#------------------------------------------------------------------------------ #$Date: 2016-03-26 11:44:51 +0000 (Sat, 26 Mar 2016) $ #$Revision: 180234 $ #$URL: svn://www.crystallography.net/cod/cif/7/11/20/7112059.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/ # # All data on this site have been placed in the public domain by the # contributors. # data_7112059 loop_ _publ_author_name 'Yuan-Chao Pang' 'Xiufang Hou' 'Lei Qin' 'Chao Wu' 'Wei Xue' 'Yan-Zhen Zheng' 'Zhiping Zheng' 'Xiao-Ming Chen' _publ_section_title ; Observation of allylic rearrangement in water-rich reaction ; _journal_name_full Chem.Commun. _journal_page_first 2910 _journal_paper_doi 10.1039/c3cc49287g _journal_volume 50 _journal_year 2014 _chemical_formula_sum 'C11 H14 Co N O4' _chemical_formula_weight 283.16 _chemical_name_systematic ; ? ; _space_group_IT_number 14 _symmetry_cell_setting monoclinic _symmetry_space_group_name_Hall '-P 2yn' _symmetry_space_group_name_H-M 'P 1 21/n 1' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL-97 _cell_angle_alpha 90.00 _cell_angle_beta 106.0050(10) _cell_angle_gamma 90.00 _cell_formula_units_Z 4 _cell_length_a 6.3144(6) _cell_length_b 20.2085(19) _cell_length_c 9.4966(9) _cell_measurement_temperature 288(2) _cell_volume 1164.84(19) _computing_structure_refinement 'SHELXL-97 (Sheldrick, 1997)' _computing_structure_solution 'SHELXS-97 (Sheldrick, 1990)' _diffrn_ambient_temperature 288(2) _diffrn_measured_fraction_theta_full 0.983 _diffrn_measured_fraction_theta_max 0.983 _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0190 _diffrn_reflns_av_sigmaI/netI 0.0222 _diffrn_reflns_limit_h_max 7 _diffrn_reflns_limit_h_min -7 _diffrn_reflns_limit_k_max 24 _diffrn_reflns_limit_k_min -24 _diffrn_reflns_limit_l_max 11 _diffrn_reflns_limit_l_min -11 _diffrn_reflns_number 6741 _diffrn_reflns_theta_full 26.00 _diffrn_reflns_theta_max 26.00 _diffrn_reflns_theta_min 2.45 _exptl_absorpt_coefficient_mu 1.475 _exptl_absorpt_correction_T_max 0.9167 _exptl_absorpt_correction_T_min 0.6263 _exptl_absorpt_correction_type multi-scan _exptl_absorpt_process_details SADABS _exptl_crystal_colour red _exptl_crystal_density_diffrn 1.615 _exptl_crystal_density_method 'not measured' _exptl_crystal_description block _exptl_crystal_F_000 584 _exptl_crystal_size_max 0.35 _exptl_crystal_size_mid 0.30 _exptl_crystal_size_min 0.06 _refine_diff_density_max 0.915 _refine_diff_density_min -0.725 _refine_diff_density_rms 0.115 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.060 _refine_ls_hydrogen_treatment constr _refine_ls_matrix_type full _refine_ls_number_parameters 179 _refine_ls_number_reflns 2245 _refine_ls_number_restraints 60 _refine_ls_restrained_S_all 1.063 _refine_ls_R_factor_all 0.0547 _refine_ls_R_factor_gt 0.0506 _refine_ls_shift/su_max 0.000 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.0788P)^2^+1.9001P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.1351 _refine_ls_wR_factor_ref 0.1385 _reflns_number_gt 2018 _reflns_number_total 2245 _reflns_threshold_expression >2sigma(I) _cod_data_source_file c3cc49287g.txt _cod_data_source_block co _cod_original_sg_symbol_H-M P2(1)/n _cod_database_code 7112059 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x+1/2, y+1/2, -z+1/2' '-x, -y, -z' 'x-1/2, -y-1/2, z-1/2' loop_ _atom_site_label _atom_site_type_symbol _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_occupancy _atom_site_symmetry_multiplicity _atom_site_calc_flag _atom_site_refinement_flags _atom_site_disorder_assembly _atom_site_disorder_group Co1 Co 0.53330(8) 0.00811(2) 0.14866(5) 0.0275(2) Uani 1 1 d . . . O1 O 0.2423(5) -0.08193(14) -0.1699(3) 0.0438(7) Uani 1 1 d . . . O2 O 0.2951(5) -0.06354(14) 0.0674(3) 0.0453(7) Uani 1 1 d . . . O3 O -0.2882(4) -0.07527(13) -0.0758(3) 0.0386(6) Uani 1 1 d . . . O4 O -0.2434(4) -0.06556(13) 0.1653(3) 0.0395(6) Uani 1 1 d . . . N1 N 0.5081(5) 0.00236(13) 0.3656(3) 0.0285(6) Uani 1 1 d D . . C1 C 0.0820(6) -0.15676(16) -0.0341(4) 0.0325(8) Uani 1 1 d D . . H1A H -0.0326 -0.1593 -0.1276 0.039 Uiso 1 1 calc R A 1 C2 C -0.0426(6) -0.14780(17) 0.0796(4) 0.0311(7) Uani 1 1 d D C . C3 C -0.0268(8) -0.1895(2) 0.1881(5) 0.0573(13) Uani 1 1 d D . . H3A H -0.1310 -0.1879 0.2407 0.069 Uiso 1 1 calc R B 1 C4 C 0.156(2) -0.2400(7) 0.2299(17) 0.052(4) Uani 0.427(12) 1 d PDU C 1 H4A H 0.0927 -0.2841 0.2162 0.062 Uiso 0.427(12) 1 calc PR C 1 H4B H 0.2334 -0.2349 0.3328 0.062 Uiso 0.427(12) 1 calc PR C 1 C5 C 0.3191(18) -0.2332(6) 0.1398(11) 0.055(4) Uani 0.427(12) 1 d PD C 1 H5A H 0.4156 -0.1959 0.1753 0.066 Uiso 0.427(12) 1 calc PR C 1 H5B H 0.4091 -0.2728 0.1507 0.066 Uiso 0.427(12) 1 calc PR C 1 C6 C 0.200(3) -0.2230(5) -0.0203(14) 0.046(4) Uani 0.427(12) 1 d PD C 1 H6A H 0.0951 -0.2584 -0.0551 0.055 Uiso 0.427(12) 1 calc PR C 1 H6B H 0.3049 -0.2229 -0.0784 0.055 Uiso 0.427(12) 1 calc PR C 1 C4' C 0.082(2) -0.2567(5) 0.2003(14) 0.068(4) Uani 0.573(12) 1 d PD C 2 H4'A H -0.0258 -0.2904 0.2028 0.081 Uiso 0.573(12) 1 calc PR C 2 H4'B H 0.1976 -0.2589 0.2920 0.081 Uiso 0.573(12) 1 calc PR C 2 C5' C 0.1816(17) -0.2718(4) 0.0755(11) 0.063(3) Uani 0.573(12) 1 d PD C 2 H5'A H 0.3048 -0.3019 0.1097 0.075 Uiso 0.573(12) 1 calc PR C 2 H5'B H 0.0722 -0.2936 -0.0029 0.075 Uiso 0.573(12) 1 calc PR C 2 C6' C 0.2598(16) -0.2095(4) 0.0172(17) 0.051(3) Uani 0.573(12) 1 d PD C 2 H6'A H 0.3172 -0.2212 -0.0643 0.061 Uiso 0.573(12) 1 calc PR C 2 H6'B H 0.3801 -0.1907 0.0933 0.061 Uiso 0.573(12) 1 calc PR C 2 C7 C 0.2134(6) -0.09538(17) -0.0471(4) 0.0307(7) Uani 1 1 d . C . C8 C -0.2023(5) -0.09166(17) 0.0556(4) 0.0288(7) Uani 1 1 d . . . C9 C 0.3994(18) 0.0620(5) 0.4029(8) 0.0670(12) Uani 0.50 1 d PD D 1 H9B H 0.2497 0.0646 0.3401 0.100 Uiso 0.50 1 calc PR D 1 H9C H 0.4778 0.1012 0.3860 0.100 Uiso 0.50 1 calc PR D 1 C9' C 0.3961(19) 0.0600(4) 0.5644(8) 0.0670(12) Uani 0.50 1 d PD . 1 H9'A H 0.4793 0.0971 0.6166 0.100 Uiso 0.50 1 calc PR . 1 H9'C H 0.2455 0.0639 0.5699 0.100 Uiso 0.50 1 calc PR . 1 C10 C 0.7255(14) -0.0069(6) 0.4663(8) 0.0670(12) Uani 0.50 1 d PD D 2 H10B H 0.8192 0.0299 0.4566 0.100 Uiso 0.50 1 calc PR D 2 H10C H 0.7901 -0.0471 0.4405 0.100 Uiso 0.50 1 calc PR D 2 C10' C 0.7175(14) -0.0116(6) 0.6259(8) 0.0670(12) Uani 0.50 1 d PD . 2 H10A H 0.7713 -0.0546 0.6656 0.100 Uiso 0.50 1 calc PR . 2 H10D H 0.8120 0.0220 0.6840 0.100 Uiso 0.50 1 calc PR . 2 C11 C 0.3636(18) -0.0528(5) 0.3848(8) 0.0670(12) Uani 0.50 1 d PD D 3 H11B H 0.4207 -0.0944 0.3598 0.100 Uiso 0.50 1 calc PR D 3 H11C H 0.2166 -0.0466 0.3201 0.100 Uiso 0.50 1 calc PR D 3 C11' C 0.3539(17) -0.0549(5) 0.5453(7) 0.0670(12) Uani 0.50 1 d PD . 3 H11A H 0.2025 -0.0493 0.5479 0.100 Uiso 0.50 1 calc PR . 3 H11D H 0.4044 -0.0978 0.5871 0.100 Uiso 0.50 1 calc PR . 3 loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_23 _atom_site_aniso_U_13 _atom_site_aniso_U_12 Co1 0.0341(3) 0.0361(3) 0.0159(3) 0.00185(16) 0.0129(2) 0.00368(18) O1 0.0495(16) 0.0498(16) 0.0399(15) 0.0056(12) 0.0256(13) -0.0064(13) O2 0.0432(15) 0.0498(16) 0.0450(15) -0.0133(13) 0.0155(13) -0.0144(13) O3 0.0441(14) 0.0462(15) 0.0275(12) 0.0041(11) 0.0130(11) 0.0132(12) O4 0.0469(15) 0.0488(15) 0.0275(12) 0.0052(11) 0.0179(11) 0.0169(12) N1 0.0324(15) 0.0391(16) 0.0183(13) -0.0002(10) 0.0144(12) 0.0005(11) C1 0.0412(19) 0.0318(17) 0.0310(17) -0.0018(14) 0.0208(15) -0.0009(15) C2 0.0326(17) 0.0349(18) 0.0302(17) 0.0043(14) 0.0157(14) 0.0015(14) C3 0.067(3) 0.062(3) 0.057(3) 0.028(2) 0.041(2) 0.027(2) C4 0.056(7) 0.054(7) 0.050(6) 0.022(5) 0.023(5) 0.018(6) C5 0.053(7) 0.060(7) 0.060(7) 0.017(6) 0.028(5) 0.033(6) C6 0.066(9) 0.023(6) 0.061(9) -0.014(5) 0.038(7) -0.002(6) C4' 0.081(8) 0.052(6) 0.084(9) 0.028(6) 0.046(7) 0.022(6) C5' 0.080(7) 0.038(4) 0.079(6) 0.012(4) 0.037(5) 0.017(4) C6' 0.067(7) 0.027(4) 0.073(9) -0.005(5) 0.045(6) -0.001(5) C7 0.0302(17) 0.0318(17) 0.0347(18) 0.0011(14) 0.0162(15) 0.0018(14) C8 0.0302(16) 0.0335(17) 0.0265(16) 0.0038(13) 0.0140(14) -0.0003(13) C9 0.087(3) 0.103(3) 0.0181(17) 0.0017(18) 0.0276(19) 0.000(2) C9' 0.087(3) 0.103(3) 0.0181(17) 0.0017(18) 0.0276(19) 0.000(2) C10 0.087(3) 0.103(3) 0.0181(17) 0.0017(18) 0.0276(19) 0.000(2) C10' 0.087(3) 0.103(3) 0.0181(17) 0.0017(18) 0.0276(19) 0.000(2) C11 0.087(3) 0.103(3) 0.0181(17) 0.0017(18) 0.0276(19) 0.000(2) C11' 0.087(3) 0.103(3) 0.0181(17) 0.0017(18) 0.0276(19) 0.000(2) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Co Co 0.3494 0.9721 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_site_symmetry_1 _geom_angle_site_symmetry_3 O4 Co1 O1 94.62(13) 1_655 3_655 O4 Co1 O3 164.99(10) 1_655 3 O1 Co1 O3 89.34(12) 3_655 3 O4 Co1 O2 86.20(12) 1_655 . O1 Co1 O2 164.56(12) 3_655 . O3 Co1 O2 86.18(13) 3 . O4 Co1 N1 96.96(10) 1_655 . O1 Co1 N1 100.47(11) 3_655 . O3 Co1 N1 96.55(11) 3 . O2 Co1 N1 94.72(11) . . O4 Co1 Co1 84.20(7) 1_655 3_655 O1 Co1 Co1 95.42(8) 3_655 3_655 O3 Co1 Co1 81.01(7) 3 3_655 O2 Co1 Co1 69.29(8) . 3_655 N1 Co1 Co1 163.90(9) . 3_655 C7 O1 Co1 110.0(2) . 3_655 C7 O2 Co1 140.1(3) . . C8 O3 Co1 126.3(2) . 3 C8 O4 Co1 122.8(2) . 1_455 C10 N1 C10' 137.6(4) . 3_656 C10 N1 C9' 52.9(6) . 3_656 C10' N1 C9' 111.7(6) 3_656 3_656 C10 N1 C9 111.4(6) . . C10' N1 C9 50.1(6) 3_656 . C9' N1 C9 138.5(4) 3_656 . C10 N1 C11' 54.3(6) . 3_656 C10' N1 C11' 107.8(6) 3_656 3_656 C9' N1 C11' 104.5(7) 3_656 3_656 C9 N1 C11' 61.2(6) . 3_656 C10 N1 C11 108.9(6) . . C10' N1 C11 56.4(6) 3_656 . C9' N1 C11 59.5(6) 3_656 . C9 N1 C11 104.0(7) . . C11' N1 C11 138.9(4) 3_656 . C10 N1 Co1 109.7(4) . . C10' N1 Co1 112.5(3) 3_656 . C9' N1 Co1 110.8(3) 3_656 . C9 N1 Co1 110.7(3) . . C11' N1 Co1 109.1(3) 3_656 . C11 N1 Co1 112.0(3) . . C2 C1 C7 111.4(3) . . C2 C1 C6 112.6(7) . . C7 C1 C6 117.4(8) . . C2 C1 C6' 109.7(6) . . C7 C1 C6' 103.1(4) . . C6 C1 C6' 19.6(6) . . C2 C1 H1A 104.7 . . C7 C1 H1A 104.7 . . C6 C1 H1A 104.7 . . C6' C1 H1A 123.1 . . C3 C2 C8 120.6(3) . . C3 C2 C1 122.8(3) . . C8 C2 C1 116.4(3) . . C2 C3 C4 121.8(5) . . C2 C3 C4' 124.8(5) . . C4 C3 C4' 22.1(8) . . C2 C3 H3A 119.1 . . C4 C3 H3A 119.1 . . C4' C3 H3A 111.5 . . C3 C4 C5 112.3(7) . . C3 C4 H4A 109.1 . . C5 C4 H4A 109.1 . . C3 C4 H4B 109.1 . . C5 C4 H4B 109.1 . . H4A C4 H4B 107.9 . . C6 C5 C4 110.7(12) . . C6 C5 H5A 109.5 . . C4 C5 H5A 109.5 . . C6 C5 H5B 109.5 . . C4 C5 H5B 109.5 . . H5A C5 H5B 108.1 . . C5 C6 C1 107.6(7) . . C5 C6 H6A 110.2 . . C1 C6 H6A 110.2 . . C5 C6 H6B 110.2 . . C1 C6 H6B 110.2 . . H6A C6 H6B 108.5 . . C3 C4' C5' 113.5(7) . . C3 C4' H4'A 108.9 . . C5' C4' H4'A 108.9 . . C3 C4' H4'B 108.9 . . C5' C4' H4'B 108.9 . . H4'A C4' H4'B 107.7 . . C6' C5' C4' 111.4(9) . . C6' C5' H5'A 109.3 . . C4' C5' H5'A 109.3 . . C6' C5' H5'B 109.3 . . C4' C5' H5'B 109.3 . . H5'A C5' H5'B 108.0 . . C5' C6' C1 114.3(7) . . C5' C6' H6'A 108.7 . . C1 C6' H6'A 108.7 . . C5' C6' H6'B 108.7 . . C1 C6' H6'B 108.7 . . H6'A C6' H6'B 107.6 . . O2 C7 O1 124.5(3) . . O2 C7 C1 117.1(3) . . O1 C7 C1 118.3(3) . . O4 C8 O3 125.4(3) . . O4 C8 C2 118.5(3) . . O3 C8 C2 116.1(3) . . N1 C9 C9' 110.5(6) . . N1 C9 H9B 109.5 . . C9' C9 H9B 109.5 . . N1 C9 H9C 109.5 . . C9' C9 H9C 109.5 . . H9B C9 H9C 108.1 . . N1 C9' C9 110.8(6) 3_656 . N1 C9' H9'A 109.5 3_656 . C9 C9' H9'A 109.5 . . N1 C9' H9'C 109.5 3_656 . C9 C9' H9'C 109.5 . . H9'A C9' H9'C 108.1 . . N1 C10 C10' 112.1(6) . . N1 C10 H10B 109.2 . . C10' C10 H10B 109.2 . . N1 C10 H10C 109.2 . . C10' C10 H10C 109.2 . . H10B C10 H10C 107.9 . . N1 C10' C10 110.2(6) 3_656 . N1 C10' H10A 109.6 3_656 . C10 C10' H10A 109.6 . . N1 C10' H10D 109.6 3_656 . C10 C10' H10D 109.6 . . H10A C10' H10D 108.1 . . N1 C11 C11' 109.6(6) . . N1 C11 H11B 109.8 . . C11' C11 H11B 109.8 . . N1 C11 H11C 109.8 . . C11' C11 H11C 109.8 . . H11B C11 H11C 108.2 . . N1 C11' C11 111.6(6) 3_656 . N1 C11' H11A 109.3 3_656 . C11 C11' H11A 109.3 . . N1 C11' H11D 109.3 3_656 . C11 C11' H11D 109.3 . . H11A C11' H11D 108.0 . . loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance _geom_bond_site_symmetry_2 Co1 O4 2.026(2) 1_655 Co1 O1 2.029(3) 3_655 Co1 O3 2.031(2) 3 Co1 O2 2.077(3) . Co1 N1 2.113(3) . Co1 Co1 2.7572(9) 3_655 O1 C7 1.259(4) . O1 Co1 2.029(3) 3_655 O2 C7 1.246(4) . O3 C8 1.259(4) . O3 Co1 2.031(2) 3 O4 C8 1.258(4) . O4 Co1 2.026(2) 1_455 N1 C10 1.453(8) . N1 C10' 1.461(7) 3_656 N1 C9' 1.473(7) 3_656 N1 C9 1.478(7) . N1 C11' 1.482(7) 3_656 N1 C11 1.484(7) . C1 C2 1.512(4) . C1 C7 1.516(5) . C1 C6 1.521(7) . C1 C6' 1.527(7) . C1 H1A 0.9800 . C2 C3 1.313(5) . C2 C8 1.493(5) . C3 C4 1.510(7) . C3 C4' 1.513(7) . C3 H3A 0.9300 . C4 C5 1.515(7) . C4 H4A 0.9700 . C4 H4B 0.9700 . C5 C6 1.512(7) . C5 H5A 0.9700 . C5 H5B 0.9700 . C6 H6A 0.9700 . C6 H6B 0.9700 . C4' C5' 1.516(7) . C4' H4'A 0.9700 . C4' H4'B 0.9700 . C5' C6' 1.513(7) . C5' H5'A 0.9700 . C5' H5'B 0.9700 . C6' H6'A 0.9700 . C6' H6'B 0.9700 . C9 C9' 1.541(8) . C9 H9B 0.9700 . C9 H9C 0.9700 . C9' N1 1.473(7) 3_656 C9' H9'A 0.9700 . C9' H9'C 0.9700 . C10 C10' 1.533(8) . C10 H10B 0.9700 . C10 H10C 0.9700 . C10' N1 1.461(7) 3_656 C10' H10A 0.9700 . C10' H10D 0.9700 . C11 C11' 1.542(8) . C11 H11B 0.9700 . C11 H11C 0.9700 . C11' N1 1.482(7) 3_656 C11' H11A 0.9700 . C11' H11D 0.9700 .