#------------------------------------------------------------------------------ #$Date: 2016-03-26 11:48:58 +0000 (Sat, 26 Mar 2016) $ #$Revision: 180236 $ #$URL: svn://www.crystallography.net/cod/cif/7/11/22/7112281.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/ # # All data on this site have been placed in the public domain by the # contributors. # data_7112281 loop_ _publ_author_name 'Li, Pei-Zhou' 'Wang, Xiao-Jun' 'Zhang, Kang' 'Nalaparaju, Anjaiah' 'Zou, Ruyi' 'Zou, Ruqiang' 'Jiang, Jianwen' 'Zhao, Yanli' _publ_section_title ; "Click"-extended nitrogen-rich metal-organic frameworks and their high performance in CO2-selective capture. ; _journal_issue 36 _journal_name_full 'Chemical communications (Cambridge, England)' _journal_page_first 4683 _journal_page_last 4685 _journal_paper_doi 10.1039/c3cc49457h _journal_volume 50 _journal_year 2014 _chemical_absolute_configuration R _chemical_formula_sum 'C13 H8 Cu N3 O5' _chemical_formula_weight 349.77 _chemical_name_systematic ; ? ; _space_group_IT_number 150 _symmetry_cell_setting hexagonal _symmetry_space_group_name_Hall 'P 3 2"' _symmetry_space_group_name_H-M 'P 3 2 1' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL-97 _cell_angle_alpha 90.00 _cell_angle_beta 90.00 _cell_angle_gamma 120.00 _cell_formula_units_Z 6 _cell_length_a 18.1402(10) _cell_length_b 18.1402(10) _cell_length_c 18.114(2) _cell_measurement_reflns_used 2137 _cell_measurement_temperature 296(2) _cell_measurement_theta_max 26.17 _cell_measurement_theta_min 3.16 _cell_volume 5162.1(7) _computing_cell_refinement 'Bruker SMART' _computing_data_collection 'Bruker SMART' _computing_data_reduction 'Bruker SAINT' _computing_molecular_graphics 'Bruker SHELXTL' _computing_publication_material 'Bruker SHELXTL' _computing_structure_refinement 'SHELXL-97 (Sheldrick, 1997)' _computing_structure_solution 'SHELXS-97 (Sheldrick, 1990)' _diffrn_ambient_temperature 296(2) _diffrn_measured_fraction_theta_full 0.997 _diffrn_measured_fraction_theta_max 0.997 _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0888 _diffrn_reflns_av_sigmaI/netI 0.1475 _diffrn_reflns_limit_h_max 24 _diffrn_reflns_limit_h_min -24 _diffrn_reflns_limit_k_max 24 _diffrn_reflns_limit_k_min -24 _diffrn_reflns_limit_l_max 14 _diffrn_reflns_limit_l_min -24 _diffrn_reflns_number 26714 _diffrn_reflns_theta_full 29.12 _diffrn_reflns_theta_max 29.12 _diffrn_reflns_theta_min 1.72 _exptl_absorpt_coefficient_mu 0.646 _exptl_absorpt_correction_T_max 0.962 _exptl_absorpt_correction_T_min 0.908 _exptl_absorpt_correction_type multi-scan _exptl_absorpt_process_details sadabs _exptl_crystal_colour blue _exptl_crystal_density_diffrn 0.675 _exptl_crystal_density_meas ? _exptl_crystal_density_method 'not measured' _exptl_crystal_description plate _exptl_crystal_F_000 1056 _exptl_crystal_size_max 0.15 _exptl_crystal_size_mid 0.15 _exptl_crystal_size_min 0.06 _refine_diff_density_max 1.646 _refine_diff_density_min -0.457 _refine_diff_density_rms 0.081 _refine_ls_abs_structure_details 'Flack H D (1983), Acta Cryst. A39, 876-881' _refine_ls_abs_structure_Flack 0.12(4) _refine_ls_extinction_coef 0.0040(11) _refine_ls_extinction_expression Fc^*^=kFc[1+0.001xFc^2^\l^3^/sin(2\q)]^-1/4^ _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.035 _refine_ls_hydrogen_treatment mixed _refine_ls_matrix_type full _refine_ls_number_parameters 199 _refine_ls_number_reflns 9222 _refine_ls_number_restraints 1 _refine_ls_restrained_S_all 1.037 _refine_ls_R_factor_all 0.1497 _refine_ls_R_factor_gt 0.0773 _refine_ls_shift/su_max 0.083 _refine_ls_shift/su_mean 0.031 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.0601P)^2^+0.0000P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.1680 _refine_ls_wR_factor_ref 0.1845 _reflns_number_gt 3763 _reflns_number_total 9222 _reflns_threshold_expression >2sigma(I) _cod_data_source_file c3cc49457h2.cif _cod_data_source_block ML14 _cod_depositor_comments ; The following automatic conversions were performed: '_exptl_crystal_density_meas' value 'none' was changed to '?' - the value is perceived as not measured. Automatic conversion script Id: cif_fix_values 3008 2015-01-20 13:52:24Z robertas The following automatic conversions were performed: '_symmetry_cell_setting' tag value 'Hexagon' was replaced with 'hexagonal' value as specified in the replacement file '/home/robertas/cod-tools/perl-scripts/inputs/replacement_values.lst'. Automatic conversion script Id: cif_fix_values 3143 2015-03-26 13:38:13Z robertas ; _cod_original_sg_symbol_H-M P321 _cod_database_code 7112281 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-y, x-y, z' '-x+y, -x, z' 'y, x, -z' '-x, -x+y, -z' 'x-y, -y, -z' loop_ _atom_site_label _atom_site_type_symbol _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_occupancy _atom_site_symmetry_multiplicity _atom_site_calc_flag _atom_site_refinement_flags _atom_site_disorder_assembly _atom_site_disorder_group Cu1 Cu 0.47324(10) 0.52552(10) 0.05833(3) 0.0453(2) Uani 1 1 d . . 1 O1 O 0.4361(4) 0.4137(4) 0.0962(4) 0.059(2) Uani 1 1 d . . 1 O2 O 0.4771(5) 0.3697(4) 0.0016(4) 0.067(2) Uani 1 1 d . . 1 O3 O 0.4793(5) 0.1103(4) 0.0000(3) 0.061(2) Uani 1 1 d . . 1 O4 O 0.4348(4) 0.0219(4) 0.1010(4) 0.059(2) Uani 1 1 d . . 1 O5 O 0.4295(5) 0.5684(5) 0.14741(19) 0.0756(11) Uani 1 1 d D A 1 H5A H 0.4646 0.6180 0.1568 0.113 Uiso 1 1 calc R A 1 H5B H 0.3734 0.5632 0.1469 0.113 Uiso 1 1 calc R A 1 C1 C 0.4442(5) 0.3553(5) 0.0625(4) 0.042(2) Uani 1 1 d . . 1 C2 C 0.4176(7) 0.2730(6) 0.0963(6) 0.059(3) Uani 1 1 d . . 1 C3 C 0.3741(6) 0.2487(6) 0.1660(5) 0.059(3) Uani 1 1 d . . 1 H3 H 0.3622 0.2859 0.1917 0.070 Uiso 1 1 calc R . 1 C4 C 0.3505(4) 0.1699(7) 0.1939(3) 0.0692(19) Uani 1 1 d . . 1 C5 C 0.3710(6) 0.1138(6) 0.1626(6) 0.061(3) Uani 1 1 d . . 1 H5 H 0.3530 0.0602 0.1826 0.074 Uiso 1 1 calc R . 1 C6 C 0.4199(6) 0.1419(6) 0.0998(5) 0.050(3) Uani 1 1 d . . 1 C7 C 0.4419(3) 0.2208(6) 0.0654(3) 0.0529(14) Uani 1 1 d . . 1 H7 H 0.4730 0.2364 0.0217 0.064 Uiso 1 1 calc R . 1 C8 C 0.4502(6) 0.0841(7) 0.0661(6) 0.070(4) Uani 1 1 d . . 1 C11 C 0.2164(6) 0.0468(7) 0.4363(5) 0.108(3) Uani 1 1 d . . 1 C12 C 0.1465(9) 0.0287(8) 0.4686(6) 0.158(5) Uani 1 1 d . . 1 H12 H 0.1143 0.0522 0.4519 0.190 Uiso 1 1 calc R . 1 C13 C 0.2810(9) 0.0247(10) 0.4690(5) 0.197(6) Uani 1 1 d . . 1 H13 H 0.3342 0.0440 0.4477 0.237 Uiso 1 1 calc R . 1 N1 N 0.3007(3) 0.1413(5) 0.2577(2) 0.0749(18) Uani 1 1 d G . 1 N2 N 0.2824(6) 0.1967(4) 0.2991(4) 0.229(7) Uani 1 1 d G . 1 N3 N 0.2304(5) 0.1502(4) 0.3598(3) 0.143(4) Uani 1 1 d G . 1 C10 C 0.2166(8) 0.0661(4) 0.3561(5) 0.26(6) Uani 1 1 d G . 1 C9 C 0.2600(7) 0.0605(4) 0.2929(5) 0.211(18) Uani 1 1 d G . 1 H9 H 0.2616 0.0125 0.2774 0.194 Uiso 1 1 calc R . 1 loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_23 _atom_site_aniso_U_13 _atom_site_aniso_U_12 Cu1 0.0592(8) 0.0627(9) 0.0345(3) -0.0007(8) 0.0040(8) 0.0459(3) O1 0.068(5) 0.056(4) 0.058(4) 0.016(3) 0.021(4) 0.035(4) O2 0.116(7) 0.041(4) 0.069(5) 0.008(3) 0.025(5) 0.059(4) O3 0.087(5) 0.056(4) 0.026(3) 0.003(3) 0.015(4) 0.025(4) O4 0.099(6) 0.033(4) 0.044(4) 0.010(3) 0.007(4) 0.033(4) O5 0.080(5) 0.112(6) 0.062(2) -0.016(6) 0.001(6) 0.068(2) C1 0.057(3) 0.069(6) 0.046(3) -0.031(5) -0.001(2) 0.042(6) C2 0.054(7) 0.039(5) 0.074(7) 0.006(5) -0.004(6) 0.017(5) C3 0.093(7) 0.080(7) 0.030(5) 0.013(4) 0.036(5) 0.063(6) C4 0.080(4) 0.064(6) 0.046(3) 0.026(5) 0.004(3) 0.022(6) C5 0.104(8) 0.050(5) 0.054(6) -0.012(4) -0.027(5) 0.056(5) C6 0.065(7) 0.042(6) 0.032(5) 0.021(5) 0.004(5) 0.018(5) C7 0.057(3) 0.069(6) 0.046(3) -0.031(5) -0.001(2) 0.042(6) C8 0.066(7) 0.073(7) 0.090(8) -0.060(6) -0.019(6) 0.048(6) C11 0.107(7) 0.174(9) 0.067(6) 0.042(6) 0.026(5) 0.088(7) C12 0.187(12) 0.203(14) 0.121(10) 0.063(8) 0.020(8) 0.125(11) C13 0.229(14) 0.337(18) 0.081(8) 0.091(10) 0.055(8) 0.182(14) N1 0.118(4) 0.081(5) 0.059(3) 0.048(4) 0.031(3) 0.074(4) N2 0.413(17) 0.174(9) 0.210(11) 0.164(9) 0.256(12) 0.231(11) N3 0.188(8) 0.133(7) 0.112(6) 0.048(5) 0.131(6) 0.082(6) C10 0.374(12) 0.406(14) 0.242(10) 0.126(8) 0.040(8) 0.250(11) C9 0.214(7) 0.348(9) 0.134(6) 0.084(6) 0.052(5) 0.176(7) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Cu Cu 0.3201 1.2651 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_site_symmetry_1 _geom_angle_site_symmetry_3 O1 Cu1 O2 88.5(3) . 4 O1 Cu1 O3 166.7(3) . 5_665 O2 Cu1 O3 89.63(15) 4 5_665 O1 Cu1 O4 89.73(14) . 3_665 O2 Cu1 O4 167.4(3) 4 3_665 O3 Cu1 O4 89.2(3) 5_665 3_665 O1 Cu1 O5 96.8(3) . . O2 Cu1 O5 97.8(3) 4 . O3 Cu1 O5 96.6(3) 5_665 . O4 Cu1 O5 94.8(3) 3_665 . O1 Cu1 Cu1 84.7(2) . 4 O2 Cu1 Cu1 80.40(18) 4 4 O3 Cu1 Cu1 81.99(17) 5_665 4 O4 Cu1 Cu1 86.98(18) 3_665 4 O5 Cu1 Cu1 177.71(10) . 4 C1 O1 Cu1 125.0(6) . . C1 O2 Cu1 130.2(6) . 4 C8 O3 Cu1 120.4(6) . 5_655 C8 O4 Cu1 116.2(7) . 2_655 Cu1 O5 H5A 109.6 . . Cu1 O5 H5B 121.6(14) . . H5A O5 H5B 108.0 . . O2 C1 O1 119.7(8) . . O2 C1 C2 118.5(7) . . O1 C1 C2 121.7(8) . . C7 C2 C3 118.1(9) . . C7 C2 C1 119.2(9) . . C3 C2 C1 122.4(10) . . C4 C3 C2 118.8(8) . . C4 C3 H3 120.6 . . C2 C3 H3 120.6 . . C5 C4 C3 124.5(6) . . C5 C4 N1 115.5(10) . . C3 C4 N1 120.0(10) . . C4 C5 C6 115.6(9) . . C4 C5 H5 122.2 . . C6 C5 H5 122.2 . . C5 C6 C7 122.6(9) . . C5 C6 C8 117.5(9) . . C7 C6 C8 119.8(8) . . C2 C7 C6 119.9(5) . . C2 C7 H7 120.0 . . C6 C7 H7 120.1 . . O4 C8 O3 133.8(8) . . O4 C8 C6 116.0(10) . . O3 C8 C6 109.7(9) . . C12 C11 C10 113.1(9) . . C12 C11 C13 122.9(9) . . C10 C11 C13 121.5(8) . . C11 C12 C12 119.8(7) . 6_556 C11 C12 H12 120.1 . . C12 C12 H12 120.1 6_556 . C13 C13 C11 116.5(5) 6_556 . C13 C13 H13 121.8 6_556 . C11 C13 H13 121.8 . . C4 N1 N2 120.6(8) . . C4 N1 C9 131.4(8) . . N2 N1 C9 108.0 . . N3 N2 N1 108.0 . . C10 N3 N2 108.0 . . C9 C10 N3 108.0 . . C9 C10 C11 134.7(7) . . N3 C10 C11 100.5(7) . . C10 C9 N1 108.0 . . C10 C9 H9 126.0 . . N1 C9 H9 126.0 . . loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance _geom_bond_site_symmetry_2 Cu1 O1 1.916(6) . Cu1 O2 1.956(6) 4 Cu1 O3 1.968(6) 5_665 Cu1 O4 1.974(6) 3_665 Cu1 O5 2.111(3) . Cu1 Cu1 2.6764(10) 4 O1 C1 1.293(9) . O2 C1 1.218(9) . O2 Cu1 1.956(6) 4 O3 C8 1.298(12) . O3 Cu1 1.968(6) 5_655 O4 C8 1.200(12) . O4 Cu1 1.974(6) 2_655 O5 H5A 0.8200 . O5 H5B 0.974(13) . C1 C2 1.455(12) . C2 C7 1.350(13) . C2 C3 1.436(13) . C3 C4 1.367(12) . C3 H3 0.9300 . C4 C5 1.369(12) . C4 N1 1.399(7) . C5 C6 1.375(14) . C5 H5 0.9300 . C6 C7 1.424(12) . C6 C8 1.532(12) . C7 H7 0.9300 . C11 C12 1.280(12) . C11 C10 1.494(12) . C11 C13 1.536(13) . C12 C12 1.451(18) 6_556 C12 H12 0.9300 . C13 C13 1.365(18) 6_556 C13 H13 0.9300 . N1 N2 1.4200 . N1 C9 1.4200 . N2 N3 1.4200 . N3 C10 1.4200 . C10 C9 1.4200 . C9 H9 0.9300 . loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion _geom_torsion_site_symmetry_1 _geom_torsion_site_symmetry_4 O2 Cu1 O1 C1 80.3(7) 4 . O3 Cu1 O1 C1 -1.6(17) 5_665 . O4 Cu1 O1 C1 -87.2(7) 3_665 . O5 Cu1 O1 C1 178.0(7) . . Cu1 Cu1 O1 C1 -0.2(6) 4 . Cu1 O2 C1 O1 1.5(14) 4 . Cu1 O2 C1 C2 -176.6(6) 4 . Cu1 O1 C1 O2 -0.6(12) . . Cu1 O1 C1 C2 177.4(6) . . O2 C1 C2 C7 10.6(13) . . O1 C1 C2 C7 -167.5(8) . . O2 C1 C2 C3 -176.5(10) . . O1 C1 C2 C3 5.5(14) . . C7 C2 C3 C4 -7.4(14) . . C1 C2 C3 C4 179.5(7) . . C2 C3 C4 C5 5.1(11) . . C2 C3 C4 N1 -173.5(7) . . C3 C4 C5 C6 1.2(10) . . N1 C4 C5 C6 179.9(7) . . C4 C5 C6 C7 -5.3(13) . . C4 C5 C6 C8 175.5(7) . . C3 C2 C7 C6 3.6(9) . . C1 C2 C7 C6 176.9(9) . . C5 C6 C7 C2 2.9(9) . . C8 C6 C7 C2 -177.9(9) . . Cu1 O4 C8 O3 9.9(16) 2_655 . Cu1 O4 C8 C6 -179.5(6) 2_655 . Cu1 O3 C8 O4 -10.8(16) 5_655 . Cu1 O3 C8 C6 178.2(5) 5_655 . C5 C6 C8 O4 -6.3(13) . . C7 C6 C8 O4 174.5(8) . . C5 C6 C8 O3 166.5(9) . . C7 C6 C8 O3 -12.7(11) . . C10 C11 C12 C12 150.3(14) . 6_556 C13 C11 C12 C12 -12(3) . 6_556 C12 C11 C13 C13 7(3) . 6_556 C10 C11 C13 C13 -153.3(16) . 6_556 C5 C4 N1 N2 173.8(7) . . C3 C4 N1 N2 -7.4(9) . . C5 C4 N1 C9 -6.9(11) . . C3 C4 N1 C9 171.9(8) . . C4 N1 N2 N3 179.5(7) . . C9 N1 N2 N3 0.0 . . N1 N2 N3 C10 0.0 . . N2 N3 C10 C9 0.0 . . N2 N3 C10 C11 144.3(9) . . C12 C11 C10 C9 -153.8(9) . . C13 C11 C10 C9 8.7(17) . . C12 C11 C10 N3 77.4(12) . . C13 C11 C10 N3 -120.0(12) . . N3 C10 C9 N1 0.0 . . C11 C10 C9 N1 -126.3(13) . . C4 N1 C9 C10 -179.4(8) . . N2 N1 C9 C10 0.0 . .