#------------------------------------------------------------------------------ #$Date: 2017-07-11 16:35:37 +0100 (Tue, 11 Jul 2017) $ #$Revision: 198637 $ #$URL: svn://www.crystallography.net/cod/cif/8/00/00/8000031.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/ # # All data on this site have been placed in the public domain by the # contributors. # data_8000031 loop_ _publ_author_name 'Takashi Komiyama' 'Satoshi Igarashi' 'Yoshimasa Hoshino' 'Yasuhiko Yukawa' _publ_section_title ; Changing Mixed-valence State of Hexacobalt Cluster by Substituting Central Metal Ion and by Electrochemical Reduction -- Different Mixed-valence States of [M{Co(prolinato)2}6]4+ (M \\db Ba2+ and La3+) ; _journal_issue 3 _journal_name_full 'Chemistry Letters' _journal_page_first 300 _journal_paper_doi 10.1246/cl.2005.300 _journal_volume 34 _journal_year 2005 _chemical_formula_sum 'C68 H120 Ba Cl4 Co6 N14 O40' _chemical_formula_weight 2406.51 _chemical_name_common ;hexakis{bis(L-prolinato)cobalt(II)}barium(II) tetramethylammonium perchlorate ; _space_group_IT_number 196 _symmetry_cell_setting cubic _symmetry_Int_Tables_number 196 _symmetry_space_group_name_Hall 'F 2 2 3' _symmetry_space_group_name_H-M 'F 2 3' _atom_sites_solution_primary heavy _atom_sites_solution_secondary difmap _cell_angle_alpha 90 _cell_angle_beta 90 _cell_angle_gamma 90 _cell_formula_units_Z 4 _cell_length_a 21.6417(4) _cell_length_b 21.6417(4) _cell_length_c 21.6417(4) _cell_measurement_reflns_used 48518 _cell_measurement_temperature 296.2 _cell_measurement_theta_max 32.6 _cell_measurement_theta_min 1.9 _cell_volume 10136.2(3) _computing_cell_refinement PROCESS-AUTO _computing_data_collection PROCESS-AUTO _computing_data_reduction 'teXsan Ver. 1.11' _computing_publication_material 'teXsan Ver. 1.11' _computing_structure_refinement 'teXsan Ver. 1.10' _computing_structure_solution 'DIRDIF94 (PATTY)' _diffrn_ambient_temperature 296.2 _diffrn_detector_area_resol_mean 10.00 _diffrn_measured_fraction_theta_full 1.0000 _diffrn_measured_fraction_theta_max 1.0000 _diffrn_measurement_device_type 'Rigaku RAXIS-IV Imaging Plate' _diffrn_measurement_method \w _diffrn_radiation_monochromator graphite _diffrn_radiation_type 'Mo K\a' _diffrn_radiation_wavelength 0.7107 _diffrn_reflns_av_R_equivalents 0.059 _diffrn_reflns_limit_h_max 32 _diffrn_reflns_limit_h_min -30 _diffrn_reflns_limit_k_max 32 _diffrn_reflns_limit_k_min -31 _diffrn_reflns_limit_l_max 32 _diffrn_reflns_limit_l_min -32 _diffrn_reflns_number 31025 _diffrn_reflns_theta_full 32.57 _diffrn_reflns_theta_max 32.57 _exptl_absorpt_coefficient_mu 1.533 _exptl_absorpt_correction_T_max 0.904 _exptl_absorpt_correction_T_min 0.871 _exptl_absorpt_correction_type integration _exptl_absorpt_process_details '(Higashi, 1999)' _exptl_crystal_colour pink _exptl_crystal_density_diffrn 1.577 _exptl_crystal_density_method 'not measured' _exptl_crystal_description tetrahedral _exptl_crystal_F_000 4928.00 _exptl_crystal_size_max 0.260 _exptl_crystal_size_mid 0.260 _exptl_crystal_size_min 0.260 _refine_diff_density_max 0.89 _refine_diff_density_min -0.71 _refine_ls_abs_structure_Flack 0.1(1) _refine_ls_extinction_coef 0.0008(1) _refine_ls_extinction_method 'Zachariasen(1967) type 2 Gaussian isotropic' _refine_ls_goodness_of_fit_ref 0.883 _refine_ls_hydrogen_treatment noref _refine_ls_number_parameters 80 _refine_ls_number_reflns 916 _refine_ls_R_factor_gt 0.0485 _refine_ls_shift/su_max 0.0102 _refine_ls_structure_factor_coef F _refine_ls_weighting_details 'w = 1/[\s^2^(Fo) + 0.00360|Fo|^2^]' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_ref 0.0639 _reflns_number_gt 916 _reflns_number_total 1657 _reflns_threshold_expression F^2^>3.0\s(F^2^) _cod_depositor_comments ; Marking attached hydrogen atoms. Antanas Vaitkus, 2017-07-11 ; _cod_original_sg_symbol_H-M 'F 2 3 ' _cod_original_formula_sum 'C68 H120 Ba Cl4 Co6 N14 O40 ' _cod_database_code 8000031 loop_ _symmetry_equiv_pos_as_xyz x,y,z z,x,y y,z,x x,-y,-z z,-x,-y y,-z,-x -x,y,-z -z,x,-y -y,z,-x -x,-y,z -z,-x,y -y,-z,x x,1/2+y,1/2+z z,1/2+x,1/2+y y,1/2+z,1/2+x x,1/2-y,1/2-z z,1/2-x,1/2-y y,1/2-z,1/2-x -x,1/2+y,1/2-z -z,1/2+x,1/2-y -y,1/2+z,1/2-x -x,1/2-y,1/2+z -z,1/2-x,1/2+y -y,1/2-z,1/2+x 1/2+x,y,1/2+z 1/2+z,x,1/2+y 1/2+y,z,1/2+x 1/2+x,-y,1/2-z 1/2+z,-x,1/2-y 1/2+y,-z,1/2-x 1/2-x,y,1/2-z 1/2-z,x,1/2-y 1/2-y,z,1/2-x 1/2-x,-y,1/2+z 1/2-z,-x,1/2+y 1/2-y,-z,1/2+x 1/2+x,1/2+y,z 1/2+z,1/2+x,y 1/2+y,1/2+z,x 1/2+x,1/2-y,-z 1/2+z,1/2-x,-y 1/2+y,1/2-z,-x 1/2-x,1/2+y,-z 1/2-z,1/2+x,-y 1/2-y,1/2+z,-x 1/2-x,1/2-y,z 1/2-z,1/2-x,y 1/2-y,1/2-z,x loop_ _atom_site_label _atom_site_type_symbol _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_occupancy _atom_site_calc_flag _atom_site_refinement_flags _atom_site_attached_hydrogens Ba(1) Ba 0.0000 0.0000 0.0000 0.03145(5) Uani 1.00 d SP 0 Co(1) Co 0.17311(5) 0.0000 0.0000 0.0431(3) Uani 1.00 d S 0 Cl(1) Cl 0.3747 0.3747 0.3747 0.0931 Uani 1.00 d SP 0 O(1) O 0.1102(2) 0.0717(2) -0.0007(5) 0.044(1) Uani 1.00 d . 0 O(2) O 0.0979(2) 0.1738(2) 0.0024(6) 0.056(1) Uani 1.00 d . 0 O(3) O 0.3267 0.4048 0.3735 0.1997 Uani 1.00 d . 0 O(4) O 0.4070 0.4070 0.4070 0.2843 Uani 1.00 d SP 0 N(1) N 0.2358(3) 0.0766(3) 0.0039(7) 0.057(2) Uani 1.00 d . 0 N(2) N 0.2500 0.2500 0.2500 0.0880 Uani 1.00 d SP 0 N(3) N 0.5000 0.5000 0.5000 0.0593 Uani 1.00 d SP 0 C(1) C 0.1305(3) 0.1250(3) 0.0017(7) 0.050(2) Uani 1.00 d . 0 C(2) C 0.1998(4) 0.1358(4) 0.002(2) 0.089(3) Uani 1.00 d . 0 C(3) C 0.223(1) 0.167(1) -0.050(2) 0.32(2) Uani 1.00 d . 0 C(4) C 0.283(1) 0.146(1) -0.063(2) 0.19(1) Uani 1.00 d . 0 C(5) C 0.2807(7) 0.0822(8) -0.0445(9) 0.113(6) Uani 1.00 d . 0 C(6) C 0.2179 0.2179 0.2179 0.1421 Uani 1.00 d SP 3 C(7) C 0.5394 0.5394 0.5394 0.0865 Uani 1.00 d SP 3 H(1) H 0.2576 0.0734 0.0435 0.0672 Uiso 1.00 calc . 0 H(2) H 0.2103 0.1598 0.0418 0.0998 Uiso 1.00 calc . 0 H(3) H 0.1937 0.1584 -0.0842 0.3216 Uiso 1.00 calc . 0 H(4) H 0.2230 0.2107 -0.0450 0.3216 Uiso 1.00 calc . 0 H(5) H 0.2880 0.1472 -0.1088 0.2279 Uiso 1.00 calc . 0 H(6) H 0.3113 0.1677 -0.0442 0.2279 Uiso 1.00 calc . 0 H(7) H 0.3213 0.0694 -0.0310 0.1190 Uiso 1.00 calc . 0 H(8) H 0.2698 0.0540 -0.0784 0.1190 Uiso 1.00 calc . 0 loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 Ba(1) 0.0314(3) 0.0314 0.0314 0.0000 0.0000 0.0000 Co(1) 0.0319(5) 0.0468(6) 0.0506(6) 0.0000 0.0000 0.003(2) Cl(1) 0.0931 0.0931 0.0931 -0.0060 -0.0060 -0.0060 O(1) 0.037(2) 0.040(2) 0.055(2) -0.003(2) 0.012(5) -0.002(6) O(2) 0.050(2) 0.042(2) 0.075(3) -0.004(2) -0.001(6) -0.010(7) O(3) 0.1700 0.2254 0.2038 0.0705 0.0147 0.0247 O(4) 0.2843 0.2843 0.2843 -0.0741 -0.0741 -0.0741 N(1) 0.034(2) 0.065(4) 0.073(5) -0.010(2) 0.006(6) -0.003(8) N(2) 0.0880 0.0880 0.0880 0.0000 0.0000 0.0000 N(3) 0.0593 0.0593 0.0593 0.0000 0.0000 0.0000 C(1) 0.040(3) 0.048(3) 0.063(4) -0.008(3) 0.000(8) -0.026(8) C(2) 0.049(4) 0.055(4) 0.16(1) -0.021(4) 0.00(2) -0.02(1) C(3) 0.10(1) 0.20(2) 0.66(8) 0.04(2) 0.13(3) 0.31(4) C(4) 0.14(2) 0.11(1) 0.31(3) -0.01(1) 0.07(2) 0.10(2) C(5) 0.075(8) 0.12(1) 0.15(1) -0.024(8) 0.045(9) -0.04(1) C(6) 0.1421 0.1421 0.1421 0.0123 0.0123 0.0123 C(7) 0.0865 0.0865 0.0865 -0.0217 -0.0217 -0.0217 loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source Ba Ba -0.324 2.282 ;International Tables for Crystallography (1992, Vol. C, Tables 4.2.6.8 and 6.1.1.1) ; Co Co 0.349 0.972 ;International Tables for Crystallography (1992, Vol. C, Tables 4.2.6.8 and 6.1.1.1) ; Cl Cl 0.148 0.159 ;International Tables for Crystallography (1992, Vol. C, Tables 4.2.6.8 and 6.1.1.1) ; O O 0.011 0.006 ;International Tables for Crystallography (1992, Vol. C, Tables 4.2.6.8 and 6.1.1.1) ; N N 0.006 0.003 ;International Tables for Crystallography (1992, Vol. C, Tables 4.2.6.8 and 6.1.1.1) ; C C 0.003 0.002 ;International Tables for Crystallography (1992, Vol. C, Tables 4.2.6.8 and 6.1.1.1) ; H H 0.000 0.000 ;International Tables for Crystallography (1992, Vol. C, Table 6.1.1.2) ; loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_site_symmetry_1 _geom_angle_site_symmetry_3 _geom_angle_publ_flag O(1) Ba(1) O(1) 63.3(4) . 2_555 yes O(1) Ba(1) O(1) 63.3(4) . 3_555 yes O(1) Ba(1) O(1) 66.1(2) . 4_555 yes O(1) Ba(1) O(1) 117.29(9) . 5_555 yes O(1) Ba(1) O(1) 62.3(4) . 6_555 yes O(1) Ba(1) O(1) 113.9(2) . 7_555 yes O(1) Ba(1) O(1) 62.3(4) . 8_555 yes O(1) Ba(1) O(1) 117.10(8) . 9_555 yes O(1) Ba(1) O(1) 179.4(5) . 10_555 yes O(1) Ba(1) O(1) 117.10(8) . 11_555 yes O(1) Ba(1) O(1) 117.29(9) . 12_555 yes O(1) Ba(1) O(1) 63.3(4) 2_555 3_555 yes O(1) Ba(1) O(1) 117.29(9) 2_555 4_555 yes O(1) Ba(1) O(1) 179.4(5) 2_555 5_555 yes O(1) Ba(1) O(1) 117.10(8) 2_555 6_555 yes O(1) Ba(1) O(1) 62.3(4) 2_555 7_555 yes O(1) Ba(1) O(1) 66.1(2) 2_555 8_555 yes O(1) Ba(1) O(1) 117.29(9) 2_555 9_555 yes O(1) Ba(1) O(1) 117.10(8) 2_555 10_555 yes O(1) Ba(1) O(1) 113.9(2) 2_555 11_555 yes O(1) Ba(1) O(1) 62.3(4) 2_555 12_555 yes O(1) Ba(1) O(1) 62.3(4) 3_555 4_555 yes O(1) Ba(1) O(1) 117.10(8) 3_555 5_555 yes O(1) Ba(1) O(1) 113.9(2) 3_555 6_555 yes O(1) Ba(1) O(1) 117.10(8) 3_555 7_555 yes O(1) Ba(1) O(1) 117.29(9) 3_555 8_555 yes O(1) Ba(1) O(1) 179.4(5) 3_555 9_555 yes O(1) Ba(1) O(1) 117.29(9) 3_555 10_555 yes O(1) Ba(1) O(1) 62.3(4) 3_555 11_555 yes O(1) Ba(1) O(1) 66.1(2) 3_555 12_555 yes O(1) Ba(1) O(1) 63.3(4) 4_555 5_555 yes O(1) Ba(1) O(1) 63.3(4) 4_555 6_555 yes O(1) Ba(1) O(1) 179.4(5) 4_555 7_555 yes O(1) Ba(1) O(1) 117.10(8) 4_555 8_555 yes O(1) Ba(1) O(1) 117.29(9) 4_555 9_555 yes O(1) Ba(1) O(1) 113.9(2) 4_555 10_555 yes O(1) Ba(1) O(1) 62.3(4) 4_555 11_555 yes O(1) Ba(1) O(1) 117.10(8) 4_555 12_555 yes O(1) Ba(1) O(1) 63.3(4) 5_555 6_555 yes O(1) Ba(1) O(1) 117.10(8) 5_555 7_555 yes O(1) Ba(1) O(1) 113.9(2) 5_555 8_555 yes O(1) Ba(1) O(1) 62.3(4) 5_555 9_555 yes O(1) Ba(1) O(1) 62.3(4) 5_555 10_555 yes O(1) Ba(1) O(1) 66.1(2) 5_555 11_555 yes O(1) Ba(1) O(1) 117.29(9) 5_555 12_555 yes O(1) Ba(1) O(1) 117.29(9) 6_555 7_555 yes O(1) Ba(1) O(1) 62.3(4) 6_555 8_555 yes O(1) Ba(1) O(1) 66.1(2) 6_555 9_555 yes O(1) Ba(1) O(1) 117.10(8) 6_555 10_555 yes O(1) Ba(1) O(1) 117.29(9) 6_555 11_555 yes O(1) Ba(1) O(1) 179.4(5) 6_555 12_555 yes O(1) Ba(1) O(1) 63.3(4) 7_555 8_555 yes O(1) Ba(1) O(1) 63.3(4) 7_555 9_555 yes O(1) Ba(1) O(1) 66.1(2) 7_555 10_555 yes O(1) Ba(1) O(1) 117.29(9) 7_555 11_555 yes O(1) Ba(1) O(1) 62.3(4) 7_555 12_555 yes O(1) Ba(1) O(1) 63.3(4) 8_555 9_555 yes O(1) Ba(1) O(1) 117.29(9) 8_555 10_555 yes O(1) Ba(1) O(1) 179.4(5) 8_555 11_555 yes O(1) Ba(1) O(1) 117.10(8) 8_555 12_555 yes O(1) Ba(1) O(1) 62.3(4) 9_555 10_555 yes O(1) Ba(1) O(1) 117.10(8) 9_555 11_555 yes O(1) Ba(1) O(1) 113.9(2) 9_555 12_555 yes O(1) Ba(1) O(1) 63.3(4) 10_555 11_555 yes O(1) Ba(1) O(1) 63.3(4) 10_555 12_555 yes O(1) Ba(1) O(1) 63.3(4) 11_555 12_555 yes O(1) Co(1) O(1) 97.5(2) . 4_555 yes O(1) Co(1) O(2) 89.7(4) . 3_555 yes O(1) Co(1) O(2) 90.9(4) . 6_555 yes O(1) Co(1) N(1) 80.6(2) . . yes O(1) Co(1) N(1) 176.7(5) . 4_555 yes O(1) Co(1) O(2) 90.9(4) 4_555 3_555 yes O(1) Co(1) O(2) 89.7(4) 4_555 6_555 yes O(1) Co(1) N(1) 176.7(5) 4_555 . yes O(1) Co(1) N(1) 80.6(2) 4_555 4_555 yes O(2) Co(1) O(2) 179.2(3) 3_555 6_555 yes O(2) Co(1) N(1) 86.4(5) 3_555 . yes O(2) Co(1) N(1) 93.0(5) 3_555 4_555 yes O(2) Co(1) N(1) 93.0(5) 6_555 . yes O(2) Co(1) N(1) 86.4(5) 6_555 4_555 yes N(1) Co(1) N(1) 101.5(4) . 4_555 yes O(3) Cl(1) O(3) 116.3664(4) . 2_555 yes O(3) Cl(1) O(3) 116.3664(5) . 3_555 yes O(3) Cl(1) O(4) 101.1296(8) . . yes O(3) Cl(1) O(3) 116.3663(1) 2_555 3_555 yes O(3) Cl(1) O(4) 101.1 2_555 . yes O(3) Cl(1) O(4) 101.1296(8) 3_555 . yes Ba(1) O(1) Co(1) 98.2(2) . . yes Ba(1) O(1) C(1) 143.7(4) . . yes Co(1) O(1) C(1) 117.9(4) . . yes Co(1) O(2) C(1) 123.3(4) 2_555 . yes Co(1) N(1) C(2) 109.3(4) . . yes Co(1) N(1) C(5) 117.8(9) . . yes Co(1) N(1) H(1) 106.6 . . no C(2) N(1) C(5) 104(1) . . yes C(2) N(1) H(1) 109.5 . . no C(5) N(1) H(1) 108.5 . . no C(6) N(2) C(6) 109.471(1) . 16_555 yes C(6) N(2) C(6) 109.4713(5) . 31_555 yes C(6) N(2) C(6) 109.4712(5) . 46_555 yes C(6) N(2) C(6) 109.4712(5) 16_555 31_555 yes C(6) N(2) C(6) 109.4712(5) 16_555 46_555 yes C(6) N(2) C(6) 109.471(1) 31_555 46_555 yes C(7) N(3) C(7) 109.471(1) . 4_566 yes C(7) N(3) C(7) 109.4713(5) . 7_656 yes C(7) N(3) C(7) 109.4712(5) . 10_665 yes C(7) N(3) C(7) 109.4712(5) 4_566 7_656 yes C(7) N(3) C(7) 109.4712(5) 4_566 10_665 yes C(7) N(3) C(7) 109.471(1) 7_656 10_665 yes O(1) C(1) O(2) 125.5(6) . . yes O(1) C(1) C(2) 119.6(6) . . yes O(2) C(1) C(2) 114.9(6) . . yes N(1) C(2) C(1) 112.5(6) . . yes N(1) C(2) C(3) 104(1) . . yes N(1) C(2) H(2) 106.9 . . no C(1) C(2) C(3) 115(2) . . yes C(1) C(2) H(2) 107.3 . . no C(3) C(2) H(2) 110.7 . . no C(2) C(3) C(4) 109(2) . . yes C(2) C(3) H(3) 106.7 . . no C(2) C(3) H(4) 112.5 . . no C(4) C(3) H(3) 113.0 . . no C(4) C(3) H(4) 109.7 . . no H(3) C(3) H(4) 105.5 . . no C(3) C(4) C(5) 102(1) . . yes C(3) C(4) H(5) 106.2 . . no C(3) C(4) H(6) 112.5 . . no C(5) C(4) H(5) 108.0 . . no C(5) C(4) H(6) 115.1 . . no H(5) C(4) H(6) 111.7 . . no N(1) C(5) C(4) 108(1) . . yes N(1) C(5) H(7) 111.8 . . no N(1) C(5) H(8) 109.3 . . no C(4) C(5) H(7) 108.9 . . no C(4) C(5) H(8) 113.5 . . no H(7) C(5) H(8) 105.3 . . no loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance _geom_bond_site_symmetry_2 _geom_bond_publ_flag Ba(1) O(1) 2.846(4) . yes Ba(1) O(1) 2.846(4) 2_555 yes Ba(1) O(1) 2.846(4) 3_555 yes Ba(1) O(1) 2.846(4) 4_555 yes Ba(1) O(1) 2.846(4) 5_555 yes Ba(1) O(1) 2.846(4) 6_555 yes Ba(1) O(1) 2.846(4) 7_555 yes Ba(1) O(1) 2.846(4) 8_555 yes Ba(1) O(1) 2.846(4) 9_555 yes Ba(1) O(1) 2.846(4) 10_555 yes Ba(1) O(1) 2.846(4) 11_555 yes Ba(1) O(1) 2.846(4) 12_555 yes Co(1) O(1) 2.063(4) . yes Co(1) O(1) 2.063(4) 4_555 yes Co(1) O(2) 2.120(5) 3_555 yes Co(1) O(2) 2.120(5) 6_555 yes Co(1) N(1) 2.144(6) . yes Co(1) N(1) 2.144(6) 4_555 yes Cl(1) O(3) 1.227 . yes Cl(1) O(3) 1.227 2_555 yes Cl(1) O(3) 1.227 3_555 yes Cl(1) O(4) 1.214 . yes O(1) C(1) 1.236(8) . yes O(2) C(1) 1.269(8) . yes N(1) C(2) 1.50(1) . yes N(1) C(5) 1.43(2) . yes N(1) H(1) 0.980 . no N(2) C(6) 1.205 . yes N(2) C(6) 1.205 16_555 yes N(2) C(6) 1.205 31_555 yes N(2) C(6) 1.205 46_555 yes N(3) C(7) 1.478 . yes N(3) C(7) 1.478 4_566 yes N(3) C(7) 1.478 7_656 yes N(3) C(7) 1.478 10_665 yes C(1) C(2) 1.517(9) . yes C(2) C(3) 1.40(4) . yes C(2) H(2) 1.034 . no C(3) C(4) 1.41(3) . yes C(3) H(3) 0.987 . no C(3) H(4) 0.962 . no C(4) C(5) 1.43(3) . yes C(4) H(5) 1.002 . no C(4) H(6) 0.871 . no C(5) H(7) 0.967 . no C(5) H(8) 0.984 . no loop_ _geom_contact_atom_site_label_1 _geom_contact_atom_site_label_2 _geom_contact_distance _geom_contact_site_symmetry_2 _geom_contact_publ_flag Ba(1) Co(1) 3.746(1) . yes Co(1) Co(1) 5.298(1) 2_555 yes Co(1) Co(1) 7.493(2) 7_555 yes