#------------------------------------------------------------------------------ #$Date: 2013-02-22 12:53:58 +0000 (Fri, 22 Feb 2013) $ #$Revision: 74190 $ #$URL: svn://www.crystallography.net/cod/cif/7/10/89/7108912.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/ # # All data on this site have been placed in the public domain by the # contributors. # data_7108912 loop_ _publ_author_name 'Shunsuke Kuwahara' 'Rie Chamura' 'Sho Tsuchiya' 'Mari Ikeda' 'Yoichi Habata' _publ_section_title ; Chirality transcription and amplification by [2]pseudorotaxanes ; _journal_name_full Chem.Commun. _journal_page_first 2186 _journal_volume 49 _journal_year 2012 _chemical_absolute_configuration rm _chemical_formula_sum 'C15 H18 F6 N P' _chemical_formula_weight 357.27 _chemical_name_systematic ; ? ; _space_group_IT_number 19 _symmetry_cell_setting orthorhombic _symmetry_space_group_name_Hall 'P 2ac 2ab' _symmetry_space_group_name_H-M 'P 21 21 21' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL-97 _cell_angle_alpha 90.00 _cell_angle_beta 90.00 _cell_angle_gamma 90.00 _cell_formula_units_Z 4 _cell_length_a 8.7662(6) _cell_length_b 11.1969(7) _cell_length_c 16.9395(12) _cell_measurement_reflns_used 1354 _cell_measurement_temperature 173 _cell_measurement_theta_max 21.55 _cell_measurement_theta_min 2.18 _cell_volume 1662.68(19) _computing_cell_refinement 'Bruker SMART' _computing_data_collection 'Bruker SMART' _computing_data_reduction 'Bruker SAINT' _computing_molecular_graphics 'Bruker SHELXTL' _computing_publication_material 'Bruker SHELXTL' _computing_structure_refinement 'SHELXL-97 (Sheldrick, 1997)' _computing_structure_solution 'SHELXS-97 (Sheldrick, 1990)' _diffrn_ambient_temperature 173 _diffrn_detector_area_resol_mean 8.333 _diffrn_measured_fraction_theta_full 1.000 _diffrn_measured_fraction_theta_max 1.000 _diffrn_measurement_device_type 'CCD area detector' _diffrn_measurement_method 'phi and omega scans' _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0425 _diffrn_reflns_av_sigmaI/netI 0.0472 _diffrn_reflns_limit_h_max 10 _diffrn_reflns_limit_h_min -9 _diffrn_reflns_limit_k_max 13 _diffrn_reflns_limit_k_min -13 _diffrn_reflns_limit_l_max 20 _diffrn_reflns_limit_l_min -16 _diffrn_reflns_number 8693 _diffrn_reflns_theta_full 24.81 _diffrn_reflns_theta_max 24.81 _diffrn_reflns_theta_min 2.18 _exptl_absorpt_coefficient_mu 0.222 _exptl_absorpt_correction_T_max 0.9799 _exptl_absorpt_correction_T_min 0.9557 _exptl_absorpt_correction_type empirical _exptl_absorpt_process_details 'SADABS; Sheldrick 1996' _exptl_crystal_colour colourless _exptl_crystal_density_diffrn 1.427 _exptl_crystal_density_method 'not measured' _exptl_crystal_description block _exptl_crystal_F_000 736 _exptl_crystal_size_max 0.21 _exptl_crystal_size_mid 0.18 _exptl_crystal_size_min 0.09 _refine_diff_density_max 0.438 _refine_diff_density_min -0.240 _refine_diff_density_rms 0.051 _refine_ls_abs_structure_details 'Flack H D (1983), Acta Cryst. A39, 876-881' _refine_ls_abs_structure_Flack -0.1(2) _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.017 _refine_ls_hydrogen_treatment mixed _refine_ls_matrix_type full _refine_ls_number_parameters 280 _refine_ls_number_reflns 2864 _refine_ls_number_restraints 36 _refine_ls_restrained_S_all 1.190 _refine_ls_R_factor_all 0.0757 _refine_ls_R_factor_gt 0.0508 _refine_ls_shift/su_max 0.000 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.0828P)^2^+0.4809P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.1305 _refine_ls_wR_factor_ref 0.1501 _reflns_number_gt 2114 _reflns_number_total 2864 _reflns_threshold_expression >2sigma(I) _[local]_cod_data_source_file c2cc38758a.txt _[local]_cod_data_source_block orth_p212121 _[local]_cod_cif_authors_sg_H-M P2(1)2(1)2(1) _cod_database_code 7108912 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x+1/2, -y, z+1/2' '-x, y+1/2, -z+1/2' 'x+1/2, -y+1/2, -z' loop_ _atom_site_label _atom_site_type_symbol _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_occupancy _atom_site_symmetry_multiplicity _atom_site_calc_flag _atom_site_refinement_flags P1 P 0.07104(16) 0.94368(12) 0.44110(8) 0.0468(4) Uani 1 1 d . F1 F -0.0617(4) 0.8492(3) 0.4618(2) 0.0710(10) Uani 1 1 d U F2 F 0.1932(4) 0.8411(3) 0.4596(2) 0.0658(10) Uani 1 1 d U C8 C -0.0688(7) 0.8347(4) 0.7179(3) 0.0455(13) Uani 1 1 d . N1 N 0.2482(5) 0.8056(4) 0.6352(3) 0.0376(10) Uani 1 1 d . C6 C -0.1325(7) 0.8387(5) 0.8552(4) 0.0517(14) Uani 1 1 d . C10 C 0.4420(5) 0.9618(4) 0.6566(3) 0.0394(11) Uani 1 1 d . F6 F 0.0733(5) 0.9738(3) 0.5339(2) 0.0779(11) Uani 1 1 d U C2 C 0.0604(7) 0.6482(5) 0.6007(3) 0.0442(12) Uani 1 1 d . F3 F 0.1980(5) 1.0343(4) 0.4205(3) 0.1122(16) Uani 1 1 d U C11 C 0.5740(6) 0.9381(5) 0.6148(3) 0.0468(12) Uani 1 1 d . C1 C 0.1479(5) 0.7062(4) 0.6674(3) 0.0360(11) Uani 1 1 d . C7 C -0.1579(6) 0.8775(5) 0.7789(4) 0.0514(14) Uani 1 1 d . C4 C 0.0701(7) 0.7143(5) 0.8096(3) 0.0474(12) Uani 1 1 d . C9 C 0.3528(6) 0.8627(5) 0.6949(3) 0.0455(13) Uani 1 1 d . F4 F -0.0550(5) 1.0426(4) 0.4311(3) 0.0945(13) Uani 1 1 d U C12 C 0.6543(6) 1.0289(5) 0.5784(3) 0.0507(14) Uani 1 1 d . C3 C 0.0476(5) 0.7537(4) 0.7325(3) 0.0351(11) Uani 1 1 d . C13 C 0.6019(7) 1.1447(5) 0.5836(3) 0.0503(14) Uani 1 1 d . F5 F 0.0615(8) 0.9017(5) 0.3535(3) 0.1373(18) Uani 1 1 d U C14 C 0.4727(7) 1.1699(6) 0.6248(4) 0.0612(17) Uani 1 1 d . C15 C 0.3921(6) 1.0800(5) 0.6611(3) 0.0508(14) Uani 1 1 d . C5 C -0.0191(7) 0.7584(6) 0.8700(4) 0.0598(17) Uani 1 1 d . H10 H 0.223(4) 0.649(3) 0.689(2) 0.017(9) Uiso 1 1 d . H4 H -0.234(6) 0.926(4) 0.770(3) 0.044(14) Uiso 1 1 d . H3 H 0.001(6) 0.697(5) 0.583(3) 0.045(17) Uiso 1 1 d . H14 H 0.737(7) 1.011(5) 0.546(3) 0.056(17) Uiso 1 1 d . H9 H 0.432(6) 0.782(5) 0.711(3) 0.066(15) Uiso 1 1 d . H13 H 0.621(6) 0.851(5) 0.612(3) 0.056(16) Uiso 1 1 d . H15 H 0.447(7) 1.256(5) 0.631(3) 0.069(18) Uiso 1 1 d . H2 H 0.130(6) 0.605(5) 0.564(3) 0.061(17) Uiso 1 1 d . H12 H 0.313(6) 1.094(4) 0.690(3) 0.047(16) Uiso 1 1 d . H5 H -0.184(7) 0.873(5) 0.891(3) 0.055(17) Uiso 1 1 d . H16 H 0.651(9) 1.200(7) 0.564(4) 0.10(3) Uiso 1 1 d . H6 H -0.017(7) 0.732(6) 0.926(4) 0.08(2) Uiso 1 1 d . H8 H 0.294(5) 0.894(4) 0.732(3) 0.037(14) Uiso 1 1 d . H1 H 0.007(6) 0.570(5) 0.615(3) 0.062(16) Uiso 1 1 d . H7 H 0.136(7) 0.659(5) 0.817(4) 0.067(19) Uiso 1 1 d . H11 H -0.080(7) 0.850(4) 0.673(3) 0.050(16) Uiso 1 1 d . H18 H 0.185(7) 0.866(5) 0.614(4) 0.067(18) Uiso 1 1 d . H17 H 0.296(8) 0.784(6) 0.599(4) 0.08(2) Uiso 1 1 d . loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_23 _atom_site_aniso_U_13 _atom_site_aniso_U_12 P1 0.0377(7) 0.0493(7) 0.0532(8) 0.0077(6) -0.0022(7) 0.0026(7) F1 0.0516(17) 0.0656(19) 0.096(3) 0.0066(18) -0.0114(19) -0.0126(17) F2 0.0499(17) 0.065(2) 0.082(2) 0.0071(18) 0.0090(16) 0.0158(16) C8 0.050(3) 0.043(3) 0.043(3) 0.006(2) 0.000(3) 0.016(3) N1 0.033(2) 0.045(2) 0.035(2) 0.0010(19) 0.002(2) 0.0010(19) C6 0.049(3) 0.056(3) 0.051(4) -0.018(3) 0.012(3) -0.008(3) C10 0.035(2) 0.047(3) 0.036(3) -0.002(2) -0.005(2) -0.003(3) F6 0.093(2) 0.0720(19) 0.069(2) -0.0143(16) -0.015(2) 0.015(2) C2 0.047(3) 0.042(3) 0.044(3) -0.005(2) -0.002(3) 0.004(3) F3 0.076(2) 0.082(2) 0.178(4) 0.040(3) 0.033(3) -0.014(2) C11 0.043(3) 0.048(3) 0.050(3) -0.010(2) 0.000(3) -0.005(3) C1 0.034(2) 0.039(2) 0.035(3) 0.005(2) 0.002(2) 0.007(2) C7 0.043(3) 0.042(3) 0.069(4) -0.006(3) 0.007(3) 0.010(3) C4 0.044(3) 0.056(3) 0.042(3) 0.006(2) 0.003(3) 0.006(3) C9 0.041(3) 0.059(3) 0.036(3) -0.002(3) -0.005(2) -0.004(3) F4 0.071(2) 0.080(2) 0.132(3) 0.045(2) 0.000(2) 0.027(2) C12 0.038(3) 0.065(4) 0.049(3) -0.014(3) 0.001(3) -0.012(3) C3 0.028(2) 0.038(2) 0.039(2) -0.0015(19) 0.003(2) 0.001(2) C13 0.053(4) 0.055(3) 0.043(3) 0.006(3) -0.007(3) -0.011(3) F5 0.180(4) 0.175(4) 0.056(2) 0.005(2) 0.004(3) 0.017(4) C14 0.051(4) 0.055(4) 0.077(4) 0.006(3) -0.007(3) 0.002(3) C15 0.037(3) 0.061(4) 0.054(3) 0.001(3) 0.003(3) 0.010(3) C5 0.059(4) 0.080(4) 0.041(3) -0.004(3) 0.008(3) -0.005(3) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' F F 0.0171 0.0103 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' P P 0.1023 0.0942 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle F3 P1 F5 91.3(3) F3 P1 F4 91.1(2) F5 P1 F4 94.1(3) F3 P1 F2 91.9(2) F5 P1 F2 90.3(3) F4 P1 F2 174.6(2) F3 P1 F6 94.2(3) F5 P1 F6 174.0(3) F4 P1 F6 88.1(2) F2 P1 F6 87.21(19) F3 P1 F1 179.5(3) F5 P1 F1 88.3(3) F4 P1 F1 88.8(2) F2 P1 F1 88.25(17) F6 P1 F1 86.2(2) C7 C8 C3 120.6(5) C7 C8 H11 125(4) C3 C8 H11 114(4) C9 N1 C1 115.0(4) C9 N1 H18 108(4) C1 N1 H18 109(4) C9 N1 H17 109(5) C1 N1 H17 111(5) H18 N1 H17 104(6) C5 C6 C7 119.8(6) C5 C6 H5 123(4) C7 C6 H5 117(4) C11 C10 C15 118.2(5) C11 C10 C9 121.0(5) C15 C10 C9 120.8(5) C1 C2 H3 108(4) C1 C2 H2 112(3) H3 C2 H2 119(5) C1 C2 H1 115(3) H3 C2 H1 111(5) H2 C2 H1 90(4) C12 C11 C10 120.9(5) C12 C11 H13 117(3) C10 C11 H13 122(3) C3 C1 C2 113.7(4) C3 C1 N1 110.0(4) C2 C1 N1 109.8(4) C3 C1 H10 110(2) C2 C1 H10 110(2) N1 C1 H10 103(2) C8 C7 C6 120.0(5) C8 C7 H4 121(3) C6 C7 H4 119(3) C5 C4 C3 120.2(5) C5 C4 H7 123(4) C3 C4 H7 117(4) C10 C9 N1 109.9(4) C10 C9 H9 111(3) N1 C9 H9 101(3) C10 C9 H8 109(3) N1 C9 H8 107(3) H9 C9 H8 118(4) C13 C12 C11 119.6(5) C13 C12 H14 120(3) C11 C12 H14 120(3) C8 C3 C4 118.6(5) C8 C3 C1 121.9(4) C4 C3 C1 119.5(4) C14 C13 C12 120.4(6) C14 C13 H16 119(5) C12 C13 H16 120(5) C13 C14 C15 120.4(6) C13 C14 H15 116(4) C15 C14 H15 123(4) C14 C15 C10 120.5(5) C14 C15 H12 122(3) C10 C15 H12 117(3) C6 C5 C4 120.8(6) C6 C5 H6 113(4) C4 C5 H6 126(4) loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance P1 F3 1.546(4) P1 F5 1.559(5) P1 F4 1.573(4) P1 F2 1.601(3) P1 F6 1.609(4) P1 F1 1.611(3) C8 C7 1.381(8) C8 C3 1.388(7) C8 H11 0.79(6) N1 C9 1.507(7) N1 C1 1.520(6) N1 H18 0.95(6) N1 H17 0.78(7) C6 C5 1.364(8) C6 C7 1.382(9) C6 H5 0.85(6) C10 C11 1.382(7) C10 C15 1.397(7) C10 C9 1.504(7) C2 C1 1.513(7) C2 H3 0.81(5) C2 H2 1.00(6) C2 H1 1.02(6) C11 C12 1.382(8) C11 H13 1.06(5) C1 C3 1.507(6) C1 H10 0.99(4) C7 H4 0.87(5) C4 C5 1.379(8) C4 C3 1.392(7) C4 H7 0.86(6) C9 H9 1.17(6) C9 H8 0.89(5) C12 C13 1.379(8) C12 H14 0.93(6) C13 C14 1.359(8) C13 H16 0.83(7) C14 C15 1.375(8) C14 H15 0.99(5) C15 H12 0.86(6) C5 H6 0.99(7)