#------------------------------------------------------------------------------ #$Date: 2018-08-16 12:22:43 +0100 (Thu, 16 Aug 2018) $ #$Revision: 209795 $ #$URL: svn://www.crystallography.net/cod/cif/7/10/89/7108916.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/ # # All data on this site have been placed in the public domain by the # contributors. # data_7108916 loop_ _publ_author_name 'Liu, Bangyu' 'Zheng, Gang' 'Liu, Xiaocui' 'Xu, Cong' 'Liu, Jingxin' 'Wang, Mang' _publ_section_title ; Regio- and stereoselective synthesis of 2-cyclopentenones via a hydrogenolysis-terminated Heck cyclization of \b-alkylthio dienones. ; _journal_coden_ASTM CHCOFS _journal_issue 22 _journal_name_full ; Chemical Communications (Cambridge, United Kingdom) ; _journal_page_first 2201 _journal_page_last 2203 _journal_paper_doi 10.1039/c3cc37571d _journal_volume 49 _journal_year 2013 _chemical_formula_sum 'C20 H20 O2 S' _chemical_formula_weight 324.42 _space_group_IT_number 14 _symmetry_cell_setting monoclinic _symmetry_space_group_name_Hall '-P 2ybc' _symmetry_space_group_name_H-M 'P 1 21/c 1' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL-97 _cell_angle_alpha 90.00 _cell_angle_beta 107.291(4) _cell_angle_gamma 90.00 _cell_formula_units_Z 4 _cell_length_a 19.0155(8) _cell_length_b 8.2100(3) _cell_length_c 11.6450(5) _cell_measurement_temperature 293(2) _cell_volume 1735.83(13) _computing_cell_refinement CrysAlis _computing_data_collection 'CrysAlis (Oxford Diffraction,2006)' _computing_data_reduction CrysAlis _computing_structure_refinement 'SHELXL-97 (Sheldrick, 1997)' _computing_structure_solution 'SHELXS-97 (Sheldrick, 1990)' _diffrn_ambient_temperature 293(2) _diffrn_measured_fraction_theta_full 0.996 _diffrn_measured_fraction_theta_max 0.996 _diffrn_measurement_device_type 'Oxford diffraction Gemini R Ultra' _diffrn_measurement_method '\w scan' _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0206 _diffrn_reflns_av_sigmaI/netI 0.0274 _diffrn_reflns_limit_h_max 22 _diffrn_reflns_limit_h_min -17 _diffrn_reflns_limit_k_max 9 _diffrn_reflns_limit_k_min -8 _diffrn_reflns_limit_l_max 13 _diffrn_reflns_limit_l_min -13 _diffrn_reflns_number 6642 _diffrn_reflns_theta_full 25.00 _diffrn_reflns_theta_max 25.00 _diffrn_reflns_theta_min 3.09 _exptl_absorpt_coefficient_mu 0.193 _exptl_absorpt_correction_T_max 0.944 _exptl_absorpt_correction_T_min 0.926 _exptl_absorpt_correction_type multi-scan _exptl_crystal_colour colorless _exptl_crystal_density_diffrn 1.241 _exptl_crystal_density_method 'not measured' _exptl_crystal_description block _exptl_crystal_F_000 688 _exptl_crystal_size_max 0.4 _exptl_crystal_size_mid 0.35 _exptl_crystal_size_min 0.3 _refine_diff_density_max 0.145 _refine_diff_density_min -0.212 _refine_diff_density_rms 0.040 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.091 _refine_ls_hydrogen_treatment constr _refine_ls_matrix_type full _refine_ls_number_parameters 210 _refine_ls_number_reflns 3037 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.091 _refine_ls_R_factor_all 0.0575 _refine_ls_R_factor_gt 0.0427 _refine_ls_shift/su_max 0.000 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.0501P)^2^+0.3350P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.1047 _refine_ls_wR_factor_ref 0.1137 _reflns_number_gt 2397 _reflns_number_total 3048 _reflns_threshold_expression >2sigma(I) _cod_data_source_file c3cc37571d.txt _cod_data_source_block w _cod_original_cell_volume 1735.83(12) _cod_original_sg_symbol_H-M 'P 21/c' _cod_database_code 7108916 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, y+1/2, -z+1/2' '-x, -y, -z' 'x, -y-1/2, z-1/2' loop_ _atom_site_label _atom_site_type_symbol _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_occupancy _atom_site_symmetry_multiplicity _atom_site_calc_flag _atom_site_refinement_flags S1 S 0.19022(3) 0.43768(8) 0.89183(4) 0.0654(2) Uani 1 1 d . C13 C 0.26840(11) 0.5327(2) 0.87779(15) 0.0473(4) Uani 1 1 d . C14 C 0.33990(11) 0.5417(2) 0.97971(16) 0.0515(5) Uani 1 1 d . H14 H 0.3316 0.5998 1.0480 0.062 Uiso 1 1 calc R C15 C 0.27382(10) 0.5996(2) 0.77424(15) 0.0474(4) Uani 1 1 d . C1 C 0.37255(10) 0.3752(2) 1.02028(15) 0.0429(4) Uani 1 1 d . C2 C 0.36993(11) 0.2520(2) 0.93830(16) 0.0504(5) Uani 1 1 d . H2 H 0.3455 0.2690 0.8573 0.060 Uiso 1 1 calc R C7 C 0.21826(10) 0.6043(2) 0.65465(15) 0.0457(4) Uani 1 1 d . C3 C 0.40934(11) 0.3474(2) 1.14002(16) 0.0531(5) Uani 1 1 d . H3 H 0.4118 0.4293 1.1962 0.064 Uiso 1 1 calc R O1 O 0.36766(9) 0.7567(2) 0.72735(14) 0.0877(6) Uani 1 1 d . O2 O 0.07069(9) 0.6061(2) 0.30954(12) 0.0853(5) Uani 1 1 d . C16 C 0.34590(12) 0.6758(2) 0.79747(18) 0.0583(5) Uani 1 1 d . C8 C 0.14657(11) 0.6533(3) 0.63728(17) 0.0598(5) Uani 1 1 d . H8 H 0.1319 0.6848 0.7034 0.072 Uiso 1 1 calc R C4 C 0.40319(12) 0.1041(2) 0.97543(19) 0.0578(5) Uani 1 1 d . H4 H 0.4011 0.0221 0.9194 0.069 Uiso 1 1 calc R C9 C 0.18773(11) 0.5616(3) 0.44077(18) 0.0629(6) Uani 1 1 d . H9 H 0.2021 0.5302 0.3744 0.076 Uiso 1 1 calc R C10 C 0.11657(11) 0.6096(3) 0.42557(17) 0.0590(5) Uani 1 1 d . C5 C 0.43929(11) 0.0773(2) 1.0944(2) 0.0595(5) Uani 1 1 d . H5 H 0.4615 -0.0228 1.1192 0.071 Uiso 1 1 calc R C6 C 0.44259(11) 0.1985(3) 1.17710(18) 0.0604(5) Uani 1 1 d . H6 H 0.4671 0.1807 1.2580 0.072 Uiso 1 1 calc R C11 C 0.09575(11) 0.6568(3) 0.52419(18) 0.0656(6) Uani 1 1 d . H11 H 0.0477 0.6910 0.5148 0.079 Uiso 1 1 calc R C12 C 0.23805(11) 0.5594(3) 0.55346(17) 0.0560(5) Uani 1 1 d . H12 H 0.2862 0.5272 0.5621 0.067 Uiso 1 1 calc R C18 C 0.20787(14) 0.4086(3) 1.05199(19) 0.0762(7) Uani 1 1 d . H18A H 0.2465 0.3284 1.0813 0.091 Uiso 1 1 calc R H18B H 0.2239 0.5102 1.0941 0.091 Uiso 1 1 calc R C17 C 0.39013(13) 0.6434(3) 0.92630(18) 0.0690(7) Uani 1 1 d . H17A H 0.4035 0.7449 0.9700 0.083 Uiso 1 1 calc R H17B H 0.4348 0.5839 0.9297 0.083 Uiso 1 1 calc R C19 C 0.13831(15) 0.3514(4) 1.0751(2) 0.0923(8) Uani 1 1 d . H19A H 0.1012 0.4340 1.0501 0.138 Uiso 1 1 calc R H19B H 0.1477 0.3303 1.1594 0.138 Uiso 1 1 calc R H19C H 0.1216 0.2533 1.0304 0.138 Uiso 1 1 calc R C20 C -0.00084(14) 0.6733(5) 0.2878(2) 0.1218(13) Uani 1 1 d . H20A H -0.0285 0.6089 0.3281 0.183 Uiso 1 1 calc R H20B H -0.0255 0.6734 0.2029 0.183 Uiso 1 1 calc R H20C H 0.0031 0.7829 0.3177 0.183 Uiso 1 1 calc R loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_23 _atom_site_aniso_U_13 _atom_site_aniso_U_12 S1 0.0641(4) 0.0852(4) 0.0487(3) 0.0097(3) 0.0194(3) -0.0037(3) C13 0.0611(12) 0.0386(9) 0.0415(9) -0.0001(8) 0.0143(8) 0.0046(8) C14 0.0716(13) 0.0397(10) 0.0379(9) -0.0026(8) 0.0079(9) -0.0029(9) C15 0.0573(11) 0.0411(10) 0.0421(10) 0.0018(8) 0.0122(8) 0.0038(9) C1 0.0478(10) 0.0432(10) 0.0393(9) 0.0017(8) 0.0153(8) -0.0039(8) C2 0.0641(12) 0.0489(11) 0.0401(10) 0.0004(8) 0.0183(9) -0.0007(9) C7 0.0510(11) 0.0449(10) 0.0418(9) 0.0048(8) 0.0147(8) 0.0039(8) C3 0.0587(12) 0.0564(12) 0.0410(10) -0.0001(9) 0.0097(9) 0.0007(10) O1 0.0833(11) 0.0976(12) 0.0687(10) 0.0352(9) 0.0017(8) -0.0342(9) O2 0.0586(9) 0.1420(16) 0.0473(8) 0.0171(9) 0.0035(7) -0.0106(10) C16 0.0683(13) 0.0468(11) 0.0509(11) 0.0102(9) 0.0039(10) -0.0079(10) C8 0.0629(13) 0.0753(14) 0.0463(11) 0.0087(10) 0.0241(10) 0.0174(11) C4 0.0681(13) 0.0474(11) 0.0633(13) -0.0031(10) 0.0277(11) 0.0044(10) C9 0.0568(12) 0.0915(16) 0.0431(10) -0.0029(11) 0.0190(9) 0.0021(11) C10 0.0504(12) 0.0790(14) 0.0448(11) 0.0142(10) 0.0100(9) -0.0060(10) C5 0.0532(12) 0.0540(12) 0.0742(14) 0.0131(11) 0.0233(11) 0.0113(10) C6 0.0546(12) 0.0721(14) 0.0498(11) 0.0137(11) 0.0084(9) 0.0068(10) C11 0.0483(12) 0.0907(16) 0.0593(12) 0.0193(12) 0.0183(10) 0.0180(11) C12 0.0460(11) 0.0740(13) 0.0497(11) 0.0008(10) 0.0167(9) 0.0068(10) C18 0.0880(17) 0.0926(17) 0.0546(13) 0.0115(12) 0.0314(12) -0.0027(14) C17 0.0835(15) 0.0500(12) 0.0569(12) 0.0103(10) -0.0046(11) -0.0226(11) C19 0.103(2) 0.114(2) 0.0763(16) 0.0146(15) 0.0520(15) 0.0047(17) C20 0.0547(16) 0.220(4) 0.0774(18) 0.046(2) -0.0001(13) 0.008(2) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' S S 0.1246 0.1234 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle C13 S1 C18 104.81(10) C15 C13 C14 112.85(17) C15 C13 S1 124.14(15) C14 C13 S1 122.93(13) C1 C14 C13 112.84(14) C1 C14 C17 111.74(17) C13 C14 C17 103.34(14) C13 C15 C16 108.94(16) C13 C15 C7 128.79(18) C16 C15 C7 122.25(16) C3 C1 C2 118.68(17) C3 C1 C14 120.08(16) C2 C1 C14 121.14(15) C4 C2 C1 120.63(17) C8 C7 C12 117.31(17) C8 C7 C15 123.04(17) C12 C7 C15 119.65(17) C1 C3 C6 120.56(18) C10 O2 C20 117.5(2) O1 C16 C15 126.77(18) O1 C16 C17 124.26(19) C15 C16 C17 108.94(17) C7 C8 C11 121.80(18) C5 C4 C2 120.29(18) C10 C9 C12 120.51(19) C9 C10 O2 115.81(19) C9 C10 C11 119.42(18) O2 C10 C11 124.77(19) C4 C5 C6 119.87(18) C5 C6 C3 119.96(18) C10 C11 C8 119.70(19) C9 C12 C7 121.26(18) C19 C18 S1 108.80(18) C16 C17 C14 105.59(16) loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance S1 C13 1.729(2) S1 C18 1.810(2) C13 C15 1.357(2) C13 C14 1.518(3) C14 C1 1.517(2) C14 C17 1.533(3) C15 C16 1.457(3) C15 C7 1.477(2) C1 C3 1.381(2) C1 C2 1.382(2) C2 C4 1.378(3) C7 C8 1.377(3) C7 C12 1.389(3) C3 C6 1.385(3) O1 C16 1.217(2) O2 C10 1.374(2) O2 C20 1.419(3) C16 C17 1.510(3) C8 C11 1.383(3) C4 C5 1.369(3) C9 C10 1.369(3) C9 C12 1.375(3) C10 C11 1.377(3) C5 C6 1.373(3) C18 C19 1.501(3)