#------------------------------------------------------------------------------ #$Date: 2018-09-01 00:18:24 +0100 (Sat, 01 Sep 2018) $ #$Revision: 210276 $ #$URL: svn://www.crystallography.net/cod/cif/4/30/83/4308395.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/ # # All data on this site have been placed in the public domain by the # contributors. # data_4308395 loop_ _publ_author_name 'Bacchi, Alessia' 'Bosetti, Elsa' 'Carcelli, Mauro' 'Pelagatti, Paolo' 'Rogolino, Dominga' 'Pelizzi, Giancarlo' _publ_section_title ; "Venetian Blinds" Mechanism of Solvation/Desolvation in Palladium(II) Wheel-and-Axle Organic--Inorganic Diols ; _journal_coden_ASTM INOCAJ _journal_issue 2 _journal_name_full 'Inorganic Chemistry' _journal_page_first 431 _journal_page_last 442 _journal_paper_doi 10.1021/ic048896m _journal_volume 44 _journal_year 2005 _chemical_formula_sum 'C44 H46 Cl2 N2 O4 Pd' _chemical_formula_weight 844.13 _space_group_IT_number 2 _symmetry_cell_setting tericlinic _symmetry_space_group_name_Hall '-P 1' _symmetry_space_group_name_H-M 'P -1' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL-97 _cell_angle_alpha 100.534(2) _cell_angle_beta 96.889(2) _cell_angle_gamma 98.944(2) _cell_formula_units_Z 1 _cell_length_a 7.9754(7) _cell_length_b 11.2200(10) _cell_length_c 11.5430(10) _cell_measurement_temperature 293(2) _cell_volume 991.38(15) _computing_cell_refinement ; SAINT: SAX, Area Detector Integration, Siemens Analytical instruments INC., Madison, Wisconsin, USA. ; _computing_data_collection ; SAINT: SAX, Area Detector Integration, Siemens Analytical instruments INC., Madison, Wisconsin, USA. ; _computing_data_reduction ; SAINT: SAX, Area Detector Integration, Siemens Analytical instruments INC., Madison, Wisconsin, USA. SADABS: Siemens Area Detector Absorption Correction Software, Sheldrick G., 1996, University of Goettingen, Germany. ; _computing_molecular_graphics 'Ortep-3 for Windows (Farrugia, 1997)' _computing_publication_material 'PARST - M. Nardelli, J. Appl. Crystallogr. 1995, 28, 659' _computing_structure_refinement 'SHELXL-97 (Sheldrick, 1997)' _computing_structure_solution 'SIR97 (Altomare et al., 1997)' _diffrn_ambient_temperature 293(2) _diffrn_detector_area_resol_mean 8.2 _diffrn_measured_fraction_theta_full 0.898 _diffrn_measured_fraction_theta_max 0.898 _diffrn_measurement_device_type 'Bruker AXS CCD diffractometer' _diffrn_measurement_method '\w scan' _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71069 _diffrn_reflns_av_R_equivalents 0.0174 _diffrn_reflns_av_sigmaI/netI 0.0153 _diffrn_reflns_limit_h_max 10 _diffrn_reflns_limit_h_min -11 _diffrn_reflns_limit_k_max 15 _diffrn_reflns_limit_k_min -15 _diffrn_reflns_limit_l_max 15 _diffrn_reflns_limit_l_min -16 _diffrn_reflns_number 13589 _diffrn_reflns_theta_full 30.19 _diffrn_reflns_theta_max 30.19 _diffrn_reflns_theta_min 1.82 _exptl_absorpt_coefficient_mu 0.648 _exptl_absorpt_correction_T_max 1.00 _exptl_absorpt_correction_T_min 0.774150 _exptl_absorpt_correction_type 'symmetry related measurements' _exptl_absorpt_process_details 'as implemented in SAINT+/SADABS package' _exptl_crystal_colour yellow _exptl_crystal_density_diffrn 1.414 _exptl_crystal_density_method 'not measured' _exptl_crystal_description prism _exptl_crystal_F_000 436 _exptl_crystal_size_max 0.20 _exptl_crystal_size_mid 0.09 _exptl_crystal_size_min 0.03 _refine_diff_density_max 0.326 _refine_diff_density_min -0.615 _refine_diff_density_rms 0.053 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.078 _refine_ls_hydrogen_treatment mixed _refine_ls_matrix_type full _refine_ls_number_parameters 301 _refine_ls_number_reflns 5280 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.078 _refine_ls_R_factor_all 0.0275 _refine_ls_R_factor_gt 0.0250 _refine_ls_shift/su_max 0.001 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.0413P)^2^+0.2164P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.0684 _refine_ls_wR_factor_ref 0.0711 _reflns_number_gt 5009 _reflns_number_total 5280 _reflns_threshold_expression >2sigma(I) _cod_data_source_file ic048896msi20040811_044420_04.cif _cod_data_source_block 5 _cod_database_code 4308395 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, -y, -z' loop_ _atom_site_label _atom_site_type_symbol _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_occupancy _atom_site_symmetry_multiplicity _atom_site_calc_flag _atom_site_refinement_flags _atom_site_disorder_assembly _atom_site_disorder_group Pd1 Pd 0.0000 0.0000 0.0000 0.03329(6) Uani 1 2 d S . . Cl1 Cl 0.11693(5) -0.03146(4) -0.17301(4) 0.04743(9) Uani 1 1 d . . . N1 N -0.15586(15) 0.10095(11) -0.07492(11) 0.0348(2) Uani 1 1 d . . . O1 O -0.63901(15) 0.30133(12) -0.18098(11) 0.0450(3) Uani 1 1 d . . . C1 C -0.49998(18) 0.30022(13) -0.24795(12) 0.0348(3) Uani 1 1 d . . . C2 C -0.37496(18) 0.23345(13) -0.18379(12) 0.0336(3) Uani 1 1 d . . . C3 C -0.43889(19) 0.13791(15) -0.13091(15) 0.0420(3) Uani 1 1 d . . . C4 C -0.32619(19) 0.07548(15) -0.07684(15) 0.0424(3) Uani 1 1 d . . . C5 C -0.09368(19) 0.19212(14) -0.12743(14) 0.0388(3) Uani 1 1 d . . . C6 C -0.19890(19) 0.25991(14) -0.18116(14) 0.0390(3) Uani 1 1 d . . . C7 C -0.41782(18) 0.43443(13) -0.24395(12) 0.0346(3) Uani 1 1 d . . . C8 C -0.3739(2) 0.51370(16) -0.13264(14) 0.0463(3) Uani 1 1 d . . . C9 C -0.3060(3) 0.63695(18) -0.12111(17) 0.0552(4) Uani 1 1 d . . . C10 C -0.2791(3) 0.68429(16) -0.22141(19) 0.0542(4) Uani 1 1 d . . . C11 C -0.3236(3) 0.60752(16) -0.33219(17) 0.0509(4) Uani 1 1 d . . . C12 C -0.3932(2) 0.48350(14) -0.34405(14) 0.0419(3) Uani 1 1 d . . . C13 C -0.5609(2) 0.22354(13) -0.37484(14) 0.0404(3) Uani 1 1 d . . . C14 C -0.7350(3) 0.17877(19) -0.41438(19) 0.0575(5) Uani 1 1 d . . . C15 C -0.7903(4) 0.1101(2) -0.5303(2) 0.0751(7) Uani 1 1 d . . . C16 C -0.6747(4) 0.08441(19) -0.6049(2) 0.0735(7) Uani 1 1 d . . . C17 C -0.5022(4) 0.12618(19) -0.56689(18) 0.0658(6) Uani 1 1 d . . . C18 C -0.4450(3) 0.19572(16) -0.45169(16) 0.0501(4) Uani 1 1 d . . . O100 O -0.8668(2) 0.44799(15) -0.24411(14) 0.0635(4) Uani 1 1 d . . . C100 C -0.7807(5) 0.6577(3) -0.2033(5) 0.1369(19) Uani 1 1 d . . . H10I H -0.8239 0.7318 -0.1737 0.164 Uiso 1 1 calc R . . H10J H -0.6569 0.6731 -0.1805 0.164 Uiso 1 1 calc R . . C101 C -0.8625(5) 0.5523(4) -0.1567(2) 0.1052(12) Uani 1 1 d . . . H10K H -0.7960 0.5468 -0.0824 0.126 Uiso 1 1 calc R . . H10L H -0.9778 0.5614 -0.1427 0.126 Uiso 1 1 calc R . . C102 C -0.8281(5) 0.6191(3) -0.3327(4) 0.1087(12) Uani 1 1 d . . . H10M H -0.7300 0.6387 -0.3725 0.130 Uiso 1 1 calc R . . H10N H -0.9192 0.6593 -0.3614 0.130 Uiso 1 1 calc R . . C103 C -0.8868(4) 0.4848(3) -0.3537(2) 0.0781(7) Uani 1 1 d . . . H10O H -1.0065 0.4637 -0.3901 0.094 Uiso 1 1 calc R . . H10P H -0.8197 0.4429 -0.4073 0.094 Uiso 1 1 calc R . . H11 H 0.028(3) 0.2050(17) -0.1277(16) 0.040(5) Uiso 1 1 d . . . H7 H -0.423(3) 0.4339(19) -0.4184(19) 0.048(5) Uiso 1 1 d . . . H10 H -0.151(3) 0.3198(18) -0.2149(18) 0.045(5) Uiso 1 1 d . . . H12 H -0.368(3) 0.013(2) -0.0427(19) 0.052(5) Uiso 1 1 d . . . H8 H -0.556(3) 0.114(2) -0.1343(19) 0.055(6) Uiso 1 1 d . . . H14 H -0.812(3) 0.204(2) -0.365(2) 0.064(7) Uiso 1 1 d . . . H6 H -0.311(3) 0.640(2) -0.399(2) 0.065(7) Uiso 1 1 d . . . H5 H -0.232(3) 0.766(2) -0.214(2) 0.063(6) Uiso 1 1 d . . . H3 H -0.388(3) 0.480(2) -0.066(2) 0.058(6) Uiso 1 1 d . . . H1O H -0.696(3) 0.344(2) -0.204(2) 0.055(6) Uiso 1 1 d . . . H18 H -0.327(3) 0.2224(19) -0.4288(18) 0.049(5) Uiso 1 1 d . . . H4 H -0.281(3) 0.685(2) -0.049(2) 0.073(7) Uiso 1 1 d . . . H17 H -0.419(3) 0.109(2) -0.615(2) 0.066(7) Uiso 1 1 d . . . H15 H -0.903(4) 0.081(3) -0.554(3) 0.103(10) Uiso 1 1 d . . . H16 H -0.730(4) 0.035(3) -0.680(3) 0.082(8) Uiso 1 1 d . . . loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_23 _atom_site_aniso_U_13 _atom_site_aniso_U_12 Pd1 0.03088(8) 0.03241(8) 0.03794(9) 0.01555(6) -0.00195(5) 0.00562(5) Cl1 0.0492(2) 0.0542(2) 0.0447(2) 0.01850(17) 0.00795(16) 0.01660(17) N1 0.0322(5) 0.0356(6) 0.0392(6) 0.0170(5) 0.0003(4) 0.0072(4) O1 0.0399(6) 0.0565(7) 0.0498(6) 0.0272(5) 0.0120(5) 0.0193(5) C1 0.0352(6) 0.0390(7) 0.0343(6) 0.0165(5) 0.0028(5) 0.0110(5) C2 0.0347(6) 0.0359(6) 0.0336(6) 0.0147(5) 0.0023(5) 0.0098(5) C3 0.0315(7) 0.0490(8) 0.0523(8) 0.0279(7) 0.0051(6) 0.0088(6) C4 0.0352(7) 0.0473(8) 0.0523(8) 0.0307(7) 0.0049(6) 0.0080(6) C5 0.0318(6) 0.0380(7) 0.0492(8) 0.0191(6) 0.0023(6) 0.0054(5) C6 0.0364(7) 0.0373(7) 0.0482(8) 0.0225(6) 0.0051(6) 0.0068(5) C7 0.0365(6) 0.0360(6) 0.0345(6) 0.0122(5) 0.0018(5) 0.0137(5) C8 0.0546(9) 0.0501(9) 0.0353(7) 0.0110(6) 0.0000(6) 0.0148(7) C9 0.0639(11) 0.0479(9) 0.0469(9) -0.0007(7) -0.0091(8) 0.0145(8) C10 0.0570(10) 0.0354(8) 0.0664(11) 0.0099(7) -0.0038(8) 0.0078(7) C11 0.0635(11) 0.0415(8) 0.0516(9) 0.0205(7) 0.0070(8) 0.0098(7) C12 0.0550(9) 0.0372(7) 0.0359(7) 0.0119(6) 0.0052(6) 0.0117(6) C13 0.0516(8) 0.0320(6) 0.0385(7) 0.0149(5) -0.0029(6) 0.0089(6) C14 0.0560(11) 0.0547(10) 0.0565(11) 0.0171(8) -0.0085(8) 0.0007(8) C15 0.0829(16) 0.0583(12) 0.0681(14) 0.0163(10) -0.0279(13) -0.0097(11) C16 0.121(2) 0.0415(9) 0.0473(10) 0.0074(8) -0.0168(13) 0.0079(11) C17 0.1120(19) 0.0449(9) 0.0445(9) 0.0100(8) 0.0090(11) 0.0276(11) C18 0.0688(12) 0.0413(8) 0.0429(8) 0.0113(6) 0.0051(8) 0.0179(8) O100 0.0610(8) 0.0725(9) 0.0697(9) 0.0292(7) 0.0151(7) 0.0299(7) C100 0.111(3) 0.0671(18) 0.199(5) -0.025(2) -0.048(3) 0.0292(18) C101 0.134(3) 0.136(3) 0.0593(14) 0.0094(16) -0.0001(15) 0.091(3) C102 0.112(3) 0.094(2) 0.153(3) 0.070(2) 0.056(2) 0.035(2) C103 0.0904(18) 0.0895(17) 0.0617(13) 0.0225(12) 0.0058(12) 0.0349(14) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Cl Cl 0.1484 0.1585 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Pd Pd -0.9988 1.0072 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_site_symmetry_1 _geom_angle_site_symmetry_3 _geom_angle_publ_flag N1 Pd1 N1 180.00(8) 2 . ? N1 Pd1 Cl1 91.14(4) 2 . ? N1 Pd1 Cl1 88.86(4) . . ? N1 Pd1 Cl1 88.86(4) 2 2 ? N1 Pd1 Cl1 91.14(4) . 2 ? Cl1 Pd1 Cl1 180.00(3) . 2 ? C4 N1 C5 117.81(12) . . ? C4 N1 Pd1 120.58(9) . . ? C5 N1 Pd1 121.57(10) . . ? O1 C1 C7 108.12(12) . . ? O1 C1 C13 110.76(12) . . ? C7 C1 C13 113.79(11) . . ? O1 C1 C2 104.89(11) . . ? C7 C1 C2 111.34(11) . . ? C13 C1 C2 107.60(12) . . ? C6 C2 C3 117.46(12) . . ? C6 C2 C1 122.81(12) . . ? C3 C2 C1 119.64(12) . . ? C4 C3 C2 119.38(14) . . ? N1 C4 C3 123.00(13) . . ? N1 C5 C6 122.19(13) . . ? C5 C6 C2 120.13(13) . . ? C12 C7 C8 117.92(14) . . ? C12 C7 C1 124.39(13) . . ? C8 C7 C1 117.59(13) . . ? C9 C8 C7 121.49(16) . . ? C8 C9 C10 120.06(17) . . ? C11 C10 C9 119.20(17) . . ? C10 C11 C12 120.83(17) . . ? C7 C12 C11 120.49(15) . . ? C18 C13 C14 118.54(17) . . ? C18 C13 C1 121.26(15) . . ? C14 C13 C1 120.19(16) . . ? C13 C14 C15 120.1(2) . . ? C16 C15 C14 120.6(2) . . ? C15 C16 C17 120.2(2) . . ? C16 C17 C18 120.0(2) . . ? C13 C18 C17 120.6(2) . . ? C101 O100 C103 106.5(2) . . ? C102 C100 C101 104.2(3) . . ? O100 C101 C100 105.8(3) . . ? C100 C102 C103 104.7(3) . . ? O100 C103 C102 108.5(3) . . ? loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance _geom_bond_site_symmetry_2 _geom_bond_publ_flag Pd1 N1 2.0283(11) 2 ? Pd1 N1 2.0283(11) . ? Pd1 Cl1 2.2964(4) . ? Pd1 Cl1 2.2964(4) 2 ? N1 C4 1.3406(19) . ? N1 C5 1.3419(18) . ? O1 C1 1.4260(18) . ? C1 C7 1.536(2) . ? C1 C13 1.536(2) . ? C1 C2 1.5369(18) . ? C2 C6 1.385(2) . ? C2 C3 1.388(2) . ? C3 C4 1.382(2) . ? C5 C6 1.3833(19) . ? C7 C12 1.389(2) . ? C7 C8 1.394(2) . ? C8 C9 1.380(3) . ? C9 C10 1.385(3) . ? C10 C11 1.377(3) . ? C11 C12 1.391(2) . ? C13 C18 1.387(3) . ? C13 C14 1.392(3) . ? C14 C15 1.398(3) . ? C15 C16 1.363(4) . ? C16 C17 1.373(4) . ? C17 C18 1.396(3) . ? O100 C101 1.392(3) . ? O100 C103 1.400(3) . ? C100 C102 1.463(6) . ? C100 C101 1.479(6) . ? C102 C103 1.472(4) . ? loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA _geom_hbond_site_symmetry_A O1 H1O O100 0.77(2) 1.99(2) 2.7548(18) 171(2) . loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion _geom_torsion_site_symmetry_1 _geom_torsion_site_symmetry_2 _geom_torsion_site_symmetry_3 _geom_torsion_site_symmetry_4 _geom_torsion_publ_flag C4 N1 N1 C5 -2.3(2) . . 2 2 ? O1 C1 C2 C3 34.49(18) . . . . ? O1 C1 C1 O1 180.0 . . 2 2 ? C3 C2 C1 O1 34.49(18) . . . . ? C8 C7 C1 O1 50.51(17) . . . . ? C14 C13 C1 O1 7.42(19) . . . . ?