmetry_space_group_name_Hall '-P 1' _symmetry_space_group_name_H-M 'P -1' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL-97 _cell_angle_alpha 87.87(3) _cell_angle_beta 85.77(3) _cell_angle_gamma 83.79(3) _cell_formula_units_Z 1 _cell_length_a 9.4460(19) _cell_length_b 11.592(2) _cell_length_c 12.042(2) _cell_measurement_reflns_used 25 _cell_measurement_temperature 293(2) _cell_measurement_theta_max 15 _cell_measurement_theta_min 8 _cell_volume 1306.7(4) _computing_cell_refinement 'CAD4 Express (Enraf Nonius, 1994)' _computing_data_collection 'CAD4 Express (Enraf Nonius, 1994)' _computing_data_reduction 'XCAD4 (Harms & Wocadlo, 1995)' _computing_structure_refinement 'SHELXL-97 (Sheldrick, 1997)' _computing_structure_solution 'SHELXS-97 (Sheldrick, 1990)' _diffrn_ambient_temperature 293(2) _diffrn_measured_fraction_theta_full 0.999 _diffrn_measured_fraction_theta_max 0.999 _diffrn_measurement_device_type 'Enraf Nonius FR590' _diffrn_measurement_method '\w scan' _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'Enraf Nonius FR590' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0236 _diffrn_reflns_av_sigmaI/netI 0.0335 _diffrn_reflns_limit_h_max 11 _diffrn_reflns_limit_h_min 0 _diffrn_reflns_limit_k_max 14 _diffrn_reflns_limit_k_min -14 _diffrn_reflns_limit_l_max 14 _diffrn_reflns_limit_l_min -14 _diffrn_reflns_number 5456 _diffrn_reflns_theta_full 25.97 _diffrn_reflns_theta_max 25.97 _diffrn_reflns_theta_min 2.17 _diffrn_standards_interval_count 400 _diffrn_standards_interval_time 3600 _diffrn_standards_number 2 _exptl_absorpt_coefficient_mu 0.918 _exptl_absorpt_correction_type none _exptl_crystal_colour Colorless _exptl_crystal_density_diffrn 1.737 _exptl_crystal_density_method 'not measured' _exptl_crystal_description Block _exptl_crystal_F_000 684 _exptl_crystal_size_max 0.40 _exptl_crystal_size_mid 0.30 _exptl_crystal_size_min 0.25 _refine_diff_density_max 0.740 _refine_diff_density_min -1.031 _refine_diff_density_rms 0.128 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.016 _refine_ls_hydrogen_treatment mixed _refine_ls_matrix_type full _refine_ls_number_parameters 391 _refine_ls_number_reflns 5128 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.016 _refine_ls_R_factor_all 0.0657 _refine_ls_R_factor_gt 0.0489 _refine_ls_shift/su_max <0.001 _refine_ls_shift/su_mean <0.001 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.0733P)^2^+2.5882P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.1258 _refine_ls_wR_factor_ref 0.1364 _reflns_number_gt 4162 _reflns_number_total 5128 _reflns_threshold_expression >2sigma(I) _[local]_cod_data_source_file ic070309k-file003_1.cif _[local]_cod_data_source_block p-1 _cod_original_cell_volume 1306.7(5) _cod_database_code 4308245 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, -y, -z' loop_ _atom_site_label _atom_site_type_symbol _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_occupancy _atom_site_symmetry_multiplicity _atom_site_calc_flag _atom_site_refinement_flags _atom_site_disorder_assembly _atom_site_disorder_group Ag1 Ag 0.15686(4) 0.29167(3) 0.47424(3) 0.04449(15) Uani 1 1 d . . . N1 N -0.4374(4) -0.0642(3) 0.3443(3) 0.0341(9) Uani 1 1 d . . . N2 N -0.3356(4) -0.1967(3) 0.4563(3) 0.0376(9) Uani 1 1 d . . . N3 N -0.0536(5) -0.0755(4) 0.7727(3) 0.0402(9) Uani 1 1 d . . . N4 N 0.0514(4) 0.0879(3) 0.7451(3) 0.0400(9) Uani 1 1 d . . . N5 N -0.0375(4) 0.3556(3) 0.4053(3) 0.0366(9) Uani 1 1 d . . . N6 N -0.2369(5) 0.3494(3) 0.3242(4) 0.0415(10) Uani 1 1 d . . . C1 C -0.2676(4) 0.0032(4) 0.4696(4) 0.0323(9) Uani 1 1 d . . . C2 C -0.2057(5) -0.0216(4) 0.5699(4) 0.0337(9) Uani 1 1 d . . . H2A H -0.2190 -0.0912 0.6083 0.040 Uiso 1 1 calc R . . C3 C -0.1243(5) 0.0559(4) 0.6136(4) 0.0336(9) Uani 1 1 d . . . C4 C -0.1121(5) 0.1623(4) 0.5590(4) 0.0355(10) Uani 1 1 d . . . H4A H -0.0610 0.2162 0.5893 0.043 Uiso 1 1 calc R . . C5 C -0.1751(5) 0.1889(4) 0.4598(4) 0.0341(10) Uani 1 1 d . . . C6 C -0.2536(5) 0.1095(4) 0.4149(4) 0.0337(10) Uani 1 1 d . . . H6A H -0.2966 0.1275 0.3485 0.040 Uiso 1 1 calc R . . C7 C -0.3452(4) -0.0857(4) 0.4234(4) 0.0307(9) Uani 1 1 d . . . C8 C -0.4909(5) -0.1661(4) 0.3227(4) 0.0315(9) Uani 1 1 d . . . C9 C -0.5872(5) -0.1941(4) 0.2487(4) 0.0418(11) Uani 1 1 d . . . H9A H -0.6286 -0.1389 0.1995 0.050 Uiso 1 1 calc R . . C10 C -0.6183(6) -0.3068(5) 0.2519(5) 0.0535(14) Uani 1 1 d . . . H10A H -0.6802 -0.3289 0.2019 0.064 Uiso 1 1 calc R . . C11 C -0.5606(6) -0.3894(5) 0.3274(5) 0.0532(14) Uani 1 1 d . . . H11A H -0.5879 -0.4642 0.3291 0.064 Uiso 1 1 calc R . . C12 C -0.4641(6) -0.3623(4) 0.3993(5) 0.0469(12) Uani 1 1 d . . . H12A H -0.4236 -0.4178 0.4486 0.056 Uiso 1 1 calc R . . C13 C -0.4291(5) -0.2492(4) 0.3958(4) 0.0367(10) Uani 1 1 d . . . C14 C -0.0452(5) 0.0260(4) 0.7127(4) 0.0341(9) Uani 1 1 d . . . C15 C 0.0452(5) -0.0788(4) 0.8505(4) 0.0419(11) Uani 1 1 d . . . C16 C 0.0849(6) -0.1610(5) 0.9326(4) 0.0531(13) Uani 1 1 d . . . H16A H 0.0415 -0.2292 0.9436 0.064 Uiso 1 1 calc R . . C17 C 0.1913(7) -0.1361(6) 0.9963(5) 0.0648(17) Uani 1 1 d . . . H17A H 0.2202 -0.1882 1.0529 0.078 Uiso 1 1 calc R . . C18 C 0.2582(6) -0.0332(6) 0.9781(5) 0.0616(16) Uani 1 1 d . . . H18A H 0.3305 -0.0196 1.0228 0.074 Uiso 1 1 calc R . . C19 C 0.2199(6) 0.0466(5) 0.8971(5) 0.0532(13) Uani 1 1 d . . . H19A H 0.2643 0.1143 0.8858 0.064 Uiso 1 1 calc R . . C20 C 0.1107(5) 0.0225(4) 0.8313(4) 0.0410(11) Uani 1 1 d . . . C21 C -0.1505(5) 0.2984(4) 0.3992(4) 0.0349(10) Uani 1 1 d . . . C22 C -0.0532(5) 0.4498(4) 0.3315(4) 0.0390(11) Uani 1 1 d . . . C23 C 0.0347(6) 0.5378(4) 0.3042(5) 0.0523(14) Uani 1 1 d . . . H23A H 0.1193 0.5406 0.3384 0.063 Uiso 1 1 calc R . . C24 C -0.0079(7) 0.6194(5) 0.2257(6) 0.0662(17) Uani 1 1 d . . . H24A H 0.0476 0.6798 0.2072 0.079 Uiso 1 1 calc R . . C25 C -0.1324(7) 0.6141(5) 0.1729(6) 0.0689(19) Uani 1 1 d . . . H25A H -0.1575 0.6708 0.1191 0.083 Uiso 1 1 calc R . . C26 C -0.2198(6) 0.5282(5) 0.1970(5) 0.0587(16) Uani 1 1 d . . . H26A H -0.3026 0.5250 0.1604 0.070 Uiso 1 1 calc R . . C27 C -0.1789(5) 0.4459(4) 0.2791(4) 0.0427(11) Uani 1 1 d . . . C28 C -0.5770(8) 0.3208(6) 0.0905(5) 0.0645(17) Uani 1 1 d . . . S1 S -0.59807(13) 0.25025(10) 0.22640(10) 0.0380(3) Uani 1 1 d . . . O1 O -0.7499(4) 0.2551(4) 0.2474(4) 0.0633(11) Uani 1 1 d . . . O2 O -0.5320(5) 0.3208(4) 0.2974(4) 0.0671(12) Uani 1 1 d . . . O3 O -0.5286(6) 0.1360(4) 0.2131(4) 0.0785(14) Uani 1 1 d . . . F1 F -0.4400(5) 0.3379(5) 0.0656(4) 0.1148(18) Uani 1 1 d . . . F2 F -0.6138(7) 0.2610(5) 0.0127(3) 0.123(2) Uani 1 1 d . . . F3 F -0.6452(6) 0.4241(4) 0.0880(4) 0.1075(17) Uani 1 1 d . . . H3 H -0.109(5) -0.121(4) 0.763(4) 0.030(13) Uiso 1 1 d . . . H6 H -0.311(6) 0.328(5) 0.315(4) 0.043(15) Uiso 1 1 d . . . H1 H -0.458(6) -0.007(5) 0.318(5) 0.051(18) Uiso 1 1 d . . . loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_23 _atom_site_aniso_U_13 _atom_site_aniso_U_12 Ag1 0.0398(2) 0.0351(2) 0.0618(3) 0.00907(16) -0.02828(18) -0.00538(15) N1 0.034(2) 0.0291(19) 0.041(2) 0.0052(17) -0.0179(17) -0.0048(16) N2 0.038(2) 0.0310(19) 0.047(2) 0.0069(17) -0.0227(18) -0.0091(16) N3 0.041(2) 0.043(2) 0.039(2) 0.0044(18) -0.0149(18) -0.0128(19) N4 0.043(2) 0.039(2) 0.041(2) -0.0010(17) -0.0170(18) -0.0086(17) N5 0.036(2) 0.0300(18) 0.045(2) 0.0066(16) -0.0169(17) -0.0060(15) N6 0.034(2) 0.038(2) 0.056(3) 0.0109(18) -0.0234(19) -0.0119(17) C1 0.028(2) 0.031(2) 0.039(2) 0.0011(18) -0.0124(18) -0.0046(17) C2 0.035(2) 0.029(2) 0.039(2) 0.0033(18) -0.0089(19) -0.0071(17) C3 0.033(2) 0.034(2) 0.035(2) -0.0019(18) -0.0109(19) -0.0021(18) C4 0.038(2) 0.031(2) 0.040(3) -0.0028(19) -0.012(2) -0.0068(18) C5 0.033(2) 0.031(2) 0.040(3) 0.0032(18) -0.0116(19) -0.0038(17) C6 0.032(2) 0.031(2) 0.040(3) 0.0032(18) -0.0148(19) -0.0021(17) C7 0.030(2) 0.030(2) 0.034(2) 0.0045(17) -0.0092(18) -0.0068(17) C8 0.030(2) 0.033(2) 0.033(2) 0.0013(18) -0.0078(18) -0.0043(17) C9 0.041(3) 0.048(3) 0.038(3) -0.002(2) -0.017(2) -0.005(2) C10 0.053(3) 0.054(3) 0.059(3) -0.008(3) -0.027(3) -0.018(3) C11 0.052(3) 0.039(3) 0.074(4) -0.006(3) -0.021(3) -0.018(2) C12 0.053(3) 0.035(2) 0.057(3) 0.006(2) -0.022(3) -0.011(2) C13 0.034(2) 0.035(2) 0.044(3) 0.0015(19) -0.019(2) -0.0066(18) C14 0.037(2) 0.034(2) 0.033(2) 0.0017(18) -0.0084(19) -0.0045(18) C15 0.038(3) 0.052(3) 0.035(3) 0.002(2) -0.011(2) -0.002(2) C16 0.053(3) 0.061(3) 0.046(3) 0.015(3) -0.011(2) -0.008(3) C17 0.060(4) 0.089(5) 0.042(3) 0.013(3) -0.019(3) 0.011(3) C18 0.050(3) 0.089(5) 0.048(3) -0.004(3) -0.026(3) 0.001(3) C19 0.045(3) 0.067(4) 0.051(3) -0.008(3) -0.017(2) -0.011(3) C20 0.041(3) 0.050(3) 0.033(2) -0.006(2) -0.013(2) -0.003(2) C21 0.037(2) 0.027(2) 0.042(3) 0.0036(18) -0.016(2) -0.0046(18) C22 0.038(2) 0.028(2) 0.052(3) 0.005(2) -0.017(2) -0.0025(18) C23 0.046(3) 0.042(3) 0.072(4) 0.015(3) -0.024(3) -0.014(2) C24 0.070(4) 0.044(3) 0.088(5) 0.023(3) -0.030(3) -0.015(3) C25 0.060(4) 0.060(4) 0.088(5) 0.043(3) -0.023(3) -0.011(3) C26 0.049(3) 0.058(3) 0.072(4) 0.030(3) -0.026(3) -0.012(3) C27 0.038(3) 0.037(2) 0.056(3) 0.009(2) -0.020(2) -0.007(2) C28 0.077(4) 0.061(4) 0.055(4) 0.018(3) -0.010(3) -0.004(3) S1 0.0389(6) 0.0343(6) 0.0425(7) 0.0077(5) -0.0153(5) -0.0057(5) O1 0.046(2) 0.071(3) 0.075(3) 0.015(2) -0.014(2) -0.0208(19) O2 0.068(3) 0.076(3) 0.065(3) 0.001(2) -0.028(2) -0.027(2) O3 0.107(4) 0.051(2) 0.073(3) 0.014(2) -0.018(3) 0.018(2) F1 0.089(3) 0.148(5) 0.103(4) 0.043(3) 0.023(3) -0.028(3) F2 0.204(6) 0.128(4) 0.047(2) 0.004(2) -0.043(3) -0.043(4) F3 0.138(4) 0.071(3) 0.104(3) 0.049(2) -0.012(3) 0.019(3) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Ag Ag -0.8971 1.1015 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' F F 0.0171 0.0103 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' S S 0.1246 0.1234 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_site_symmetry_1 _geom_angle_site_symmetry_3 _geom_angle_publ_flag N5 Ag1 N2 169.11(13) . 2_556 ? C7 N1 C8 108.5(4) . . ? C7 N2 C13 106.6(4) . . ? C7 N2 Ag1 125.9(3) . 2_556 ? C13 N2 Ag1 122.3(3) . 2_556 ? C14 N3 C15 106.6(4) . . ? C14 N4 C20 104.2(4) . . ? C21 N5 C22 106.7(4) . . ? C21 N5 Ag1 126.5(3) . . ? C22 N5 Ag1 124.5(3) . . ? C21 N6 C27 108.6(4) . . ? C2 C1 C6 119.6(4) . . ? C2 C1 C7 118.5(4) . . ? C6 C1 C7 121.9(4) . . ? C3 C2 C1 120.8(4) . . ? C2 C3 C4 119.1(4) . . ? C2 C3 C14 121.6(4) . . ? C4 C3 C14 119.2(4) . . ? C5 C4 C3 120.6(4) . . ? C4 C5 C6 120.0(4) . . ? C4 C5 C21 119.3(4) . . ? C6 C5 C21 120.6(4) . . ? C5 C6 C1 119.8(4) . . ? N2 C7 N1 111.0(4) . . ? N2 C7 C1 124.8(4) . . ? N1 C7 C1 124.2(4) . . ? N1 C8 C9 132.9(4) . . ? N1 C8 C13 105.7(4) . . ? C9 C8 C13 121.4(4) . . ? C10 C9 C8 116.7(5) . . ? C9 C10 C11 122.2(5) . . ? C12 C11 C10 121.1(5) . . ? C11 C12 C13 117.5(5) . . ? C12 C13 N2 130.8(4) . . ? C12 C13 C8 121.1(4) . . ? N2 C13 C8 108.1(4) . . ? N4 C14 N3 113.4(4) . . ? N4 C14 C3 123.2(4) . . ? N3 C14 C3 123.0(4) . . ? N3 C15 C20 105.3(4) . . ? N3 C15 C16 132.1(5) . . ? C20 C15 C16 122.6(5) . . ? C17 C16 C15 116.4(6) . . ? C16 C17 C18 121.6(5) . . ? C19 C18 C17 121.9(5) . . ? C18 C19 C20 117.2(6) . . ? N4 C20 C15 110.6(4) . . ? N4 C20 C19 129.1(5) . . ? C15 C20 C19 120.3(5) . . ? N5 C21 N6 110.8(4) . . ? N5 C21 C5 125.4(4) . . ? N6 C21 C5 123.7(4) . . ? N5 C22 C27 108.5(4) . . ? N5 C22 C23 130.9(4) . . ? C27 C22 C23 120.7(4) . . ? C24 C23 C22 117.7(5) . . ? C23 C24 C25 121.2(5) . . ? C26 C25 C24 122.4(5) . . ? C25 C26 C27 116.8(5) . . ? N6 C27 C22 105.4(4) . . ? N6 C27 C26 133.4(5) . . ? C22 C27 C26 121.2(5) . . ? F2 C28 F3 110.1(6) . . ? F2 C28 F1 106.7(6) . . ? F3 C28 F1 104.5(6) . . ? F2 C28 S1 112.8(5) . . ? F3 C28 S1 111.8(5) . . ? F1 C28 S1 110.4(5) . . ? O3 S1 O2 114.9(3) . . ? O3 S1 O1 114.1(3) . . ? O2 S1 O1 113.8(3) . . ? O3 S1 C28 105.0(3) . . ? O2 S1 C28 103.9(3) . . ? O1 S1 C28 103.3(3) . . ? loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance _geom_bond_site_symmetry_2 _geom_bond_publ_flag Ag1 N5 2.120(4) . ? Ag1 N2 2.122(4) 2_556 ? N1 C7 1.336(6) . ? N1 C8 1.375(6) . ? N2 C7 1.328(5) . ? N2 C13 1.387(5) . ? N2 Ag1 2.122(4) 2_556 ? N3 C14 1.364(6) . ? N3 C15 1.368(6) . ? N4 C14 1.310(6) . ? N4 C20 1.379(6) . ? N5 C21 1.325(6) . ? N5 C22 1.384(6) . ? N6 C21 1.340(6) . ? N6 C27 1.375(6) . ? C1 C2 1.387(6) . ? C1 C6 1.391(6) . ? C1 C7 1.474(6) . ? C2 C3 1.386(6) . ? C3 C4 1.388(6) . ? C3 C14 1.465(6) . ? C4 C5 1.384(6) . ? C5 C6 1.390(6) . ? C5 C21 1.471(6) . ? C8 C9 1.390(6) . ? C8 C13 1.391(6) . ? C9 C10 1.368(7) . ? C10 C11 1.392(8) . ? C11 C12 1.370(7) . ? C12 C13 1.385(6) . ? C15 C20 1.389(7) . ? C15 C16 1.390(7) . ? C16 C17 1.369(8) . ? C17 C18 1.412(10) . ? C18 C19 1.360(8) . ? C19 C20 1.404(7) . ? C22 C27 1.390(6) . ? C22 C23 1.399(7) . ? C23 C24 1.363(7) . ? C24 C25 1.385(9) . ? C25 C26 1.371(8) . ? C26 C27 1.394(7) . ? C28 F2 1.275(8) . ? C28 F3 1.297(7) . ? C28 F1 1.341(8) . ? C28 S1 1.810(6) . ? S1 O3 1.422(4) . ? S1 O2 1.425(4) . ? S1 O1 1.434(4) . ? loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA _geom_hbond_site_symmetry_A N3 H3 O1 0.80(5) 2.17(5) 2.963(6) 173(5) 2_456 N6 H6 O2 0.79(6) 2.12(6) 2.885(6) 163(5) . N1 H1 O3 0.74(6) 2.13(6) 2.849(6) 167(6) .