#------------------------------------------------------------------------------ #$Date: 2025-08-20 20:19:29 +0100 (Wed, 20 Aug 2025) $ #$Revision: 301836 $ #$URL: svn://www.crystallography.net/cod/cif/4/30/87/4308789.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/ # # All data on this site have been placed in the public domain by the # contributors. # data_4308789 loop_ _publ_author_name 'Sanjib Kar' 'Nripen Chanda' 'Shaikh M. Mobin' 'Francisco A. Urbanos' 'Mark Niemeyer' 'Vedavati G. Puranik' 'Reyes Jimenez-Aparicio' 'Goutam Kumar Lahiri' _publ_section_title ; Unusual Monodentate Binding Mode of 2,2'-Dipyridylamine (L) in Isomeric trans-(acac)2RuII(L)2, trans-[(acac)2RuIII(L)2]ClO4, and cis-(acac)2RuII(L)2 (acac = Acetylacetonate). Synthesis, Structures, and Spectroscopic, Electrochemical, and Magnetic Aspects ; _journal_name_full 'Inorganic Chemistry' _journal_page_first 1571 _journal_page_last 1579 _journal_paper_doi 10.1021/ic049219v _journal_volume 44 _journal_year 2005 _chemical_formula_sum 'C30 H32 N6 O4 Ru' _chemical_formula_weight 641.69 _space_group_IT_number 52 _symmetry_cell_setting orthorhombic _symmetry_space_group_name_Hall '-P 2ab 2c' _symmetry_space_group_name_H-M 'P c n n' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL-97 _cell_angle_alpha 90.00 _cell_angle_beta 90.00 _cell_angle_gamma 90.00 _cell_formula_units_Z 4 _cell_length_a 11.2430(15) _cell_length_b 12.0250(18) _cell_length_c 21.839(2) _cell_measurement_reflns_used 25 _cell_measurement_temperature 293(2) _cell_measurement_theta_max 13.4500 _cell_measurement_theta_min 4.8800 _cell_volume 2952.6(7) _computing_cell_refinement 'Argus (Nonius, MACH3 software)' _computing_data_collection 'Argus (Nonius, MACH3 software)' _computing_data_reduction 'Maxus (Nonius software)' _computing_molecular_graphics Ortep _computing_publication_material Shelx97 _computing_structure_refinement 'SHELXL-97 (Sheldrick, 1997)' _computing_structure_solution 'SHELXS-97 (Sheldrick, 1990)' _diffrn_ambient_temperature 293(2) _diffrn_measured_fraction_theta_full 0.888 _diffrn_measured_fraction_theta_max 0.888 _diffrn_measurement_device_type 'Nonius MACH3' _diffrn_measurement_method \w/q-scan _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0000 _diffrn_reflns_av_sigmaI/netI 0.1601 _diffrn_reflns_limit_h_max 14 _diffrn_reflns_limit_h_min 0 _diffrn_reflns_limit_k_max 15 _diffrn_reflns_limit_k_min 0 _diffrn_reflns_limit_l_max 28 _diffrn_reflns_limit_l_min 0 _diffrn_reflns_number 3395 _diffrn_reflns_theta_full 27.41 _diffrn_reflns_theta_max 27.41 _diffrn_reflns_theta_min 1.86 _diffrn_standards_decay_% <3% _diffrn_standards_interval_time 3600 _diffrn_standards_number 3 _exptl_absorpt_coefficient_mu 0.576 _exptl_absorpt_correction_T_max 0.9186 _exptl_absorpt_correction_T_min 0.8694 _exptl_absorpt_correction_type psi-scan _exptl_crystal_colour 'Dark Green' _exptl_crystal_density_diffrn 1.444 _exptl_crystal_density_method 'not measured' _exptl_crystal_description Block _exptl_crystal_F_000 1320 _exptl_crystal_size_max 0.25 _exptl_crystal_size_mid 0.20 _exptl_crystal_size_min 0.15 _refine_diff_density_max 0.479 _refine_diff_density_min -0.666 _refine_diff_density_rms 0.093 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 0.992 _refine_ls_hydrogen_treatment mixed _refine_ls_matrix_type full _refine_ls_number_parameters 188 _refine_ls_number_reflns 3395 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 0.992 _refine_ls_R_factor_all 0.1929 _refine_ls_R_factor_gt 0.0539 _refine_ls_shift/su_max 0.000 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'w=1/[\s^2^(Fo^2^)+(0.0313P)^2^+1.0145P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.0860 _refine_ls_wR_factor_ref 0.1162 _reflns_number_gt 1550 _reflns_number_total 3395 _reflns_threshold_expression >2sigma(I) _cod_data_source_file ic049219vsi20041106_073437.cif _cod_data_source_block gk205i _cod_depositor_comments ; The following automatic conversions were performed: '_symmetry_cell_setting' value 'Orthorhombic' changed to 'orthorhombic' according to '/home/saulius/struct/CIF-dictionaries/cif_core.dic' dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29. '_exptl_absorpt_correction_type' value 'Psi-scan' changed to 'psi-scan' according to '/home/saulius/struct/CIF-dictionaries/cif_core.dic' dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29. Automatic conversion script Id: cif_fix_enum 1527 2010-12-29 10:47:43Z saulius The following automatic conversions were performed: '_refine_ls_weighting_scheme' value 'calc w=1/[\s^2^(Fo^2^)+(0.0313P)^2^+1.0145P] where P=(Fo^2^+2Fc^2^)/3' was changed to 'calc'. New tag '_refine_ls_weighting_details' was created. The value of the new tag was set to 'w=1/[\s^2^(Fo^2^)+(0.0313P)^2^+1.0145P] where P=(Fo^2^+2Fc^2^)/3'. Automatic conversion script Id: cif_fix_values 3143 2015-03-26 13:38:13Z robertas ; _cod_database_code 4308789 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x+1/2, -y+1/2, z' 'x, -y, -z+1/2' '-x+1/2, y+1/2, -z+1/2' '-x, -y, -z' 'x-1/2, y-1/2, -z' '-x, y, z-1/2' 'x-1/2, -y-1/2, z-1/2' loop_ _atom_site_label _atom_site_type_symbol _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_occupancy _atom_site_calc_flag _atom_site_refinement_flags _atom_site_disorder_assembly _atom_site_disorder_group Ru Ru 0.7500 0.2500 0.49494(2) 0.03493(17) Uani 1 d S . . O1 O 0.9302(3) 0.2710(3) 0.49505(15) 0.0418(10) Uani 1 d . . . O2 O 0.7234(3) 0.3657(3) 0.56188(15) 0.0424(11) Uani 1 d . . . N2 N 0.7217(4) 0.3782(4) 0.43161(17) 0.0380(13) Uani 1 d . . . N1 N 0.8811(4) 0.3291(4) 0.3708(2) 0.0500(13) Uani 1 d . . . H101 H 0.9072 0.2983 0.4037 0.060 Uiso 1 calc R . . N3 N 0.9136(5) 0.3478(5) 0.2662(2) 0.0762(19) Uani 1 d . . . C5 C 0.7701(6) 0.5050(5) 0.6335(3) 0.075(2) Uani 1 d . . . H5A H 0.8371 0.5502 0.6447 0.090 Uiso 1 calc R . . H5 H 0.7413 0.4663 0.6690 0.090 Uiso 1 calc R . . H5B H 0.7082 0.5514 0.6174 0.090 Uiso 1 calc R . . C4 C 0.8080(6) 0.4210(5) 0.5851(3) 0.0483(16) Uani 1 d . . . C3 C 0.9284(6) 0.4136(5) 0.5702(3) 0.0516(16) Uani 1 d . . . H3 H 0.9783 0.4636 0.5901 0.062 Uiso 1 calc R . . C2 C 0.9834(5) 0.3409(5) 0.5295(2) 0.0424(15) Uani 1 d . . . C1 C 1.1169(5) 0.3412(5) 0.5232(3) 0.0646(19) Uani 1 d . . . H1B H 1.1508 0.2901 0.5521 0.077 Uiso 1 calc R . . H1A H 1.1467 0.4147 0.5311 0.077 Uiso 1 calc R . . H1 H 1.1384 0.3191 0.4824 0.077 Uiso 1 calc R . . C6 C 0.6299(5) 0.4484(5) 0.4430(3) 0.0486(16) Uani 1 d . . . H6 H 0.5881 0.4389 0.4794 0.058 Uiso 1 calc R . . C7 C 0.5941(6) 0.5326(5) 0.4047(3) 0.0590(18) Uani 1 d . . . H7 H 0.5291 0.5771 0.4144 0.071 Uiso 1 calc R . . C8 C 0.6569(6) 0.5491(6) 0.3518(3) 0.067(2) Uani 1 d . . . H8 H 0.6345 0.6051 0.3248 0.081 Uiso 1 calc R . . C9 C 0.7535(8) 0.4826(5) 0.3387(2) 0.0613(17) Uani 1 d . . . H9 H 0.7982 0.4945 0.3035 0.074 Uiso 1 calc R . . C10 C 0.7831(5) 0.3974(5) 0.3791(3) 0.0464(16) Uani 1 d . . . C11 C 0.9447(5) 0.3021(5) 0.3177(3) 0.0445(15) Uani 1 d . . . C15 C 1.0358(6) 0.2267(6) 0.3225(3) 0.068(2) Uani 1 d . . . H15 H 1.0552 0.1951 0.3601 0.081 Uiso 1 calc R . . C14 C 1.0969(6) 0.1994(6) 0.2708(3) 0.076(2) Uani 1 d . . . H14 H 1.1580 0.1473 0.2730 0.091 Uiso 1 calc R . . C13 C 1.0702(6) 0.2468(7) 0.2164(3) 0.0745(19) Uani 1 d . . . H13 H 1.1122 0.2304 0.1808 0.089 Uiso 1 calc R . . C12 C 0.9788(7) 0.3196(7) 0.2170(3) 0.096(3) Uani 1 d . . . H12 H 0.9591 0.3532 0.1800 0.116 Uiso 1 calc R . . loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_23 _atom_site_aniso_U_13 _atom_site_aniso_U_12 Ru 0.0308(3) 0.0412(3) 0.0327(3) 0.000 0.000 0.0007(4) O1 0.0316(16) 0.050(3) 0.0441(18) -0.002(2) -0.0033(18) -0.0012(18) O2 0.038(3) 0.050(3) 0.0392(19) -0.0034(19) 0.0056(17) 0.001(2) N2 0.041(4) 0.040(3) 0.033(2) -0.002(2) -0.001(2) 0.001(3) N1 0.049(3) 0.061(3) 0.040(3) 0.010(3) 0.003(2) 0.008(3) N3 0.075(4) 0.103(5) 0.050(3) 0.019(3) 0.016(3) 0.042(4) C5 0.080(6) 0.068(5) 0.076(4) -0.031(4) 0.008(5) 0.003(5) C4 0.053(4) 0.049(4) 0.042(3) -0.004(3) -0.003(3) -0.001(4) C3 0.054(4) 0.053(4) 0.048(4) -0.006(3) -0.011(3) -0.009(4) C2 0.038(4) 0.051(4) 0.038(3) 0.013(3) -0.007(3) -0.003(3) C1 0.042(4) 0.066(5) 0.085(5) 0.005(4) -0.018(3) -0.004(4) C6 0.042(4) 0.046(4) 0.058(4) -0.003(3) 0.004(3) 0.004(3) C7 0.053(4) 0.050(4) 0.074(5) 0.001(4) -0.001(4) 0.011(4) C8 0.074(5) 0.062(5) 0.066(4) 0.012(4) 0.002(4) 0.022(4) C9 0.077(4) 0.056(4) 0.051(3) 0.014(3) 0.012(5) 0.006(5) C10 0.041(4) 0.048(4) 0.051(3) -0.002(3) -0.003(3) 0.000(3) C11 0.044(4) 0.047(4) 0.043(3) 0.004(3) 0.003(3) -0.004(3) C15 0.068(5) 0.081(7) 0.054(4) 0.015(4) 0.010(3) 0.022(4) C14 0.066(5) 0.089(6) 0.073(5) 0.011(4) 0.019(4) 0.029(4) C13 0.079(5) 0.087(5) 0.057(4) 0.008(6) 0.021(3) 0.019(6) C12 0.102(7) 0.129(8) 0.058(5) 0.031(5) 0.021(5) 0.056(6) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Ru Ru -1.2594 0.8363 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_site_symmetry_1 _geom_angle_site_symmetry_3 _geom_angle_publ_flag O2 Ru O2 88.5(2) . 2_655 ? O2 Ru O1 93.44(15) . . ? O2 Ru O1 86.47(14) 2_655 . ? O2 Ru O1 86.47(14) . 2_655 ? O2 Ru O1 93.44(15) 2_655 2_655 ? O1 Ru O1 179.87(19) . 2_655 ? O2 Ru N2 87.08(14) . . ? O2 Ru N2 175.53(16) 2_655 . ? O1 Ru N2 93.44(16) . . ? O1 Ru N2 86.64(16) 2_655 . ? O2 Ru N2 175.53(16) . 2_655 ? O2 Ru N2 87.08(14) 2_655 2_655 ? O1 Ru N2 86.64(16) . 2_655 ? O1 Ru N2 93.44(16) 2_655 2_655 ? N2 Ru N2 97.4(2) . 2_655 ? C2 O1 Ru 123.2(3) . . ? C4 O2 Ru 122.4(4) . . ? C6 N2 C10 115.8(5) . . ? C6 N2 Ru 116.9(4) . . ? C10 N2 Ru 127.3(4) . . ? C10 N1 C11 130.6(5) . . ? C10 N1 H101 114.7 . . ? C11 N1 H101 114.7 . . ? C11 N3 C12 116.0(6) . . ? C4 C5 H5A 109.5 . . ? C4 C5 H5 109.5 . . ? H5A C5 H5 109.5 . . ? C4 C5 H5B 109.5 . . ? H5A C5 H5B 109.5 . . ? H5 C5 H5B 109.5 . . ? O2 C4 C3 127.0(6) . . ? O2 C4 C5 114.6(6) . . ? C3 C4 C5 118.4(6) . . ? C2 C3 C4 128.3(6) . . ? C2 C3 H3 115.8 . . ? C4 C3 H3 115.8 . . ? O1 C2 C3 125.6(5) . . ? O1 C2 C1 114.5(5) . . ? C3 C2 C1 119.9(6) . . ? C2 C1 H1B 109.5 . . ? C2 C1 H1A 109.5 . . ? H1B C1 H1A 109.5 . . ? C2 C1 H1 109.5 . . ? H1B C1 H1 109.5 . . ? H1A C1 H1 109.5 . . ? N2 C6 C7 124.8(6) . . ? N2 C6 H6 117.6 . . ? C7 C6 H6 117.6 . . ? C8 C7 C6 118.0(6) . . ? C8 C7 H7 121.0 . . ? C6 C7 H7 121.0 . . ? C7 C8 C9 119.9(6) . . ? C7 C8 H8 120.1 . . ? C9 C8 H8 120.1 . . ? C8 C9 C10 118.9(6) . . ? C8 C9 H9 120.6 . . ? C10 C9 H9 120.6 . . ? N2 C10 N1 114.4(5) . . ? N2 C10 C9 122.6(6) . . ? N1 C10 C9 122.9(6) . . ? N3 C11 C15 123.2(6) . . ? N3 C11 N1 118.8(6) . . ? C15 C11 N1 118.0(5) . . ? C14 C15 C11 118.2(6) . . ? C14 C15 H15 120.9 . . ? C11 C15 H15 120.9 . . ? C13 C14 C15 121.0(6) . . ? C13 C14 H14 119.5 . . ? C15 C14 H14 119.5 . . ? C12 C13 C14 115.7(6) . . ? C12 C13 H13 122.1 . . ? C14 C13 H13 122.1 . . ? N3 C12 C13 125.9(6) . . ? N3 C12 H12 117.0 . . ? C13 C12 H12 117.0 . . ? loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance _geom_bond_site_symmetry_2 _geom_bond_publ_flag Ru O2 2.040(4) . ? Ru O2 2.040(4) 2_655 ? Ru O1 2.042(3) . ? Ru O1 2.042(3) 2_655 ? Ru N2 2.095(4) . ? Ru N2 2.095(4) 2_655 ? O1 C2 1.276(6) . ? O2 C4 1.267(6) . ? N2 C6 1.357(6) . ? N2 C10 1.358(6) . ? N1 C10 1.386(6) . ? N1 C11 1.401(6) . ? N1 H101 0.8600 . ? N3 C11 1.300(7) . ? N3 C12 1.344(7) . ? C5 C4 1.522(7) . ? C5 H5A 0.9600 . ? C5 H5 0.9600 . ? C5 H5B 0.9600 . ? C4 C3 1.395(8) . ? C3 C2 1.393(7) . ? C3 H3 0.9300 . ? C2 C1 1.508(7) . ? C1 H1B 0.9600 . ? C1 H1A 0.9600 . ? C1 H1 0.9600 . ? C6 C7 1.374(7) . ? C6 H6 0.9300 . ? C7 C8 1.367(8) . ? C7 H7 0.9300 . ? C8 C9 1.379(9) . ? C8 H8 0.9300 . ? C9 C10 1.392(7) . ? C9 H9 0.9300 . ? C11 C15 1.372(8) . ? C15 C14 1.361(8) . ? C15 H15 0.9300 . ? C14 C13 1.353(8) . ? C14 H14 0.9300 . ? C13 C12 1.349(9) . ? C13 H13 0.9300 . ? C12 H12 0.9300 . ? loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion _geom_torsion_site_symmetry_1 _geom_torsion_site_symmetry_2 _geom_torsion_site_symmetry_3 _geom_torsion_site_symmetry_4 _geom_torsion_publ_flag O2 Ru O1 C2 -1.2(4) . . . . ? O2 Ru O1 C2 -89.4(4) 2_655 . . . ? O1 Ru O1 C2 -45(18) 2_655 . . . ? N2 Ru O1 C2 86.1(4) . . . . ? N2 Ru O1 C2 -176.7(4) 2_655 . . . ? O2 Ru O2 C4 88.3(4) 2_655 . . . ? O1 Ru O2 C4 2.0(4) . . . . ? O1 Ru O2 C4 -178.1(4) 2_655 . . . ? N2 Ru O2 C4 -91.3(4) . . . . ? N2 Ru O2 C4 93(2) 2_655 . . . ? O2 Ru N2 C6 -43.7(4) . . . . ? O2 Ru N2 C6 -48(3) 2_655 . . . ? O1 Ru N2 C6 -137.0(4) . . . . ? O1 Ru N2 C6 42.9(4) 2_655 . . . ? N2 Ru N2 C6 136.0(4) 2_655 . . . ? O2 Ru N2 C10 138.4(5) . . . . ? O2 Ru N2 C10 134(2) 2_655 . . . ? O1 Ru N2 C10 45.1(4) . . . . ? O1 Ru N2 C10 -135.0(4) 2_655 . . . ? N2 Ru N2 C10 -41.9(4) 2_655 . . . ? Ru O2 C4 C3 -0.1(9) . . . . ? Ru O2 C4 C5 178.8(4) . . . . ? O2 C4 C3 C2 -3.7(11) . . . . ? C5 C4 C3 C2 177.4(5) . . . . ? Ru O1 C2 C3 -1.6(7) . . . . ? Ru O1 C2 C1 178.8(4) . . . . ? C4 C3 C2 O1 4.6(10) . . . . ? C4 C3 C2 C1 -175.7(6) . . . . ? C10 N2 C6 C7 2.2(8) . . . . ? Ru N2 C6 C7 -175.9(5) . . . . ? N2 C6 C7 C8 -1.6(10) . . . . ? C6 C7 C8 C9 -0.5(10) . . . . ? C7 C8 C9 C10 1.8(11) . . . . ? C6 N2 C10 N1 175.9(5) . . . . ? Ru N2 C10 N1 -6.2(7) . . . . ? C6 N2 C10 C9 -0.8(8) . . . . ? Ru N2 C10 C9 177.1(5) . . . . ? C11 N1 C10 N2 160.1(5) . . . . ? C11 N1 C10 C9 -23.2(10) . . . . ? C8 C9 C10 N2 -1.2(10) . . . . ? C8 C9 C10 N1 -177.5(6) . . . . ? C12 N3 C11 C15 -2.0(10) . . . . ? C12 N3 C11 N1 179.3(6) . . . . ? C10 N1 C11 N3 2.1(10) . . . . ? C10 N1 C11 C15 -176.7(6) . . . . ? N3 C11 C15 C14 0.6(11) . . . . ? N1 C11 C15 C14 179.3(6) . . . . ? C11 C15 C14 C13 1.2(11) . . . . ? C15 C14 C13 C12 -1.4(12) . . . . ? C11 N3 C12 C13 1.8(13) . . . . ? C14 C13 C12 N3 -0.1(14) . . . . ? loop_ _cod_related_entry_id _cod_related_entry_database _cod_related_entry_code 1 PubChem 139129365