#------------------------------------------------------------------------------ #$Date: 2025-08-21 23:24:23 +0100 (Thu, 21 Aug 2025) $ #$Revision: 301857 $ #$URL: svn://www.crystallography.net/cod/cif/7/11/26/7112615.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/ # # All data on this site have been placed in the public domain by the # contributors. # data_7112615 loop_ _publ_author_name 'Alicea A. Leitch' 'Ilia Korobkov' 'Abdeljalil Assoud' 'Jaclyn L. Brusso' _publ_section_title ; Non-innocent pyridyl nitrogens: unprecedented interconversion of N-bridgehead-thiadiazolium salts and thiatriazine in the generation of thiatriazinyl ; _journal_name_full Chem.Commun. _journal_page_first 4934 _journal_paper_doi 10.1039/C4CC01433B _journal_volume 50 _journal_year 2014 _chemical_formula_sum 'C12 H9 N5 S' _chemical_formula_weight 255.30 _chemical_melting_point 397 _space_group_IT_number 14 _symmetry_cell_setting monoclinic _symmetry_space_group_name_Hall '-P 2ybc' _symmetry_space_group_name_H-M 'P 1 21/c 1' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL-97 _cell_angle_alpha 90.00 _cell_angle_beta 106.326(2) _cell_angle_gamma 90.00 _cell_formula_units_Z 4 _cell_length_a 13.6633(4) _cell_length_b 3.84480(10) _cell_length_c 22.7022(7) _cell_measurement_reflns_used 9916 _cell_measurement_temperature 200(2) _cell_measurement_theta_max 28.27 _cell_measurement_theta_min 2.75 _cell_volume 1144.52(6) _computing_cell_refinement 'APEX II, Bruker (2009)' _computing_data_collection 'APEX II, Bruker (2009)' _computing_data_reduction 'XPREP, Bruker (2009)' _computing_molecular_graphics 'SHELXTL, Bruker (2004)' _computing_publication_material 'SHELXTL, Bruker (2004)' _computing_structure_refinement 'SHELXL-97 (Sheldrick, 2008)' _computing_structure_solution 'SHELXS-97 (Sheldrick, 2008)' _diffrn_ambient_temperature 200(2) _diffrn_measured_fraction_theta_full 0.985 _diffrn_measured_fraction_theta_max 0.985 _diffrn_measurement_device_type 'Bruker APEX-II CCD' _diffrn_measurement_method '\f and \w scans' _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0377 _diffrn_reflns_av_sigmaI/netI 0.0272 _diffrn_reflns_limit_h_max 17 _diffrn_reflns_limit_h_min -18 _diffrn_reflns_limit_k_max 5 _diffrn_reflns_limit_k_min -5 _diffrn_reflns_limit_l_max 30 _diffrn_reflns_limit_l_min -30 _diffrn_reflns_number 26465 _diffrn_reflns_theta_full 28.31 _diffrn_reflns_theta_max 28.31 _diffrn_reflns_theta_min 1.55 _exptl_absorpt_coefficient_mu 0.270 _exptl_absorpt_correction_T_max 0.9946 _exptl_absorpt_correction_T_min 0.9209 _exptl_absorpt_correction_type multi-scan _exptl_absorpt_process_details 'SADABS, Bruker (2003)' _exptl_crystal_colour brown _exptl_crystal_density_diffrn 1.482 _exptl_crystal_density_meas ? _exptl_crystal_density_method 'not measured' _exptl_crystal_description needle _exptl_crystal_F_000 528 _exptl_crystal_size_max 0.31 _exptl_crystal_size_mid 0.08 _exptl_crystal_size_min 0.02 _refine_diff_density_max 0.497 _refine_diff_density_min -0.323 _refine_diff_density_rms 0.058 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.043 _refine_ls_hydrogen_treatment constr _refine_ls_matrix_type full _refine_ls_number_parameters 163 _refine_ls_number_reflns 2799 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.043 _refine_ls_R_factor_all 0.0658 _refine_ls_R_factor_gt 0.0445 _refine_ls_shift/su_max 0.001 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.0627P)^2^+0.4490P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.1058 _refine_ls_wR_factor_ref 0.1183 _reflns_number_gt 2174 _reflns_number_total 2799 _reflns_threshold_expression >2sigma(I) _cod_data_source_file c4cc01433b2.cif _cod_data_source_block jb009 _cod_depositor_comments ; The following automatic conversions were performed: '_exptl_crystal_density_meas' value 'n/a' was changed to '?' - the value is perceived as not measured. Automatic conversion script Id: cif_fix_values 3008 2015-01-20 13:52:24Z robertas ; _cod_original_sg_symbol_H-M P2(1)/c _cod_database_code 7112615 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, y+1/2, -z+1/2' '-x, -y, -z' 'x, -y-1/2, z-1/2' loop_ _atom_site_label _atom_site_type_symbol _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_occupancy _atom_site_symmetry_multiplicity _atom_site_calc_flag _atom_site_refinement_flags S1 S 0.24362(3) 0.93676(13) 0.48907(2) 0.02969(15) Uani 1 1 d . N1 N 0.36015(11) 1.1022(4) 0.52424(7) 0.0264(3) Uani 1 1 d . N2 N 0.30199(11) 1.2051(5) 0.61157(6) 0.0314(4) Uani 1 1 d . H2A H 0.3233 1.3822 0.6459 0.038 Uiso 1 1 d R N3 N 0.16113(11) 1.1046(4) 0.52495(7) 0.0270(3) Uani 1 1 d . N4 N 0.48210(12) 1.4656(5) 0.67036(7) 0.0319(4) Uani 1 1 d . N5 N 0.17702(12) 1.4802(4) 0.67041(7) 0.0298(4) Uani 1 1 d . C1 C 0.37503(13) 1.2132(5) 0.57919(7) 0.0232(4) Uani 1 1 d . C2 C 0.19895(13) 1.2156(5) 0.57968(7) 0.0239(4) Uani 1 1 d . C3 C 0.47518(13) 1.3603(5) 0.61325(7) 0.0229(4) Uani 1 1 d . C4 C 0.55446(14) 1.3814(5) 0.58665(8) 0.0269(4) Uani 1 1 d . H4A H 0.5464 1.3020 0.5459 0.032 Uiso 1 1 calc R C5 C 0.64555(15) 1.5213(6) 0.62103(9) 0.0334(4) Uani 1 1 d . H5A H 0.7013 1.5448 0.6040 0.040 Uiso 1 1 calc R C6 C 0.65488(15) 1.6269(6) 0.68055(9) 0.0342(5) Uani 1 1 d . H6A H 0.7174 1.7189 0.7054 0.041 Uiso 1 1 calc R C7 C 0.57173(15) 1.5959(6) 0.70296(9) 0.0364(5) Uani 1 1 d . H7A H 0.5783 1.6711 0.7437 0.044 Uiso 1 1 calc R C8 C 0.13077(13) 1.3687(5) 0.61360(7) 0.0231(4) Uani 1 1 d . C9 C 0.02638(14) 1.3879(5) 0.58651(8) 0.0275(4) Uani 1 1 d . H9A H -0.0032 1.3029 0.5461 0.033 Uiso 1 1 calc R C10 C -0.03322(15) 1.5342(5) 0.62002(9) 0.0326(4) Uani 1 1 d . H10A H -0.1049 1.5549 0.6028 0.039 Uiso 1 1 calc R C11 C 0.01289(16) 1.6504(5) 0.67905(9) 0.0334(4) Uani 1 1 d . H11A H -0.0266 1.7490 0.7032 0.040 Uiso 1 1 calc R C12 C 0.11668(15) 1.6202(5) 0.70191(8) 0.0319(4) Uani 1 1 d . H12A H 0.1478 1.7029 0.7423 0.038 Uiso 1 1 calc R loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_23 _atom_site_aniso_U_13 _atom_site_aniso_U_12 S1 0.0285(3) 0.0307(3) 0.0289(2) -0.00718(18) 0.00655(17) -0.0024(2) N1 0.0250(8) 0.0270(8) 0.0269(7) -0.0019(6) 0.0069(6) 0.0017(6) N2 0.0201(7) 0.0518(11) 0.0226(7) 0.0032(7) 0.0062(6) 0.0010(7) N3 0.0242(7) 0.0268(8) 0.0290(7) -0.0016(6) 0.0060(6) -0.0027(6) N4 0.0265(8) 0.0466(10) 0.0219(7) -0.0026(7) 0.0056(6) 0.0033(7) N5 0.0273(8) 0.0370(9) 0.0249(7) 0.0008(6) 0.0070(6) -0.0029(7) C1 0.0225(8) 0.0244(9) 0.0225(8) 0.0036(7) 0.0059(6) 0.0037(7) C2 0.0224(8) 0.0247(9) 0.0241(8) 0.0048(7) 0.0058(6) -0.0022(7) C3 0.0222(8) 0.0228(9) 0.0233(8) 0.0028(6) 0.0059(6) 0.0037(7) C4 0.0263(9) 0.0300(10) 0.0258(8) 0.0002(7) 0.0100(7) 0.0021(8) C5 0.0272(10) 0.0364(11) 0.0388(10) 0.0009(8) 0.0127(8) -0.0023(8) C6 0.0251(9) 0.0346(11) 0.0384(10) -0.0037(8) 0.0016(8) -0.0004(8) C7 0.0313(10) 0.0477(13) 0.0280(9) -0.0082(8) 0.0046(7) 0.0011(9) C8 0.0241(8) 0.0207(9) 0.0250(8) 0.0038(6) 0.0077(6) -0.0026(7) C9 0.0245(9) 0.0299(10) 0.0271(8) 0.0015(7) 0.0056(7) -0.0024(8) C10 0.0253(9) 0.0354(11) 0.0372(10) 0.0033(8) 0.0088(7) 0.0028(8) C11 0.0378(11) 0.0305(11) 0.0359(10) 0.0012(8) 0.0170(8) 0.0048(9) C12 0.0366(10) 0.0329(11) 0.0263(8) -0.0017(7) 0.0093(7) -0.0018(9) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' S S 0.1246 0.1234 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle N3 S1 N1 107.16(8) C1 N1 S1 117.13(13) C2 N2 C1 119.61(14) C2 N3 S1 116.96(13) C3 N4 C7 117.03(16) C12 N5 C8 116.53(16) N1 C1 N2 124.38(16) N1 C1 C3 120.43(15) N2 C1 C3 115.19(14) N3 C2 N2 124.75(16) N3 C2 C8 119.67(15) N2 C2 C8 115.59(15) N4 C3 C4 123.75(16) N4 C3 C1 115.16(15) C4 C3 C1 121.08(15) C3 C4 C5 117.96(16) C6 C5 C4 119.25(18) C5 C6 C7 118.54(18) N4 C7 C6 123.45(17) N5 C8 C9 123.96(17) N5 C8 C2 115.56(15) C9 C8 C2 120.48(15) C10 C9 C8 118.00(17) C9 C10 C11 119.10(18) C12 C11 C10 118.66(18) N5 C12 C11 123.74(17) loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance S1 N3 1.6930(16) S1 N1 1.6919(16) N1 C1 1.279(2) N2 C2 1.391(2) N2 C1 1.396(2) N3 C2 1.278(2) N4 C3 1.336(2) N4 C7 1.338(2) N5 C12 1.346(3) N5 C8 1.337(2) C1 C3 1.482(2) C2 C8 1.487(2) C3 C4 1.383(2) C4 C5 1.379(3) C5 C6 1.382(3) C6 C7 1.374(3) C8 C9 1.387(2) C9 C10 1.381(3) C10 C11 1.385(3) C11 C12 1.371(3) loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion N3 S1 N1 C1 22.45(17) N1 S1 N3 C2 -22.28(17) S1 N1 C1 N2 0.2(3) S1 N1 C1 C3 179.70(13) C2 N2 C1 N1 -27.4(3) C2 N2 C1 C3 153.06(17) S1 N3 C2 N2 -0.6(3) S1 N3 C2 C8 179.52(12) C1 N2 C2 N3 27.7(3) C1 N2 C2 C8 -152.44(17) C7 N4 C3 C4 -0.5(3) C7 N4 C3 C1 179.15(17) N1 C1 C3 N4 -179.57(17) N2 C1 C3 N4 0.0(2) N1 C1 C3 C4 0.1(3) N2 C1 C3 C4 179.60(17) N4 C3 C4 C5 -0.4(3) C1 C3 C4 C5 180.00(17) C3 C4 C5 C6 1.4(3) C4 C5 C6 C7 -1.5(3) C3 N4 C7 C6 0.3(3) C5 C6 C7 N4 0.6(3) C12 N5 C8 C9 -0.5(3) C12 N5 C8 C2 179.90(16) N3 C2 C8 N5 -179.56(17) N2 C2 C8 N5 0.5(2) N3 C2 C8 C9 0.8(3) N2 C2 C8 C9 -179.11(16) N5 C8 C9 C10 0.7(3) C2 C8 C9 C10 -179.67(17) C8 C9 C10 C11 -0.9(3) C9 C10 C11 C12 0.9(3) C8 N5 C12 C11 0.4(3) C10 C11 C12 N5 -0.7(3) loop_ _cod_related_entry_id _cod_related_entry_database _cod_related_entry_code 1 PubChem 122231320